prot_C-tenellus_contig7157.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7157.3.1
Unique Nameprot_C-tenellus_contig7157.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length267
Homology
BLAST of mRNA_C-tenellus_contig7157.3.1 vs. uniprot
Match: A0A6V1NP11_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NP11_HETAK)

HSP 1 Score: 130 bits (327), Expect = 6.080e-32
Identity = 83/238 (34.87%), Postives = 112/238 (47.06%), Query Frame = 0
Query:   17 LSDNMSIVYSLCFMYLGGSALYGGLLVPYSKIPGLARIIYFTAVPAVTQRALLINDFMCCYLTFTCDDVTSSFPHEVPGNFSKPGGVSSTNLHDTAATAVAGAGPI-DGFCPPDLQATADGTQAGNLGRLYLEGLDLMEVDNYILLFTLFCVAVGARVAASVVLKAREAFAERLIEVDTGVSRQR-----LIGLIQGEFEYRGGGGSERRDREQVGNIDLEGRFAAKGVEVEMASFNL 248
            +SD++   Y+L F+ LGG AL+GG+L+   KIP   R +Y  +VPA+TQRALL+ND +CCYLT TC D+                                 AGP    FCPP LQ T DGT+ GNLGRL L+ L L + DNY LL  LF  A+  R A    L  R  F ++L+  D  +  +R     L      + +      S+ R R   G +  +G        +  A  N 
Sbjct:  139 ISDDIKNTYNLGFLILGGGALFGGILIKLEKIPWFFRWVYHLSVPALTQRALLVNDLLCCYLTATCQDLGRQL-----------------------------AGPQGQAFCPPGLQITGDGTERGNLGRLALKALSLDQADNYALLLALFAAALAGRAAQLGALALRARFEDQLVHDDGYLEDERESKTWLSSSAPSQHQL-----SKNRKRPSSGELYYDGANTNNSTPISSAQSNF 342          
BLAST of mRNA_C-tenellus_contig7157.3.1 vs. uniprot
Match: A0A7S2S756_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S756_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.020e-29
Identity = 80/194 (41.24%), Postives = 110/194 (56.70%), Query Frame = 0
Query:   16 MLSDNMSIVYSLCFMYLGGSALYGGLLVPYSKIPGLARIIYFTAVPAVTQRALLINDFMCCYLTFTC-DDVTSSFPHEVPGNFSKPGG--VSSTNLHDTAATAVAGAGPIDGFCPPDLQATADGTQAGNLGRLYLEGLDLMEVDNYILLFTLFCVAVGARVAASVVLKAREAFAERLIEVDTGVSRQRLIGLIQ 206
            M S ++++V+   F+ LGG  L+GGLLV +S IP   + +Y+ +V AVTQRAL++NDF+CCYLT++C D V     H VP       G  V+S  +  ++AT           CP    A       GNLGR  L+ L+L +VDNY  L TLFCVAV ARVAA +VL  R+ +      VD   +R R   L++
Sbjct:   47 MSSRHIAVVHLFIFLLLGGGTLFGGLLVSFSNIPPYFQPLYYVSVTAVTQRALVVNDFLCCYLTYSCTDSVDELLQHHVPKAVVHLNGSAVTSDQILQSSAT----------LCPEGFDAGK-----GNLGRYALKLLELSDVDNYAALLTLFCVAVLARVAAVLVLWVRDWWEHGTTMVDGDRTRFRQEELVR 225          
BLAST of mRNA_C-tenellus_contig7157.3.1 vs. uniprot
Match: A0A482S3R5_9ARCH (ABC transporter permease (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S3R5_9ARCH)

HSP 1 Score: 104 bits (259), Expect = 1.180e-22
Identity = 57/136 (41.91%), Postives = 77/136 (56.62%), Query Frame = 0
Query:   13 LLCMLSDNMSIVYSLCFMYLGGSALYGGLLVPYSKIPGLARIIYFTAVPAVTQRALLINDFMCCYLTFTCDDVTSSFPHEVPGNFSKPGGVSSTNLHDTAATAVAGAGPID-GFCPPDLQATADGTQAGNLGRLYL 147
            L+ M +D +++ YS  F+ LG   L+GGLLV YSKIP + R +Y+ +V AVTQRAL+ ND  CCYLT TC+ + +S            G    T     A  + +    +   FCP  LQ + DG+  GNLGRLYL
Sbjct:  172 LVAMTTDVIAVAYSTLFLILGSGTLFGGLLVRYSKIPIIFRWLYYVSVAAVTQRALIANDLRCCYLTTTCNSIANSLHLNPSSEHESQGSYFDTYTPYYAFNSSSEQDEVQPAFCPAGLQFSGDGSDVGNLGRLYL 307          
BLAST of mRNA_C-tenellus_contig7157.3.1 vs. uniprot
Match: A0A7S3MIK5_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MIK5_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.560e-8
Identity = 46/168 (27.38%), Postives = 75/168 (44.64%), Query Frame = 0
Query:   16 MLSDNMSIVYSL-CFMYLGGSALYGGLLVPYSKIPGLARIIYFTAVPAVTQRALLINDFMCCYLTFTCDDVTSSFPHEVPGNFSKPGGVSSTNLHDTAATAVAGAGPIDGFCPPDLQATADGTQAGNLGRLYLEGLDLMEVDNYILLFTLFCVAVGARVAASVVLKAR 182
            +L   M + +S+   M + G+ L  G+ +   ++P     + + ++ A+ QRAL++ND  CCYL+ TC ++     +E+                                CP  L  T DGT  GNLGR YL+ + + +   ++LLF LF V    RV    +L  R
Sbjct:  401 LLRPRMVVCWSVVALMLVVGTWLGSGMFLSLQELPSAFSYVPYVSLSAMLQRALVVNDLHCCYLSTTCAELAQE--NELT-------------------------------CPKSLHFTGDGTDEGNLGRYYLQTVGMGDERPHMLLFLLFWVNAILRVVTIFILGRR 535          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7157.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6V1NP11_HETAK6.080e-3234.87Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2S756_9STRA1.020e-2941.24Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482S3R5_9ARCH1.180e-2241.91ABC transporter permease (Fragment) n=1 Tax=archae... [more]
A0A7S3MIK5_9STRA4.560e-827.38Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 180..266
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..179
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 81..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7157contigC-tenellus_contig7157:4028..6088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7157.3.1mRNA_C-tenellus_contig7157.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7157 3983..6718 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7157.3.1 ID=prot_C-tenellus_contig7157.3.1|Name=mRNA_C-tenellus_contig7157.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=267bp
MLDPMCLHLAEALLCMLSDNMSIVYSLCFMYLGGSALYGGLLVPYSKIPG
LARIIYFTAVPAVTQRALLINDFMCCYLTFTCDDVTSSFPHEVPGNFSKP
GGVSSTNLHDTAATAVAGAGPIDGFCPPDLQATADGTQAGNLGRLYLEGL
DLMEVDNYILLFTLFCVAVGARVAASVVLKAREAFAERLIEVDTGVSRQR
LIGLIQGEFEYRGGGGSERRDREQVGNIDLEGRFAAKGVEVEMASFNLAG
TRGERYQRERKPGQNT*
back to top