prot_C-tenellus_contig7154.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7154.2.1
Unique Nameprot_C-tenellus_contig7154.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length338
Homology
BLAST of mRNA_C-tenellus_contig7154.2.1 vs. uniprot
Match: D8LES9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LES9_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 5.010e-110
Identity = 171/331 (51.66%), Postives = 231/331 (69.79%), Query Frame = 0
Query:    1 MTQTSGMIVLFGVLAMVPAVLDLIAISGDNVDWNGEPNKAFPPIVGLIANIVVVIFGFSSVFIGFQYLASQWGSKAASTFGLFITLLAWFPFWATVANIGFSAENNLTTGG--PLVIDPVIYAPTESEVNGIAVLGILSFYGYAGTVSDLGCALTFLHWKSWKFHSGEASIYNAGYYRSREGYYGFLSCLVGICQMTLGAFIIERFGDGQLPAPIAVGPFFVLFPEISVAVGLSQLLLGFYILARSKTPAVLWSSSPTEPMKDNGLFLFQLVAWFVMIFSITAQVIGQVALHSANGPGIMVVNVIGFGIFPIYLDVMAHTTPEVISEEMYS 329
            +T TSG+I+ +G++ ++   +DL A S   VDW+G  +  FPPI  L+A + V +FG  S+F+GFQY+AS+WGSK  S FGL ITL AWFPF  TVA I F A++    GG  PL I     + ++ E+N IA++GIL F+GYAGTV     ALTFL WK ++F  G AS Y+A YYRSR GYYGFLS +VG  Q+ LG+F+   FG GQLP+P+  GPFF+L+PE+S+ VG+ Q+L GFYIL RS TP V     P+   KD G+F FQ+VAW V + S+ AQV+GQV+L ++  P + + NVIGF +FPIYLDV++HTTPE ++ +M+S
Sbjct:   21 LTTTSGLILAYGIIVIIGGTVDLTAASAKGVDWSGS-DGVFPPIAILLAQLTVTLFGLVSMFLGFQYVASRWGSKVTSLFGLGITLAAWFPFLTTVALIAFQADHGNVGGGAGPLQILHPTISVSQGEINSIALMGILGFWGYAGTVIG---ALTFLQWKMYRFFQGGASTYSATYYRSRLGYYGFLSLMVGALQVALGSFVEGMFGWGQLPSPVVSGPFFILWPELSITVGVCQVLFGFYILYRSTTPGV----GPSTGNKDAGMFKFQVVAWSVFLISMGAQVLGQVSLAASAMPALFIRNVIGFALFPIYLDVLSHTTPENVTPDMFS 343          
BLAST of mRNA_C-tenellus_contig7154.2.1 vs. uniprot
Match: A0A7S2UB49_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB49_9STRA)

HSP 1 Score: 140 bits (354), Expect = 4.370e-35
Identity = 100/336 (29.76%), Postives = 158/336 (47.02%), Query Frame = 0
Query:    3 QTSGMIVLFGVLAMVPAVLDLIAISGDNVDWNGEPNKAFPPIVGLIANIVVVIFGFSSVFIGFQYLASQWGSKAASTFGLFITLLAWFPFWATVANIGFSAENNLTTGGPLVIDPVIYAPTESEVNGIAVLGILSFYGYAGTVSDLGCALTFLHWKSWKFHSGEASIYNAGYYRSREGYYGFLSCLVGICQMTLGAFIIERFGDGQLP-APIAVGPFFVLFPEISVAVGLSQLLLGFYILARSKTPAVLWSSSPTEPMKDNGLFLFQLVAWFVMIFSITAQVIGQVALHSANGPGIMVVN--------VIGFGIFPIYLDVMAHTTPEVISEEMYS 329
            Q  G+I   G+LA   +++++     + V  NG  +K+  P+  LIA      FG  ++F G+  L   WG K+ +   +  T LAW P+   ++ I   A N+          P  Y P+E+++N +A +G+L    +         +L F+ +  + + SG+ +  N+ YY  R G Y FL  L G  Q+ LG+F++   G+G L   P+ VG + + FPEISV VGL Q+L+GF+ LAR     V          KD+  F  Q+    + I  +  +++ QVA      PG M+          + G    P YLD    TTP  +    YS
Sbjct:   29 QFGGLIFALGILATFGSLINI----ANEVGPNGTTSKSGVPLSNLIAGCAQAFFGTIAMFTGYLSLVYDWGHKSLTLALIIATQLAWLPYLTALSGIAKGARNDSFI-------PSAYDPSEADINFVAAMGMLGIIAHGAAYIG---SLAFMEFALYAYQSGKTNDRNSSYYLGRSGLYNFLVVLAGFSQLALGSFVLHSIGNGPLTEGPVNVGVYTIYFPEISVFVGLVQILVGFFGLARRMGKLV--------GGKDDHSF--QIACGIMWICMLVLELMVQVAY----APGPMMGGAAPTRACIIFGLAFMPAYLDAKTRTTPAELPPSYYS 336          
BLAST of mRNA_C-tenellus_contig7154.2.1 vs. uniprot
Match: K0TGC2_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TGC2_THAOC)

HSP 1 Score: 102 bits (255), Expect = 3.770e-21
Identity = 85/332 (25.60%), Postives = 147/332 (44.28%), Query Frame = 0
Query:    5 SGMIVLFGVLAMVPAVLDLIAISGDNVDWNGEPNKAFPPIVGLIANIVVVIFGFSSVFIGFQYLASQWGSKAASTFGLFITLLAWFPFWATVANIGFSAENNLTTGGPLVIDPVIYAPTESEVNGIAVLGILSFYGYAGTVSDLGCALTF-LHWKSWKFHSGEASIYNAGYYRSREGYYGFLSCLVGICQMTLGAFIIERFGDGQLPAPIAVGPFFVLFPEISVAVGLSQLLLGFYILARSKTPAVLWSSSPTEPMKDNGLFLFQLVAWFVMIFSITAQVIGQVALH----SANGPGIMVVNVIGFGIFPIYLDVMAHTTPEVISEEMYSSV 331
            SG+++  G+ A   A  D+++++        +  K+  P+  LIA +    FG + + +GF       GS   +T       LAW PF   ++ IG    ++  +  P +  P +Y P+ + V  +  +  L    YA         ++F +H       +G+    +  Y+R R   Y  L  L G+ Q+ LG+FII  +G+G L API    F V  PEISV +GL Q+++    + RS            +P  D+    FQ + +F+    ++ QV+ QVA      +A+    +    +G  + P +LD   +  PE +    Y  +
Sbjct:   27 SGLLLTLGLCAAYGAFADIVSLA--------DTAKSGLPLATLIAAVFQGFFGLTCMGVGFTGAVMDKGSTLLTTIAASSIQLAWMPFLVGLSTIGMGIVSD-PSENPFI--PALYDPSAAAVKFVGSMAFLGLMSYAIGFIXXXXXMSFSMH----SIQAGKPQDRSGVYFRGRAKLYNGLLFLAGLVQLALGSFIINTYGNGPLEAPIFAVVFLVFSPEISVTIGLLQMIVSTIGIVRSLRE---------KPAPDS--VWFQTLCFFMYFCMMSMQVLAQVAQAPGDAAASAAPTLACVYLGIALMPAFLDWKMNNLPEDLDAVNYYGI 332          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7154.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LES9_ECTSI5.010e-11051.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UB49_9STRA4.370e-3529.76Hypothetical protein n=1 Tax=Attheya septentrional... [more]
K0TGC2_THAOC3.770e-2125.60Uncharacterized protein n=2 Tax=Thalassiosira ocea... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 296..314
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 315..337
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 181..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 263..284
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 243..262
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..180
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 202..220
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 69..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 285..295
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 102..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 221..242
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7154contigC-tenellus_contig7154:2642..4753 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7154.2.1mRNA_C-tenellus_contig7154.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7154 1553..4816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7154.2.1 ID=prot_C-tenellus_contig7154.2.1|Name=mRNA_C-tenellus_contig7154.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=338bp
MTQTSGMIVLFGVLAMVPAVLDLIAISGDNVDWNGEPNKAFPPIVGLIAN
IVVVIFGFSSVFIGFQYLASQWGSKAASTFGLFITLLAWFPFWATVANIG
FSAENNLTTGGPLVIDPVIYAPTESEVNGIAVLGILSFYGYAGTVSDLGC
ALTFLHWKSWKFHSGEASIYNAGYYRSREGYYGFLSCLVGICQMTLGAFI
IERFGDGQLPAPIAVGPFFVLFPEISVAVGLSQLLLGFYILARSKTPAVL
WSSSPTEPMKDNGLFLFQLVAWFVMIFSITAQVIGQVALHSANGPGIMVV
NVIGFGIFPIYLDVMAHTTPEVISEEMYSSVSAKNFA*
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