prot_C-tenellus_contig7001.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7001.1.1
Unique Nameprot_C-tenellus_contig7001.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length174
Homology
[Close]
BLAST of mRNA_C-tenellus_contig7001.1.1 vs. uniprot
Match: D8LRM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM2_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 6.690e-25
Identity = 90/175 (51.43%), Postives = 118/175 (67.43%), Query Frame = 0 
Query:    8 IQSDGQRRLAESEAQQKASERSYERSMAALRDDLHRKLEEEEARRVREVGEARRKSKAVAGALQLLQGELRESEAKGSELEGQVSALSARNRNGSIIRGSGVGVTSGTGGSAXXXXXXXXXXX----------EATEAEIATLRRQLQAAMNAKDLAEKVVKEAKSRAEEEGTRR 172
            +++   RR  E+EA  +A ER+++R++ A+R++  +KL EEEARRVREV +AR+KSKAV  ALQ LQGEL +SEAKGS LE QVS LSAR         +  G   G G SAXXXXXXXXXXX          E TEAE+ +LRRQ++AA  AK+ A++   EA+ RA+EE  +R
Sbjct:  608 METHADRRFMEAEASHRAVERNHDRALVAIREEAKKKLLEEEARRVREVSDARKKSKAVVEALQTLQGELTQSEAKGSGLERQVSQLSARMSRAGSSSVAPAGGNGGDGSSAXXXXXXXXXXXXXXSSGARGSEVTEAEMTSLRRQMKAATEAKETAQRSALEARLRADEETKKR 782
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7001.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRM2_ECTSI6.690e-2551.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 130..164
NoneNo IPR availableCOILSCoilCoilcoord: 70..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7001contigC-tenellus_contig7001:405..2215 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7001.1.1mRNA_C-tenellus_contig7001.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7001 405..2215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7001.1.1 ID=prot_C-tenellus_contig7001.1.1|Name=mRNA_C-tenellus_contig7001.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=174bp
MQIPPFNIQSDGQRRLAESEAQQKASERSYERSMAALRDDLHRKLEEEEA
RRVREVGEARRKSKAVAGALQLLQGELRESEAKGSELEGQVSALSARNRN
GSIIRGSGVGVTSGTGGSARRGSVDSARLGEATEAEIATLRRQLQAAMNA
KDLAEKVVKEAKSRAEEEGTRRR*
back to top