prot_C-tenellus_contig695.1.4 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig695.1.4
Unique Nameprot_C-tenellus_contig695.1.4
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length474
Homology
BLAST of mRNA_C-tenellus_contig695.1.4 vs. uniprot
Match: D7FH00_ECTSI (G_PROTEIN_RECEP_F3_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH00_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 3.770e-18
Identity = 65/203 (32.02%), Postives = 96/203 (47.29%), Query Frame = 0
Query:    3 LSVLTLIGVNTNVMCSLRVWVWSIGFDLAFGAVTLKLWRVWSIVEASMKFSKVALTARKMRCLLALLLFSDALILSLWTASKLSHVRTKMTTVTADVEIPLVECSTLSSGYFLAWGLLKIFVVVASCYVSFITRKLKSALAESGAVGLTVYNTGVVGILVSAVYWAGASAQICAVVTAVAVVLGGVGAMCTILAPKLWTAKQE 205
            LS+  L+G  T++ C+LR+W +S GFDLAFGA+TLK+    S  E+                                              V     I    C + + G   +W  LK+ +V+  CYV F  RK +  + ++G +G+  YN GV GILV+AV WA A+AQ+      VA++L GVG +  +L  ++  AKQE
Sbjct:  183 LSIFALLGATTDLTCALRLWGYSAGFDLAFGALTLKMRSACSAAES----------------------------------------------VGGGAFITRSSCVSCNHGLMWSWIALKVVLVLFCCYVRFQARKFQDYMRDNGGIGMATYNLGVAGILVAAVVWAEANAQVRRTTEGVAILLAGVGVLFPVLGTRVLRAKQE 339          
BLAST of mRNA_C-tenellus_contig695.1.4 vs. uniprot
Match: A0A3M7T3H7_BRAPC (Gamma-aminobutyric acid type B receptor subunit 2 n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7T3H7_BRAPC)

HSP 1 Score: 66.6 bits (161), Expect = 6.470e-8
Identity = 51/145 (35.17%), Postives = 81/145 (55.86%), Query Frame = 0
Query:   16 MCSLRVWVWSIGFDLAFGAVTLKLWRVWSIVEASMKFSKVALTARKMRCLLALLLFSDALILSLWTASKLSHVRTKMTTVTADVE-IPLVECSTLSSGYFLAW--GLL--KIFVVVASCYVSFITRKLK-SALAESGAVGLTVYN 154
            +C ++VW+ +IGF LAFGA+  K +RV +I+  S KFSK  +   K+  L+  LL  + L+L +W      H+  K + VT D E +  VE     S +   W  GL   K  +++  C+ ++ TR +  SAL +S  +G++VYN
Sbjct:  563 ICVIKVWLLTIGFTLAFGAMFSKTYRVHAILTNS-KFSKKVIKDYKLFGLVIFLLIIEVLLLLVWQIIDPLHLVNKPSDVTRDGEKMVFVETRVCESNHMKIWLAGLFSYKSLLILFGCFFAYETRHVTISALNDSKYIGISVYN 706          
BLAST of mRNA_C-tenellus_contig695.1.4 vs. uniprot
Match: A0A7S4KQN8_9EUKA (Hypothetical protein n=2 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KQN8_9EUKA)

HSP 1 Score: 63.5 bits (153), Expect = 6.190e-7
Identity = 50/163 (30.67%), Postives = 81/163 (49.69%), Query Frame = 0
Query:    8 LIGVNTNVMCSLRVWVWSIGFDLAFGAVTLKLWRVWSIVEASMKFSKVALTARKMRCLLALLLFSDALILSLWTASKLSHVRTKMTTVTADVEIPLVECSTLSSGYFLAWGLLKI---FVVVASCYVSFITRKLKSALAESGAVGLTVYNTGV---VGILVSA 164
            L G  T  +C  R W + +GF LAF A+  K WR+  I  ++M F    ++  ++  ++AL +    ++L+LW+        T      +D  I  ++C   S   ++  G L      +V+ SCYV+ ITRK++    ES  +GL +YN  V   VGI + A
Sbjct:  819 LTGEPTTNICRARAWFFCLGFSLAFAALFAKTWRIHKIYLSAMDFQNKPISPVQLMGIMALAMAPTIILLALWSGIHPLGPETIEDDTNSDKLI--LQCQ--SDNQWVWQGCLIAVNGILVLYSCYVTIITRKIRLMFNESRYIGLAIYNVAVFATVGIALGA 977          
BLAST of mRNA_C-tenellus_contig695.1.4 vs. uniprot
Match: A0A6P4XNG3_BRABE (gamma-aminobutyric acid type B receptor subunit 2-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4XNG3_BRABE)

HSP 1 Score: 61.6 bits (148), Expect = 2.380e-6
Identity = 58/205 (28.29%), Postives = 107/205 (52.20%), Query Frame = 0
Query:   14 NVMCSLRVWVWSIGFDLAFGAVTLKLWRVWSIVEASMKFSKVALTARKMRCLLALLLFSDALILSLWTASKLSHVRTKMTTVTAD-----VEIPLVECSTLSSGYFLAW--------GLLKIFVVVASCYVSFITRKLK-SALAESGAVGLTVYNTGVVGILVSAVYWAGASAQICA-VVTAVAVVLGGVGAMCTILAPKLWTAK 203
             V+C++R W+ ++GF LAFGA+  K WRV  ++  + K  K+A+   K+  ++A+LL  D +IL+ W    +  +   + T  A+       +P++E     S  F  W        GLL IF     C++++ TR +   AL +S  +G++VYN  ++ ++ + + +     Q  A V+T++ ++L     +C +  PKL T +
Sbjct:  524 EVLCTVRTWMLTVGFTLAFGAMFSKTWRV-HVIFTNTKMKKMAIKDVKLFGIVAVLLLMDIVILTTWQV--VDPLTRGLQTFPAEPGREVTVVPVLE--HCDSNNFTLWLAVIFVYKGLLLIF----GCFLAWETRHVNIPALNDSKYIGMSVYNVVIMCVIGAGISFVIKDRQNEAFVLTSLFIILCTTITLCLVFVPKLVTMR 719          
BLAST of mRNA_C-tenellus_contig695.1.4 vs. uniprot
Match: UPI00083BF360 (gamma-aminobutyric acid type B receptor subunit 2 isoform X1 n=3 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083BF360)

HSP 1 Score: 61.6 bits (148), Expect = 2.430e-6
Identity = 43/150 (28.67%), Postives = 85/150 (56.67%), Query Frame = 0
Query:   16 MCSLRVWVWSIGFDLAFGAVTLKLWRVWSIVEASMKFSKVALTARKMRCLLALLLFSDALILSLW--TASKLSHVRTKMTTVTAD-------VEIPLVECSTLSSGYFLAWGLLKIFVVVASCYVSFITRKLK-SALAESGAVGLTVYNT 155
            +C++RV++ S GF LAFG++  K +R+  I   S       L  +++  L+ +LL  DA+I++LW  T     H+      +++D        ++ + +C+  ++G+F+A  + K F++    Y ++ TR++K  AL +S  +G++VY+T
Sbjct:  606 LCTMRVYLLSAGFSLAFGSIFAKTYRIQRIFTYSTSVRDKFLKDKQLISLIFVLLIIDAVIIALWVYTDPMQRHLHNLTMQISSDDRSVLYQPQVEVCKCNN-TTGWFIAICVYKGFLLTMGVYTAWETRRIKVDALNDSQYIGISVYST 754          
BLAST of mRNA_C-tenellus_contig695.1.4 vs. uniprot
Match: A0A6H5K1C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1C2_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 3.840e-6
Identity = 36/88 (40.91%), Postives = 45/88 (51.14%), Query Frame = 0
Query:  378 SVESNDGGVVTEWEVSSLPLVMRAETGTTLFCPHCDRQVAGCGFSGCSGSLVPPPSNGPECDCGDDLSIRISERQRRWRRWTFSRPAP 465
            S+  + GG      V SL  VM AE GT L CPHC ++VAGCGF GCSGSL+  PS   E    +  ++   +  R      FS   P
Sbjct:  551 SMAGSTGGETRSSGVKSL--VMFAEYGTRLHCPHCSKEVAGCGFRGCSGSLIRKPSFSDEFGPEESFTLPAPQPMRAPALGGFSSALP 636          
BLAST of mRNA_C-tenellus_contig695.1.4 vs. uniprot
Match: A0A6S7HGT8_PARCT (Gamma-aminobutyric acid type B receptor subunit 2-like isoform X1 (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HGT8_PARCT)

HSP 1 Score: 59.7 bits (143), Expect = 5.690e-6
Identity = 48/158 (30.38%), Postives = 83/158 (52.53%), Query Frame = 0
Query:   17 CSLRVWVWSIGFDLAFGAVTLKLWRVWSIVEASMKFSKVALTARKMRCLLALLLFSDALILSLWTA-----SKLSHVRTKMTTVTADVEIPLV-ECSTLSSGYFLAWGL-LKIFVVVASCYVSFITRKLK-SALAESGAVGLTVYNT---GVVGILVS 163
            C+ RVW+ S+GF  AFGA+  K WRV  I  AS  F +  +    +  LL  LL  D ++L++W       S +  + T+      ++  P +  C++    YFL   L  K  ++V   ++++ TR ++  AL +S  +G++VYN     VVG++++
Sbjct:   93 CNARVWLMSLGFTTAFGAMFSKTWRVHRIFTASKNFRRAVIKNFHLYGLLFALLAVDFILLTVWMIASPYRSGILQLPTEENKEEDEIIYPYIFNCTSQHENYFLITTLGCKGLLLVFGIFLAWETRNIEIKALNDSKYIGISVYNVVILSVVGVILA 250          
BLAST of mRNA_C-tenellus_contig695.1.4 vs. uniprot
Match: B3S763_TRIAD (G_PROTEIN_RECEP_F3_4 domain-containing protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3S763_TRIAD)

HSP 1 Score: 58.5 bits (140), Expect = 8.950e-6
Identity = 45/150 (30.00%), Postives = 84/150 (56.00%), Query Frame = 0
Query:   16 MCSLRVWVWSIGFDLAFGAVTLKLWRVWSIVEASMKFSKVALTARKMRCLLALLLFSDALILSLWTASKL-----SHVRTKMTTVTADVEIPLVE----CSTLSSGYFLAWGL-LKIFVVVASCYVSFITRKLK-SALAESGAVGLTVYN 154
            MC++++W+ S+GF +AFG+VT+K WR++ I     K   V    +    L+ LL   D +ILSLWT         +++ +    VTA++E  ++     C +  +  +LA  L  K+ +++   ++++ TRK+   +L +S ++ +TVYN
Sbjct:   39 MCTIQIWLLSLGFTIAFGSVTVKSWRIYKIFFNPTKIRMVIRDIQLFGRLIQLLAV-DIVILSLWTTIDPITIMENNIGSPKRIVTANIETIVMHRIQICYSKYTSVWLAVTLSYKLLLLLVGVFLAWKTRKVSIDSLNDSHSLAMTVYN 187          
BLAST of mRNA_C-tenellus_contig695.1.4 vs. uniprot
Match: A0A813MF38_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813MF38_9BILA)

HSP 1 Score: 59.7 bits (143), Expect = 9.680e-6
Identity = 48/145 (33.10%), Postives = 79/145 (54.48%), Query Frame = 0
Query:   16 MCSLRVWVWSIGFDLAFGAVTLKLWRVWSIVEASMKFSKVALTARKMRCLLALLLFSDALILSLWTASKLSHVRTKMTTVTADVE-IPLVECSTLSSGYFLAW--GLL--KIFVVVASCYVSFITRKLK-SALAESGAVGLTVYN 154
            +C +R+W+ +IGF LAFGA+  K +RV +I+  S KF+K  +   K+  L+  LL  + L+L+ W       +  K   +  D E +  VE     S Y   W  GL   K F+++  C+ ++ TR +  +AL +S  +G++VYN
Sbjct:  576 ICVIRLWLLTIGFSLAFGAMFSKTYRVHAILTNS-KFTKKVIKDYKLFGLVVFLLVIEMLMLTSWQLLDPLQLIKKPYDIKRDGEKMFFVENFVCESNYMKIWLAGLFSYKSFLIIFGCFFAYETRHVTIAALNDSKYIGISVYN 719          
BLAST of mRNA_C-tenellus_contig695.1.4 vs. uniprot
Match: UPI000A2A6097 (gamma-aminobutyric acid type B receptor subunit 1 isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6097)

HSP 1 Score: 59.3 bits (142), Expect = 1.180e-5
Identity = 47/152 (30.92%), Postives = 75/152 (49.34%), Query Frame = 0
Query:   14 NVMCSLRVWVWSIGFDLAFGAVTLKLWRVWSIVEASMKFSK-VALTARKMRCLLALLLFSDALILSLWTA-SKLSHVRTKMTTVTADVEIPLVECSTLSSGYFLAW--------GLLKIFVVVASCYVSFITRKLK-SALAESGAVGLTVYN 154
            ++ C + +W+ ++GF LAFGA+  K WRV  I   S K +K V +  R++ CLL  LL  D +IL  W     L   + +M+      E  L      +  + + W        GLL +F      Y+++ TRK+   AL +S  +G+ +YN
Sbjct:  515 SIFCEIELWIITLGFTLAFGAMFSKTWRVHQIFLGSKKSNKRVIIPDRQLFCLLGFLLLIDLIILLTWQIMDPLIETKQEMSMEVFGDEAVLPYVRKCNCQHMVIWKSILLVYKGLLLLF----GAYLAWETRKVHIEALNDSKLIGMCIYN 662          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig695.1.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FH00_ECTSI3.770e-1832.02G_PROTEIN_RECEP_F3_4 domain-containing protein n=1... [more]
A0A3M7T3H7_BRAPC6.470e-835.17Gamma-aminobutyric acid type B receptor subunit 2 ... [more]
A0A7S4KQN8_9EUKA6.190e-730.67Hypothetical protein n=2 Tax=Paramoeba aestuarina ... [more]
A0A6P4XNG3_BRABE2.380e-628.29gamma-aminobutyric acid type B receptor subunit 2-... [more]
UPI00083BF3602.430e-628.67gamma-aminobutyric acid type B receptor subunit 2 ... [more]
A0A6H5K1C2_9PHAE3.840e-640.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6S7HGT8_PARCT5.690e-630.38Gamma-aminobutyric acid type B receptor subunit 2-... [more]
B3S763_TRIAD8.950e-630.00G_PROTEIN_RECEP_F3_4 domain-containing protein n=2... [more]
A0A813MF38_9BILA9.680e-633.10Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
UPI000A2A60971.180e-530.92gamma-aminobutyric acid type B receptor subunit 1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01176GABABRECEPTRcoord: 176..198
score: 17.39
coord: 17..36
score: 35.91
coord: 143..166
score: 30.68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 335..385
NoneNo IPR availablePANTHERPTHR10519:SF20METABOTROPIC GABA-B RECEPTOR SUBTYPE 2, ISOFORM Ccoord: 7..240
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 169..173
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 14..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 174..197
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..168
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..135
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 198..473
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..146
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 83..113
IPR017978GPCR family 3, C-terminalPFAMPF000037tm_3coord: 3..200
e-value: 1.9E-22
score: 80.3
IPR017978GPCR family 3, C-terminalPROSITEPS50259G_PROTEIN_RECEP_F3_4coord: 1..200
score: 15.133
IPR002455GPCR family 3, GABA-B receptorPANTHERPTHR10519GABA-B RECEPTORcoord: 7..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig695contigC-tenellus_contig695:5650..10528 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig695.1.4mRNA_C-tenellus_contig695.1.4Choristocarpus tenellus KU2346mRNAC-tenellus_contig695 1414..11540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig695.1.4 ID=prot_C-tenellus_contig695.1.4|Name=mRNA_C-tenellus_contig695.1.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=474bp
MSLSVLTLIGVNTNVMCSLRVWVWSIGFDLAFGAVTLKLWRVWSIVEASM
KFSKVALTARKMRCLLALLLFSDALILSLWTASKLSHVRTKMTTVTADVE
IPLVECSTLSSGYFLAWGLLKIFVVVASCYVSFITRKLKSALAESGAVGL
TVYNTGVVGILVSAVYWAGASAQICAVVTAVAVVLGGVGAMCTILAPKLW
TAKQESRFIGATPSDPDIALANALTAIATLTAASPGMNNNSNGGGTREEA
TAAAAKYALTSPPCRKTLGALTPLVLALDGDRWASVGPMSRSSRSRSSAT
RILSRSSSGVVDKSLKWDKPWGGHRKTWGGRARNMLLRDDREGSEAEAGA
GNRTRCRSSIAGGGEGGGDEAGGLGSGSVESNDGGVVTEWEVSSLPLVMR
AETGTTLFCPHCDRQVAGCGFSGCSGSLVPPPSNGPECDCGDDLSIRISE
RQRRWRRWTFSRPAPSNTFDDEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017978GPCR_3_C
IPR002455GPCR3_GABA-B