prot_C-tenellus_contig6917.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6917.3.1
Unique Nameprot_C-tenellus_contig6917.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length72
Homology
BLAST of mRNA_C-tenellus_contig6917.3.1 vs. uniprot
Match: A0A6H5JHN3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHN3_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.760e-15
Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 0
Query:   15 VFRLLGSIRALGSPADLVSNVGTGAKALLYDPVEGLIFDGPADFFQDVGKGANTFVRG 72
            V  L+GS+RALGSPADL+SNVG GAKAL+Y P +GL+  GP +FF+ VG+GA +FV+G
Sbjct: 2904 VLSLVGSMRALGSPADLISNVGGGAKALVYAPAQGLV-QGPGEFFEGVGRGAQSFVKG 2960          
BLAST of mRNA_C-tenellus_contig6917.3.1 vs. uniprot
Match: A0A6H5L0S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S6_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 3.290e-15
Identity = 35/59 (59.32%), Postives = 50/59 (84.75%), Query Frame = 0
Query:   14 KVFRLLGSIRALGSPADLVSNVGTGAKALLYDPVEGLIFDGPADFFQDVGKGANTFVRG 72
            +V   +G++RALGSPADL+SN+G GAKAL+Y P +GL+  GPA+FF+ VG+GA++FV+G
Sbjct: 2604 QVLSFVGAMRALGSPADLISNIGGGAKALVYAPAQGLV-QGPAEFFEGVGRGAHSFVKG 2661          
BLAST of mRNA_C-tenellus_contig6917.3.1 vs. uniprot
Match: D8LPW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPW3_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 1.630e-9
Identity = 28/47 (59.57%), Postives = 39/47 (82.98%), Query Frame = 0
Query:   14 KVFRLLGSIRALGSPADLVSNVGTGAKALLYDPVEGLIFDGPADFFQ 60
            +V   +G++RALGSPADL+SN+G GAKAL+Y P +GL+  GPA+FF+
Sbjct: 3218 QVLSFVGAMRALGSPADLISNIGGGAKALVYAPAQGLV-QGPAEFFE 3263          
BLAST of mRNA_C-tenellus_contig6917.3.1 vs. uniprot
Match: A0A836C8S3_9STRA (Peroxin/Ferlin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8S3_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.060e-8
Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 0
Query:   14 KVFRLLGSIRALGSPADLVSNVGTGAKALLYDPVEGLIFDGPADFFQDV 62
            +V +L+GSIRALGSPAD VS VG+GAKALLY P+   I + P +FF+ V
Sbjct: 3641 QVLKLVGSIRALGSPADFVSGVGSGAKALLYAPISASILE-PGEFFRYV 3688          
BLAST of mRNA_C-tenellus_contig6917.3.1 vs. uniprot
Match: A0A7S2W8U1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8U1_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.430e-8
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0
Query:   14 KVFRLLGSIRALGSPADLVSNVGTGAKALLYDPVEGLIFDGPADFFQDVGKGANTFVRG 72
            ++++L GSI A+G+P DLVSNVG G KA +Y+P +GL+  GP +F +   +G  + V G
Sbjct:  299 QLYKLAGSIAAIGNPVDLVSNVGGGVKAFIYEPAQGLVL-GPEEFVKGGLRGTGSLVSG 356          
BLAST of mRNA_C-tenellus_contig6917.3.1 vs. uniprot
Match: A0A7S3Y5K3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5K3_HETAK)

HSP 1 Score: 57.4 bits (137), Expect = 6.850e-8
Identity = 27/58 (46.55%), Postives = 40/58 (68.97%), Query Frame = 0
Query:   14 KVFRLLGSIRALGSPADLVSNVGTGAKALLYDPVEGLIFDGPADFFQDVGKGANTFVR 71
            +V ++ GSI  LGSPADL+SN+GTG     Y+P +GL+  GP+ F + V +GA + V+
Sbjct:  652 QVLKIAGSISMLGSPADLLSNIGTGVGDFFYEPYDGLML-GPSAFAKGVKRGATSLVK 708          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6917.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JHN3_9PHAE1.760e-1563.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L0S6_9PHAE3.290e-1559.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPW3_ECTSI1.630e-959.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8S3_9STRA1.060e-861.22Peroxin/Ferlin domain-containing protein n=1 Tax=T... [more]
A0A7S2W8U1_9STRA1.430e-845.76Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3Y5K3_HETAK6.850e-846.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031645Vacuolar protein sorting-associated protein 13, C-terminalPFAMPF16909VPS13_Ccoord: 12..71
e-value: 6.8E-13
score: 48.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6917contigC-tenellus_contig6917:6568..6783 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6917.3.1mRNA_C-tenellus_contig6917.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6917 6568..6783 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6917.3.1 ID=prot_C-tenellus_contig6917.3.1|Name=mRNA_C-tenellus_contig6917.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=72bp
MSVCLSVCLSVCEKVFRLLGSIRALGSPADLVSNVGTGAKALLYDPVEGL
IFDGPADFFQDVGKGANTFVRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031645VPS13_C