prot_C-tenellus_contig6913.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6913.1.1
Unique Nameprot_C-tenellus_contig6913.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length306
Homology
BLAST of mRNA_C-tenellus_contig6913.1.1 vs. uniprot
Match: D8LNH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNH3_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 5.350e-27
Identity = 107/332 (32.23%), Postives = 161/332 (48.49%), Query Frame = 0
Query:    1 VASTQVKKALNLIWLMFDGCLQDPLSLMEVCAAVQNGIQVIPIRVLGQGVLPISLSIW-----------GGVGDPLLTAHGGEEDSSSRSKNSKTRRIGDDPYRDLDEEKQENGPVSARLATKPLDDNTRGREEKNGNKREKHNQLGVDHFFEGLSQSLPKCVRDELHSNRFLIRDVVAAIRIVL-------TGDTGSSPLLRKGRKSAVARAGVGAVTEVMLFPMPSLFDVKSDHSLEE--ALERLLGAGKWGRRRNGKEGVK----RENGPGNPVWKWNWERLPHKGGSTNRNDGSLQQLT--VPLRNEEELLQLIQEENAKTEDLAGKL 306
            V  T+V ++LN++WL+  G L+DP  LMEVCAAV+ G  V+P+R+ G G+ P+++ IW           G      LTA   ++ +     N+K      +   DL            +LA   +D      E +   +R +  +  VD F+  L+Q LPK V+ ELH NRFL++DV+AA+R          TGDTG +     G +S  A +   +         P +FD+ SD   E    L  L+G     RR  GK  V+    R+ G  +    WNWE++P       R      +LT  VP R++EE+ ++I+ E A+ +DLAG L
Sbjct:  119 VTFTKVAQSLNMVWLISAGSLEDPFCLMEVCAAVRQGTPVLPVRLAGAGMRPLNIPIWTYSIQVKPSRSGATTSSTLTASSTDDTAVVGDANTKNGPGKLEKSSDLKGGXXXXXXXEHQLAATGVDAGNTATEFRERGRRLR--RRAVDGFYAQLAQRLPKQVQAELHRNRFLVKDVIAAVRSCFEGTGESETGDTGQAGAGATGTRSDKAASATVSKARAK----PPVFDI-SDQPAEHDMLLTALVGVN---RRNTGKANVEDVANRDKGRESGSSSWNWEQVPRSAPLAGRA-----RLTDAVPWRSDEEVSEMIKMEEAEADDLAGLL 435          
BLAST of mRNA_C-tenellus_contig6913.1.1 vs. uniprot
Match: A0A6H5L1M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1M4_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.710e-24
Identity = 106/325 (32.62%), Postives = 161/325 (49.54%), Query Frame = 0
Query:    5 QVKKALNLIWLMFDGCLQDPLSLMEVCAAVQNGIQVIPIRVLGQGVLPISLSIW-----------GGVGDPLLTAHGGEEDSSSRSKNSKTRRIGDDPYRDLDEEKQENGPVSARLATKPLDDNTRGREEKNGNKREKHNQLGVDHFFEGLSQSLPKCVRDELHSNRFLIRDVVAAIRIVLTGDTGSSPL---LRKGRKSAVARAG-VGAVTEVMLFPMPSLFDVKSDHSLEE--ALERLLGAGKWGRRRNGKEGVK----RENGPGNPVWKWNWERLPHKGGSTNRNDGSLQQLT--VPLRNEEELLQLIQEENAKTEDLAGKL 306
            +V ++LN++WL+  G L+DP  LMEVCAAV+ G  V+P+R+ G G+ P++L IW           G      LTA   ++ +     N+K      +   DL + ++ +G    +LA           E +   +R +  +  VD F+  L+Q LP  V+ ELH NRFL++DV+AA+R    G TG S +    + G   A  R+    + T       P +FD+ SD   E    L  L+G     RR  GK  V+    R+ G  +    WNWE++P       R      +LT  VP R++EE+ Q+I+ E A+ +DLAG L
Sbjct:  147 EVAQSLNMVWLISAGSLEDPFCLMEVCAAVRQGTPVLPVRLAGAGMRPLNLPIWAYSIEIKPSRSGATTSSSLTASSADDAAVIADANTKNGPGNLENGSDLKDCERGSGGGEHQLAATGCGTGNTATEFRERGRRLR--RRAVDGFYAQLAQRLPTKVQAELHRNRFLVKDVIAAVRSCFEG-TGESEIGGTQQAGAGPADTRSDKTASATVSKARAKPPVFDI-SDQPPEHDMLLAALVGVN---RRNTGKADVEDDANRDKGRESGSSFWNWEQVPRSAPLAGRA-----RLTDAVPWRSDEEVSQMIKMEEAEADDLAGLL 459          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6913.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNH3_ECTSI5.350e-2732.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1M4_9PHAE1.710e-2432.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 282..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6913contigC-tenellus_contig6913:359..1318 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6913.1.1mRNA_C-tenellus_contig6913.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6913 359..1318 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6913.1.1 ID=prot_C-tenellus_contig6913.1.1|Name=mRNA_C-tenellus_contig6913.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=306bp
VASTQVKKALNLIWLMFDGCLQDPLSLMEVCAAVQNGIQVIPIRVLGQGV
LPISLSIWGGVGDPLLTAHGGEEDSSSRSKNSKTRRIGDDPYRDLDEEKQ
ENGPVSARLATKPLDDNTRGREEKNGNKREKHNQLGVDHFFEGLSQSLPK
CVRDELHSNRFLIRDVVAAIRIVLTGDTGSSPLLRKGRKSAVARAGVGAV
TEVMLFPMPSLFDVKSDHSLEEALERLLGAGKWGRRRNGKEGVKRENGPG
NPVWKWNWERLPHKGGSTNRNDGSLQQLTVPLRNEEELLQLIQEENAKTE
DLAGKL
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