prot_C-tenellus_contig6880.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6880.2.1
Unique Nameprot_C-tenellus_contig6880.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length239
Homology
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BLAST of mRNA_C-tenellus_contig6880.2.1 vs. uniprot
Match: A0A6H5KY61_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY61_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 2.720e-20
Identity = 45/77 (58.44%), Postives = 55/77 (71.43%), Query Frame = 0 
Query:  144 LSQLSEKNVQTDKVCERNWRRGTCSHDLLCVAKDTIQHLQWKGGELAFGTDKGGIFIVSFDTGSVIESFKGHDGEVT 220
            +S L ++ V+ D+VC  NWR+GTCSHDLL  A D IQHL+W G  LAFGTD GG +I+S  TG VI  F+GH G VT
Sbjct:  157 ISALRKREVEIDRVCAYNWRKGTCSHDLLFQAADPIQHLRWVGDHLAFGTDGGGTWIISRQTGFVINVFEGHSGAVT 233
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6880.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KY61_9PHAE2.720e-2058.44Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..105
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..238
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 161..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6880contigC-tenellus_contig6880:2242..3416 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6880.2.1mRNA_C-tenellus_contig6880.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6880 2226..3851 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6880.2.1 ID=prot_C-tenellus_contig6880.2.1|Name=mRNA_C-tenellus_contig6880.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=239bp
MKKLVAVVQMTVVFLNWRGEAFVSPCFGFGAQFYTCWGAQCHTPSQLRWI
DAGYGSRSSAGDSTRLSQLLPLRKRSGEVDGEHDDDHNAETDGDGQEEGR
EGVVGNAFGAGGVGKGMGSEAEDVLKMKVAGEIPLGDERIKNLLSQLSEK
NVQTDKVCERNWRRGTCSHDLLCVAKDTIQHLQWKGGELAFGTDKGGIFI
VSFDTGSVIESFKGHDGEVTGKRRIHRHTQTSQFFLNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf