prot_C-tenellus_contig6880.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6880.1.2
Unique Nameprot_C-tenellus_contig6880.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length324
Homology
BLAST of mRNA_C-tenellus_contig6880.1.2 vs. uniprot
Match: A0A7S1I7T7_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I7T7_9EUGL)

HSP 1 Score: 84.3 bits (207), Expect = 1.060e-15
Identity = 52/157 (33.12%), Postives = 79/157 (50.32%), Query Frame = 0
Query:   74 LHRDDQTKSKAVPVGGQ-----IAFILVVDLHGTEDLVEFPCLALDVTSGRQVGRFHRWIKPSRLYKPVPEGI-NASSTAIPFSEVLSSLHQWMAELGVSTGETDKVHGVTRESNFR--WVIYRDEDLMQRLPRQICLLEGLPLPTHFHQWTNALSV 222
            L R   TK   VP  G       +   ++DL G ++++E P LAL  +    +GRFHRW++P +++  +  G  N  S A+PFS+ LS L +W             V G+ R S  R  +V   + DL  ++P+Q C + G+P P  F+QW N   V
Sbjct:    2 LERSWLTKQDPVPGSGSSTDQPFSVYFILDLEGQDEIIELPVLALRSSDLTVLGRFHRWVRPVQMFDGLKHGHPNHGSNAVPFSQALSELLEW-------------VEGIERSSGGRTAFVTCGNWDLKTQVPQQ-CAISGVPCPDRFNQWVNIKDV 144          
BLAST of mRNA_C-tenellus_contig6880.1.2 vs. uniprot
Match: A0A7S1TCW1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCW1_9RHOD)

HSP 1 Score: 75.1 bits (183), Expect = 1.320e-11
Identity = 41/126 (32.54%), Postives = 64/126 (50.79%), Query Frame = 0
Query:   93 FILVVDLHGTEDLVEFPCLALDVTSGRQVGRFHRWIKPSRLYKPVPEGINASSTAIPFSEVLSSLHQWMAELGVSTGETDKVHGVTRESNFRWVIYRDEDLMQRLPRQICLLEGLPLPTHFHQWTN 218
            +  V+DL G ++++EFP L   V + R+VGRFHRWI+P  L+K     +N  S AIPF   +     WM         T  V   +++    +V   D DL  ++P+Q  +  G  +P +  +W N
Sbjct:   28 YFAVLDLEGRDEIIEFPVLIFHVPTMREVGRFHRWIRPVELFKN--RELNPESEAIPFLRAMEEFQDWMLH-------TMHVDVSSKDKPVAFVTCGDWDLRVQIPKQCSISRGR-VPKYLRRWIN 143          
BLAST of mRNA_C-tenellus_contig6880.1.2 vs. uniprot
Match: A0A7S4VM40_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VM40_9DINO)

HSP 1 Score: 72.8 bits (177), Expect = 1.150e-10
Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 0
Query:   84 AVPVGGQ-IAFILVVDLHGTEDLVEFPCLALDVTSGRQVGRFHRWIKPSRLYKPVPEGINASSTAIPFSEVLSSLHQWMAE-LGVSTGETDKVHGVTRESNFRWVIYRDEDLMQRLPRQICLLEGLPLPTHFHQWTN 218
            A+  GGQ +  +L+ DL G  +++EFP +A+D+ S R+VGRF R+++P RL+      +   S A PF EVL    QWM + LG      D + G    + F  +   D D  + +  Q C + G+P+P+ F QW N
Sbjct:  209 ALAEGGQRLRHLLIFDLEGKYEIIEFPVIAIDLRSQREVGRFQRFVRPLRLFDGYV--LTPDSPAAPFPEVLEEFEQWMRKTLGHGL---DDMAGARATTAF--LTCGDWDC-KHVHTQ-CGICGIPVPSAFRQWVN 336          
BLAST of mRNA_C-tenellus_contig6880.1.2 vs. uniprot
Match: A0A812JPE7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JPE7_9DINO)

HSP 1 Score: 73.2 bits (178), Expect = 1.660e-10
Identity = 48/154 (31.17%), Postives = 79/154 (51.30%), Query Frame = 0
Query:   69 RQEESLHRDDQTK----SKAVPVGGQIAFILVVDLHGTEDLVEFPCLALDVTSGRQVGRFHRWIKPSRLYKPVPEGINASSTAIPFSEVLSSLHQWMAELGVSTGETDKVHGVTRESNFRWVIYRDEDLMQRLPRQICLLEGLPLPTHFHQWTN 218
            R++ SLH    T     S A P G  I + LV DL G  +++EFP + +D  +G ++GRF R+++P++L++  P      + AIPF +VL+  + W++E     G   ++  +    +  +V   D D      R  C + G+P P  F QW N
Sbjct:  952 RKKVSLHEAASTPPLSASGAPPQG--IRYFLVFDLEGKHEIIEFPVMLIDAVAGTEIGRFQRFVRPTKLFEGCPV---TDTPAIPFPDVLAEFNTWLSE---KIGR--RLQDLAGTEDVAFVTCGDWDCKHI--RTQCGICGVPFPRAFSQWIN 1093          
BLAST of mRNA_C-tenellus_contig6880.1.2 vs. uniprot
Match: A0A812PKV5_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812PKV5_9DINO)

HSP 1 Score: 70.9 bits (172), Expect = 5.780e-10
Identity = 43/137 (31.39%), Postives = 71/137 (51.82%), Query Frame = 0
Query:   82 SKAVPVGGQIAFILVVDLHGTEDLVEFPCLALDVTSGRQVGRFHRWIKPSRLYKPVPEGINASSTAIPFSEVLSSLHQWMAELGVSTGETDKVHGVTRESNFRWVIYRDEDLMQRLPRQICLLEGLPLPTHFHQWTN 218
            S A P    I + LV DL G  +++EFP L +D  +G ++GRF R+++P++L++  P      + AIPF +VL+  + W++E     G   +        +  +V   D D  + +  Q C + G+P P  F QW N
Sbjct:  258 SGASPSPQGIRYFLVFDLEGKHEIIEFPVLLIDAVAGSEIGRFQRFVRPTKLFEGCPV---TDTPAIPFPDVLAEFNTWLSE---KIGRRLQDLAGRGMEDVAFVTCGDWDC-KHIKTQ-CGICGVPFPRAFAQWIN 386          
BLAST of mRNA_C-tenellus_contig6880.1.2 vs. uniprot
Match: A0A7S2QMP2_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QMP2_9DINO)

HSP 1 Score: 67.4 bits (163), Expect = 1.410e-9
Identity = 57/212 (26.89%), Postives = 98/212 (46.23%), Query Frame = 0
Query:   90 QIAFILVVDLHGTEDLVEFPCLALDVTSGRQVGRFHRWIKPSRLYKPVPEGINASSTAIPFSEVLSSLHQWMAE-LGVSTGETDKVHGVTRESNFRWVIYRDEDLMQRLPRQICLLEGLPLPTHFHQWTNALSVCSREEERRARESRVPLENEQSNTKITSKRIKKIKGHKRIQALLGMVGLEVDPNTPNAGMGTAIVSCMARCVRYLLKQG 300
            ++  +LV+DL G ++++EFP LA+DV   +++GRF  +++P RL+  +   +   S A+PFSEVL    +W+A  LG S  E      +        +   D D  + +  Q  + E +P+P  F +W N          +R+       E                +G K + A +GM+  +  P      +G   V  ++RCV +LL +G
Sbjct:   24 KLRHLLVLDLEGKDEIIEFPVLAIDVAKRQELGRFQLFVRPHRLFSGL--ALTTDSPAVPFSEVLRQFDEWLATTLGHSLFELAPTTAI--------LTCGDWDC-KHIHTQCGICE-IPVPDLFRRWVNI---------KRSYADAYGGE---------------FRGMKSMLARIGMLDRQGLPKFGFHHLGMHDVENISRCVLHLLSEG 199          
BLAST of mRNA_C-tenellus_contig6880.1.2 vs. uniprot
Match: A0A7S0ED65_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0ED65_9CRYP)

HSP 1 Score: 67.0 bits (162), Expect = 1.980e-9
Identity = 38/137 (27.74%), Postives = 68/137 (49.64%), Query Frame = 0
Query:   86 PVGGQIAFILVVDLHGTE--DLVEFPCLALDVTSGRQVGRFHRWIKPSRLYKPVPEGIN--ASSTAIPFSEVLSSLHQWMAELGVSTGETDKVHGVTRESNFRWVIYRDEDLMQRLPRQICLLEGLPLPTHFHQWTN 218
            PV  +I F  V+D+ G    +++E PC+ LD+  GR++ RFHRW+ P +  +   +  +  A + A+PF + L  L+ ++ E G S           R++   +V   D D+  ++ +  C    L +P    +W N
Sbjct:   67 PVEQEIQFAAVMDVEGASRGEIIEMPCILLDLKQGREIARFHRWVVPEKFLQRFLKNEHKLARTNAVPFPDALIQLNDFLIENGASF----------RQNKGVFVFCGDHDI--KMFKSSCFQHELIIPPFLRKWVN 191          
BLAST of mRNA_C-tenellus_contig6880.1.2 vs. uniprot
Match: A0A5D2W3V2_GOSMU (Exonuclease domain-containing protein n=3 Tax=Gossypium TaxID=3633 RepID=A0A5D2W3V2_GOSMU)

HSP 1 Score: 67.4 bits (163), Expect = 2.870e-9
Identity = 42/144 (29.17%), Postives = 75/144 (52.08%), Query Frame = 0
Query:   91 IAFILVVDLHGTEDLVEFPCLALDVTSGRQVGRFHRWIKPSRLYKPVPE----------GINA--SSTAIPFSEVLSSLHQWMAELGVSTGETDKVHGVTRESNFRWVIYRDEDLMQRLPRQICLLEGLPLPTHFHQWTNALSV 222
            + F+LV+DL G  +++EFP L +D  S   V  FHR+++P+++ +              G++     TA PF EV+     W+++  +   E +K   +TR +   +V   + DL  ++P+Q C + G+ LP +F +W N   V
Sbjct:   43 VDFLLVIDLEGKVEILEFPVLLIDAKSLSLVDFFHRFVRPTKMSEQAVNKYIEGKYGEIGVDRVWHDTAQPFKEVMQQFEAWLSQHNL--WEKEKGSRLTRAA---FVTCGNWDLKTKIPQQ-CEVSGIKLPPYFMEWINLKDV 180          
BLAST of mRNA_C-tenellus_contig6880.1.2 vs. uniprot
Match: A0A6D2HKD1_9BRAS (Exonuclease domain-containing protein n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2HKD1_9BRAS)

HSP 1 Score: 67.4 bits (163), Expect = 5.230e-9
Identity = 42/145 (28.97%), Postives = 73/145 (50.34%), Query Frame = 0
Query:   93 FILVVDLHGTEDLVEFPCLALDVTSGRQVGRFHRWIKPSRLYKPVPEGINA---------------SSTAIPFSEVLSSLHQWMAELGVSTGETDKVHGVTRESNFRWVIYRDEDLMQRLPRQICLLEGLPLPTHFHQWTNALSV 222
            F+LV+DL G  +++EFP L LD  +   V  FHR+++P+++ +   E IN                  TAIPF +V+     W+AE  + + + +   G   ++ F  V   + D+  ++P Q C++  + LP +F +W N   V
Sbjct:  122 FLLVLDLEGKVEILEFPVLILDAKTMEVVDLFHRFVRPTKMSE---EAINKYIEGKYGELGVDRVWHDTAIPFKQVVEEFEAWLAEHSLWSKQAN---GALNDAAF--VTCGNWDIKTKIPEQ-CVVSSINLPQYFMEWINLKDV 257          
BLAST of mRNA_C-tenellus_contig6880.1.2 vs. uniprot
Match: A0A7J7MM12_9MAGN (Exonuclease domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MM12_9MAGN)

HSP 1 Score: 65.5 bits (158), Expect = 2.200e-8
Identity = 47/152 (30.92%), Postives = 75/152 (49.34%), Query Frame = 0
Query:   93 FILVVDLHGTEDLVEFPCLALDVTSGRQVGRFHRWIKPSRLYKP-VPEGINAS-----------STAIPFSEVLSSLHQWMAELGVSTGETDKVH-GVTRESNFRWVIYRDEDLMQRLPRQICLLEGLPLPTHFHQWTNALSVCSREEERRA 231
            ++LVVDL G  +++EFP + +D  +   V  FHR+++PS++ +  + E I               TAIPF EVL     WM+   +     D++H G    S F  V   + DL  ++P+Q C    + LP +F +W N   +     +RRA
Sbjct:  113 YLLVVDLEGKVEILEFPVVLIDARTLEFVDYFHRFVRPSKMSEQRIGEYIEGKYGKLGVDGVWHDTAIPFDEVLGQFEVWMSNHRL----WDRMHEGALHRSAF--VTCGNWDLKTKVPQQ-CKTSSMKLPPYFMEWINLKDIYLNFYKRRA 257          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6880.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1I7T7_9EUGL1.060e-1533.12Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7S1TCW1_9RHOD1.320e-1132.54Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S4VM40_9DINO1.150e-1035.77Hypothetical protein n=2 Tax=Alexandrium monilatum... [more]
A0A812JPE7_9DINO1.660e-1031.17Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A812PKV5_9DINO5.780e-1031.39Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A7S2QMP2_9DINO1.410e-926.89Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A7S0ED65_9CRYP1.980e-927.74Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A5D2W3V2_GOSMU2.870e-929.17Exonuclease domain-containing protein n=3 Tax=Goss... [more]
A0A6D2HKD1_9BRAS5.230e-928.97Exonuclease domain-containing protein n=5 Tax=Colu... [more]
A0A7J7MM12_9MAGN2.200e-830.92Exonuclease domain-containing protein n=1 Tax=King... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 86..301
e-value: 7.0E-13
score: 50.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..81
NoneNo IPR availablePANTHERPTHR230443'-5' EXONUCLEASE ERI1-RELATEDcoord: 67..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6880contigC-tenellus_contig6880:3..1781 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6880.1.2mRNA_C-tenellus_contig6880.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig6880 2..1781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6880.1.2 ID=prot_C-tenellus_contig6880.1.2|Name=mRNA_C-tenellus_contig6880.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=324bp
TRREVYQAGLVCASFAAGYCASNLISCKEGTHDVDRVATAVRAWLDAPLG
GGDEEGMNGSDDPQQSNLRQEESLHRDDQTKSKAVPVGGQIAFILVVDLH
GTEDLVEFPCLALDVTSGRQVGRFHRWIKPSRLYKPVPEGINASSTAIPF
SEVLSSLHQWMAELGVSTGETDKVHGVTRESNFRWVIYRDEDLMQRLPRQ
ICLLEGLPLPTHFHQWTNALSVCSREEERRARESRVPLENEQSNTKITSK
RIKKIKGHKRIQALLGMVGLEVDPNTPNAGMGTAIVSCMARCVRYLLKQG
GLERLPVTGYVSSRWQKMHVPSGH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf