prot_C-tenellus_contig6879.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6879.1.1
Unique Nameprot_C-tenellus_contig6879.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length223
Homology
BLAST of mRNA_C-tenellus_contig6879.1.1 vs. uniprot
Match: D7G2T1_ECTSI (Putative transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T1_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 7.120e-50
Identity = 107/229 (46.72%), Postives = 136/229 (59.39%), Query Frame = 0
Query:    1 GDDDYSVNATGEGFLLAAALSTVMMGVITNLPIIVAPSVLYTRRSSFSVGDILAAQFVSNFCAAVVMGSALRLSLVSYIPTALRVGAGCGISILVSALGGRSMGLLTANDFALPKFTWELALGLLIITGSC-ISWPTRQ--KWPLLVGIPIAVTTIVYAVFDRSKFEGYS--SFSPLSEWSNGTMGLISFNGFLETGF-YWIYILRTSFSIVINVSSILLILVDAICLQ 223
            GD+     +T E FLL A  ST+  G   N+P IVAPSVLY                           SA   S VS IPTALR+GAGCGIS+LVS LG R++G+L  N F+L  FTW++ +G  IIT +C  + P +Q  KW  ++G+P+ +T  +YAV DRSKF+GYS     PLS W  G  G I+F+   ET   YW YI RT  S+ INVSSILLIL+DA+CL+
Sbjct:   48 GDESVDQKSTFEAFLLVAGASTMAFGAFFNMPFIVAPSVLY---------------------------SAPETSFVSLIPTALRLGAGCGISVLVSVLGMRNIGVLVNNSFSLQAFTWQIIVGFGIITAACGKAAPEKQLKKWMHVLGVPMVITVAIYAVLDRSKFQGYSLADHPPLSNWGMGAFGTINFSELRETPRKYWFYISRTFLSVNINVSSILLILIDAVCLE 249          
BLAST of mRNA_C-tenellus_contig6879.1.1 vs. uniprot
Match: A0A2G6DP45_9GAMM (Adenine permease PurP n=1 Tax=Pasteurellales bacterium TaxID=2044943 RepID=A0A2G6DP45_9GAMM)

HSP 1 Score: 58.5 bits (140), Expect = 1.740e-6
Identity = 51/169 (30.18%), Postives = 81/169 (47.93%), Query Frame = 0
Query:   16 LAAALSTVMMGVITNLPIIVAPSVLYTRRSSFSVGDILA--------AQFVSNFCAAVVMGSALRLSLVSYIPTALRVGAGCGISILVSALGGRSMGLLTANDFALPKF----TWELALGLLIITGSCISWPTRQKWPLLVGIPIAVTTIVYAVFDRS-KFEGYSSFSP 171
            L AA+ ++ MG++TNLPI +AP++      SF V   L         A F+ +F   ++    +R  L+S IP+ LRVG G GI + ++ LG  +M ++ AN   L          + LG L +    +     + W +L  I   + TI+  +FD +  F G  S  P
Sbjct:   56 LIAAIGSIAMGLLTNLPIALAPAMGLNAFFSFVVVSKLGYSWQVGMGAIFLGSFSLFLLTLFKIRYWLISSIPSTLRVGIGAGIGLFIALLGFENMKIIVANPATLVTVGDLTNISVLLGTLGLFIILVLAARGKHWGVLASI--LIVTILGLIFDDNVSFHGVFSTPP 222          
BLAST of mRNA_C-tenellus_contig6879.1.1 vs. uniprot
Match: UPI0011F3647D (NCS2 family permease n=1 Tax=Siccirubricoccus phaeus TaxID=2595053 RepID=UPI0011F3647D)

HSP 1 Score: 57.4 bits (137), Expect = 4.270e-6
Identity = 52/167 (31.14%), Postives = 79/167 (47.31%), Query Frame = 0
Query:   16 LAAALSTVMMGVITNLPIIVAPSVLYTRRSSFSVGDI--------LAAQFVSNFCAAVVMGSALRLSLVSYIPTALRVGAGCGISILVSALGGRSMGLLTAND---FALPKFTWELALGLLIITGSCISWPTRQKWPLLVGIPIAVTTIVYAVFDRSKFEGYSSFSP 171
            LAAA+ +V+MG++ NLPI +AP +      +F             L A F+S      V    +R  L+  IP +L++G   GI   +  +G +SMGL+ A+      L K T E A  L +     I+  T ++ P  + + I VT  +   F  +KFEG  S  P
Sbjct:   55 LAAAIGSVLMGLLANLPIALAPGMGLNAYFAFXXXXXXXISWQVALGAVFLSGLLFLAVSLLRIREWLIGGIPLSLKLGIAAGIGFFLGLIGLKSMGLVVAHPATLVGLGKVT-EPATLLGVFGFLLIAVLTARRVPGAIVLGILVTAALGLPFGLTKFEGVVSLPP 220          
BLAST of mRNA_C-tenellus_contig6879.1.1 vs. uniprot
Match: A0A2W6UHK3_SPHSX (Guanine permease n=2 Tax=unclassified Sphingomonas TaxID=196159 RepID=A0A2W6UHK3_SPHSX)

HSP 1 Score: 57.0 bits (136), Expect = 5.850e-6
Identity = 47/169 (27.81%), Postives = 76/169 (44.97%), Query Frame = 0
Query:    1 GDDDYSVNATGEGFLLAAALSTVMMGVITNLPIIVAPSVLYTRRSSFSVGD--------ILAAQFVSNFCAAVVMGSALRLSLVSYIPTALRVGAGCGISILVSALGGRSMGLLTANDFALPKF-------TWELALGLLIITGSCISWPTRQKWPLLVGIPIAVTTIV 154
            G     V A       AAA + ++MG++ N+P+ +AP +      SF+V           L   F+S  C   +    +R ++V  +P  L      GI + +  +G R+ G++T++   +           W   LGL+IITG  I W  R +  +L+GI    TTIV
Sbjct:   46 GQAGMPVAAVAASTCFAAAFACILMGLVANMPLALAPGMGLNAYFSFTVVQGMGVPWPIALGCVFISGLCFLALTLGGVRQAIVRALPPHLLAATAGGIGLFIGFVGLRNAGIVTSSPATIVSLGNLHAPSAWLAILGLIIITGLSI-W--RVRGAILIGI--VATTIV 209          
BLAST of mRNA_C-tenellus_contig6879.1.1 vs. uniprot
Match: UPI00143A8882 (NCS2 family permease n=1 Tax=Falsiroseomonas selenitidurans TaxID=2716335 RepID=UPI00143A8882)

HSP 1 Score: 54.7 bits (130), Expect = 3.460e-5
Identity = 49/171 (28.65%), Postives = 76/171 (44.44%), Query Frame = 0
Query:   16 LAAALSTVMMGVITNLPIIVAPSVLYTRRSSFSVGDI--------LAAQFVSNFCAAVVMGSALRLSLVSYIPTALRVGAGCGISILVSALGGRSMGLLTANDFALPKF-------TWELALGLLIITGSCISWPTRQKWPLLVGIPIAVTTIVYAVFDRSKFEGYSSFSP 171
            LAAA+ +V+MGV+ N PI +AP +      +F+V           L A FVS     +V    +R  LV+ IP +L++G   GI   +  +G R MG++  N   L          T     G ++I G        +  P  + + I  T +V   F  ++F G +S  P
Sbjct:   55 LAAAIGSVLMGVLANFPIALAPGMGLNAYFAFAVVGAMGIPWQVALGAVFVSGLLFFLVSVLRIREWLVNGIPLSLKLGIAAGIGFFLGLIGLRGMGVVVDNPATLVGLGPLSTPSTLIACAGFVLIAGL-----VARAVPGAIVLGILATALVGLPFGLTEFRGIASLPP 220          
BLAST of mRNA_C-tenellus_contig6879.1.1 vs. uniprot
Match: UPI00193BAB5F (NCS2 family permease n=1 Tax=Clostridium sp. D2Q-11 TaxID=2683708 RepID=UPI00193BAB5F)

HSP 1 Score: 53.9 bits (128), Expect = 6.480e-5
Identity = 50/174 (28.74%), Postives = 83/174 (47.70%), Query Frame = 0
Query:    1 GDDDYSVNATGEGFLLAAALSTVMMGVITNLPIIVAPSVLYTRRSSFSV--------GDILAAQFVSNFCAAVVMGSALRLSLVSYIPTALRVGAGCGISILVSALGGRSMGLLTANDFALPKF-------TWELALGLLIITGSCISWPTRQKWPL------LVGIPIAVTTI 153
            G +D  V A      LAAAL +++MGV+ NLP  +AP +      SF +         + LAA F+S     ++  + LR  +V  IP +L+   G GI + ++ +G ++ G++ +    L  F       T    LGL I+TG  ++   +    +      L+GIP+ V+ I
Sbjct:   58 GFEDPVVLAIFASTCLAAALGSLLMGVLANLPFGLAPGMGLNAFFSFGIVIGMGYTWQEALAAVFISGILFIILTITGLREGIVDAIPDSLKRAIGGGIGLFIAFIGLQNAGIIVSAPDVLVGFGDFTNKGTIVAVLGL-IVTGVLMARGVKGSMLIGIVMATLIGIPMGVSNI 230          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6879.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G2T1_ECTSI7.120e-5046.72Putative transporter n=1 Tax=Ectocarpus siliculosu... [more]
A0A2G6DP45_9GAMM1.740e-630.18Adenine permease PurP n=1 Tax=Pasteurellales bacte... [more]
UPI0011F3647D4.270e-631.14NCS2 family permease n=1 Tax=Siccirubricoccus phae... [more]
A0A2W6UHK3_SPHSX5.850e-627.81Guanine permease n=2 Tax=unclassified Sphingomonas... [more]
UPI00143A88823.460e-528.65NCS2 family permease n=1 Tax=Falsiroseomonas selen... [more]
UPI00193BAB5F6.480e-528.74NCS2 family permease n=1 Tax=Clostridium sp. D2Q-1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..71
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 223..223
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..197
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 198..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 159..178
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 203..222
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 72..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 136..140
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 105..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 14..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6879contigC-tenellus_contig6879:1203..6752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6879.1.1mRNA_C-tenellus_contig6879.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6879 1203..6752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6879.1.1 ID=prot_C-tenellus_contig6879.1.1|Name=mRNA_C-tenellus_contig6879.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=223bp
GDDDYSVNATGEGFLLAAALSTVMMGVITNLPIIVAPSVLYTRRSSFSVG
DILAAQFVSNFCAAVVMGSALRLSLVSYIPTALRVGAGCGISILVSALGG
RSMGLLTANDFALPKFTWELALGLLIITGSCISWPTRQKWPLLVGIPIAV
TTIVYAVFDRSKFEGYSSFSPLSEWSNGTMGLISFNGFLETGFYWIYILR
TSFSIVINVSSILLILVDAICLQ
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