prot_C-tenellus_contig6857.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6857.1.1
Unique Nameprot_C-tenellus_contig6857.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length83
Homology
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BLAST of mRNA_C-tenellus_contig6857.1.1 vs. uniprot
Match: D8LTG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTG4_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 5.440e-20
Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 0 
Query:    1 SRLHLALTPEGFGTLRAATDRHLRRFQDKEFHIVPRRIMMQIQTSSSTAICNVLSKHNQTNTWQERDACVVEQCLSALYFHTY 83
            SR+ +AL  +    + +A D H R+F D  FH VPR+ MMQIQ+     +C VL K+N+TNTWQ +DACVVEQC+SAL  H +
Sbjct:    8 SRVCVALLFKKLCAMDSAQDAHARQFVDPSFHFVPRKKMMQIQSGCIDTMCQVLDKNNRTNTWQRKDACVVEQCMSALALHVH 90
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BLAST of mRNA_C-tenellus_contig6857.1.1 vs. uniprot
Match: A0A6H5JMY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMY2_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 2.970e-17
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 0 
Query:   17 AATDRHLRRFQDKEFHIVPRRIMMQIQTSSSTAICNVLSKHNQTNTWQERDACVVEQCLSALYFHTY 83
            +A D H R+F D  FH VPR+ MMQIQ+     +C VL K+N+TNTWQ +DACVVEQC+S L  H +
Sbjct:    3 SAQDAHARQFDDPSFHFVPRKKMMQIQSGCIDTMCQVLDKNNRTNTWQRKDACVVEQCMSTLVLHVH 69
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6857.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTG4_ECTSI5.440e-2050.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMY2_9PHAE2.970e-1755.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6857contigC-tenellus_contig6857:6215..6701 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6857.1.1mRNA_C-tenellus_contig6857.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6857 6215..6701 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6857.1.1 ID=prot_C-tenellus_contig6857.1.1|Name=mRNA_C-tenellus_contig6857.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=83bp
SRLHLALTPEGFGTLRAATDRHLRRFQDKEFHIVPRRIMMQIQTSSSTAI
CNVLSKHNQTNTWQERDACVVEQCLSALYFHTY
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