prot_C-tenellus_contig6855.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6855.1.2
Unique Nameprot_C-tenellus_contig6855.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length257
Homology
BLAST of mRNA_C-tenellus_contig6855.1.2 vs. uniprot
Match: D8LJ86_ECTSI (Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ86_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 8.970e-51
Identity = 78/121 (64.46%), Postives = 101/121 (83.47%), Query Frame = 0
Query:   40 SNRSLVRRPSTDSTRRLANRGLQDLYDWLGGQSWKCKTGWMDPGSEVRNWHGLTINNNGELESINLISNNLDGEIPDSVCDMISLRELNLSYNFEMRGWIPKAIGALTHLKTLHLYGAGLS 160
            S R+L R PS+ + RR+AN+GLQDLYDWLGG +WKC+ GW+DPGS+VR WHGLTI  +G+L SINLISN+L+GE+P+S+C++ SL+ LNLSYNF +RGWIP+ +G L  LKTLHLY A L+
Sbjct:   19 SGRTLARLPSSSTQRRMANQGLQDLYDWLGGDNWKCRDGWLDPGSDVREWHGLTITTSGDLVSINLISNDLEGEMPESLCNLYSLQHLNLSYNFGLRGWIPEGLGDLIKLKTLHLYSALLT 139          
BLAST of mRNA_C-tenellus_contig6855.1.2 vs. uniprot
Match: D7FV03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV03_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 1.680e-12
Identity = 30/58 (51.72%), Postives = 46/58 (79.31%), Query Frame = 0
Query:   54 RRLANRGLQDLYDWLGGQSWKCKTGWMDPGSEVRNWHGLTINNNGELESINLISNNLD 111
            RRLAN+ L D+++ LGG  W+ K+GW+ PG++V+ WHG+T+N  G L S+NL+SN+L+
Sbjct:   14 RRLANQALVDVFNALGGDRWRNKSGWLTPGTDVKKWHGVTVNA-GSLVSLNLMSNDLE 70          
BLAST of mRNA_C-tenellus_contig6855.1.2 vs. uniprot
Match: A0A6N9AKJ3_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6N9AKJ3_9BACT)

HSP 1 Score: 65.1 bits (157), Expect = 2.720e-8
Identity = 37/109 (33.94%), Postives = 60/109 (55.05%), Query Frame = 0
Query:   51 DSTRRLANRGLQDLYDWLGGQSWKCKTGWMDPGSEVRNWHGLTINNNGELESINLISNNLDGEIPDSVCDMISLRELNLSYNFEMRGWIPKAIGALTHLKTLHLYGAGL 159
            D+   +    L  LY+   G +W  +  W+   + +  WHG+TIN+ G++ S++L  NNL+G +P  + D+ SL  L+LS N  + G +P ++  L  L  L L G GL
Sbjct:  374 DNCEDMERSALIALYNAADGGNWTGRQNWLTA-APLSAWHGVTINDQGQVTSLDLADNNLEGTLPSRLSDLRSLSILDLSNNSSLSGPLPASLVGLG-LTVLKLGGTGL 480          
BLAST of mRNA_C-tenellus_contig6855.1.2 vs. uniprot
Match: A0A1G8C3U1_9FLAO (Leucine rich repeat-containing protein n=3 Tax=Bacteria TaxID=2 RepID=A0A1G8C3U1_9FLAO)

HSP 1 Score: 62.0 bits (149), Expect = 1.230e-7
Identity = 34/93 (36.56%), Postives = 55/93 (59.14%), Query Frame = 0
Query:   61 LQDLYDWLGGQSWKCKTGWMDPGSEVRNWHGLTINNNGELESINLISNNLDGEIPDSVCDMISLRELNLSYNFEMRGWIPKAIGALTHLKTLH 153
            L  LY    G+ WK +    D  + V  WHG+ + +  ++ +++L  NNL GEIP  + +++SL+EL+L  N ++ G IP AIG L  +K L+
Sbjct:   29 LVKLYQSTNGKQWKVR---WDLSAPVSTWHGIKVQDE-KVIAVHLADNNLVGEIPTDIVNLVSLQELDLHKN-QISGTIPSAIGKLKDMKVLN 116          
BLAST of mRNA_C-tenellus_contig6855.1.2 vs. uniprot
Match: A0A7S1Z4T5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z4T5_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.400e-7
Identity = 30/74 (40.54%), Postives = 47/74 (63.51%), Query Frame = 0
Query:   61 LQDLYDWLGGQSWKCKTGWMDPGSEVRNWHGLTINNNG--ELESINLISNNLDGEIPDSVCDMISLRELNLSYN 132
            L +LY+ LGG SWK + GW+DP   V +W G+T  ++    ++SI+L  N L G++P S+ ++  L E+N S N
Sbjct:  615 LTELYNSLGGASWKVQHGWLDPDISVCSWWGITCVSDSVVSVDSIHLNQNGLKGDVPSSLFELRYLDEINFSDN 688          
BLAST of mRNA_C-tenellus_contig6855.1.2 vs. uniprot
Match: A0A1W9X1W5_9DELT (Fibronectin type-III domain-containing protein n=1 Tax=Desulfobacteraceae bacterium 4572_88 TaxID=1972444 RepID=A0A1W9X1W5_9DELT)

HSP 1 Score: 61.2 bits (147), Expect = 3.730e-7
Identity = 33/85 (38.82%), Postives = 47/85 (55.29%), Query Frame = 0
Query:   61 LQDLYDWLGGQSWKCKTGWMDPGSEVRNWHGLTINNNGELESINLISNNLDGEIPDSV-CDMISLRELNLSYNFEMRGWIPKAIG 144
            L + Y+   G  W  KTGW+  G    +W G+T      + +INL+ NNL G +P S+  D+ +L+ELNL  N  + G IP  IG
Sbjct:   38 LINFYNSTAGSDWNVKTGWLGNGGTECDWEGITCEGGDTVTAINLVFNNLVGNLPVSLLADLSNLQELNLFGN-HLSGTIPPEIG 121          
BLAST of mRNA_C-tenellus_contig6855.1.2 vs. uniprot
Match: UPI0018CA9878 (leucine-rich repeat domain-containing protein n=2 Tax=unclassified Flavobacterium TaxID=196869 RepID=UPI0018CA9878)

HSP 1 Score: 59.7 bits (143), Expect = 7.670e-7
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 0
Query:   61 LQDLYDWLGGQSWKCKTGWMDPGSEVRNWHGLTINNNGELESINLISNNLDGEIPDSVCDMISLRELNLSYNFEMRGWIPKAIGALTHLKTL 152
            L  LY+   G  W  K     P   V +W+G+T+ +  ++ SINL +NNL GEIP+ + ++++L EL+L  N  + G +P  +G L +L TL
Sbjct:   29 LVKLYEKTNGNQWITKWDLTKP---VSSWYGVTVQDE-KVVSINLANNNLVGEIPNDIVNLVNLEELDLHKN-HISGTVPSLVGNLKNLTTL 115          
BLAST of mRNA_C-tenellus_contig6855.1.2 vs. uniprot
Match: A0A371QH94_9BACT (Uncharacterized protein n=2 Tax=Rhodohalobacter sp. SW132 TaxID=2293433 RepID=A0A371QH94_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 9.490e-7
Identity = 27/70 (38.57%), Postives = 40/70 (57.14%), Query Frame = 0
Query:   59 RGLQDLYDWLGGQSWKCKTGWMDPGSEVRNWHGLTINNNGELESINLISNNLDGEIPDSVCDMISLRELN 128
            R L+DLY    G  W   T W+D G+    W+G+  + NG +  ++L  NNLDG +P S+ ++  LR LN
Sbjct:   48 RALEDLYHATNGDQWTYNTAWLD-GNPTDRWYGVRTDRNGRVVRLDLYQNNLDGTLPQSIGNLTRLRYLN 116          
BLAST of mRNA_C-tenellus_contig6855.1.2 vs. uniprot
Match: A0A1V1NRM2_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Magnetoglobus multicellularis str. Araruama TaxID=890399 RepID=A0A1V1NRM2_9DELT)

HSP 1 Score: 58.5 bits (140), Expect = 1.470e-6
Identity = 34/113 (30.09%), Postives = 61/113 (53.98%), Query Frame = 0
Query:   61 LQDLYDWLGGQSWKCKTGWMDPGSEVRNWHGLTIN--NNGELESINL-----------ISNNLDGEIPDSVCDMISLRELNLSYNFEMRGWIPKAIGALTHLKTLHLYGAGLS 160
            L D+Y+  GG++W+   GW+        W+G+  +  +N  ++++ L           + NNL GE+P+S+ +++SL+ L LS N   +  +P  IG L +L+ L +Y   LS
Sbjct:   19 LVDIYNSTGGENWRNNEGWLGEAGTECEWYGIECSYPHNTFVQALRLYFPSPDPPHDIVGNNLTGELPESIQNLVSLKSLYLSCN---KLTLPPEIGNLYNLEHLEMYDNNLS 128          
BLAST of mRNA_C-tenellus_contig6855.1.2 vs. uniprot
Match: A0A6L8DNI5_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6L8DNI5_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 1.730e-6
Identity = 32/99 (32.32%), Postives = 56/99 (56.57%), Query Frame = 0
Query:   61 LQDLYDWLGGQSWKCKTGWMDPGSEVRNWHGLTINNNGELESINLISNNLDGEIPDSVCDMISLRELNLSYNFEMRGWIPKAIGALTHLKTLHLYGAGL 159
            L  LY+  GG +W     W+   + + +W+G+T N  G++ ++ L+ NN++G +P ++ D+  L  LNL+ N  + G +P+A+  L  L  L L G  L
Sbjct:  573 LLALYEAAGGMAWLGSGNWLTD-APLGDWYGVTTNAAGQVSTLVLVDNNMEGSLPPALGDLTGLTMLNLNGNDGLEGPLPRALVNL-ELDVLDLEGTNL 669          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6855.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D8LJ86_ECTSI8.970e-5164.46Leucine rich repeat protein n=2 Tax=Ectocarpus Tax... [more]
D7FV03_ECTSI1.680e-1251.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6N9AKJ3_9BACT2.720e-833.94Uncharacterized protein n=1 Tax=Gemmatimonadetes b... [more]
A0A1G8C3U1_9FLAO1.230e-736.56Leucine rich repeat-containing protein n=3 Tax=Bac... [more]
A0A7S1Z4T5_9STRA3.400e-740.54Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A1W9X1W5_9DELT3.730e-738.82Fibronectin type-III domain-containing protein n=1... [more]
UPI0018CA98787.670e-736.96leucine-rich repeat domain-containing protein n=2 ... [more]
A0A371QH94_9BACT9.490e-738.57Uncharacterized protein n=2 Tax=Rhodohalobacter sp... [more]
A0A1V1NRM2_9DELT1.470e-630.09Uncharacterized protein (Fragment) n=1 Tax=Candida... [more]
A0A6L8DNI5_9BACT1.730e-632.32Uncharacterized protein (Fragment) n=1 Tax=Gemmati... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 172..231
e-value: 5.6E-7
score: 29.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 58..250
e-value: 7.0E-40
score: 139.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR48065OS10G0469600 PROTEINcoord: 92..188
NoneNo IPR availablePANTHERPTHR48065:SF16OS10G0469600 PROTEINcoord: 135..209
NoneNo IPR availablePANTHERPTHR48065OS10G0469600 PROTEINcoord: 181..239
NoneNo IPR availablePANTHERPTHR48065OS10G0469600 PROTEINcoord: 135..209
NoneNo IPR availablePANTHERPTHR48065:SF16OS10G0469600 PROTEINcoord: 92..188
coord: 181..239
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 87..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6855contigC-tenellus_contig6855:266..2493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6855.1.2mRNA_C-tenellus_contig6855.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig6855 37..2956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6855.1.2 ID=prot_C-tenellus_contig6855.1.2|Name=mRNA_C-tenellus_contig6855.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=257bp
MRSRYTERETFGGMHRGIDERKHEHQYSMDPEPKLPSARSNRSLVRRPST
DSTRRLANRGLQDLYDWLGGQSWKCKTGWMDPGSEVRNWHGLTINNNGEL
ESINLISNNLDGEIPDSVCDMISLRELNLSYNFEMRGWIPKAIGALTHLK
TLHLYGAGLSGSIPESLGLLENLEELFLHLNYLEGQIPRSLGRLRSLRKL
LLNSNNLTGAVPVELSNLNKLDSLNLSWNSLAGEVPSAVLRMGGWRVPLS
TSDQET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf