prot_C-tenellus_contig6848.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6848.1.1
Unique Nameprot_C-tenellus_contig6848.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length235
Homology
BLAST of mRNA_C-tenellus_contig6848.1.1 vs. uniprot
Match: A0A6H5K9I9_9PHAE (MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I9_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 2.830e-78
Identity = 118/169 (69.82%), Postives = 141/169 (83.43%), Query Frame = 0
Query:    2 LRLKSDDEKFINLRAYGAWISILNTKVTSWDMIANTVDENLEDSRSYISALSEVINDPPDTCVGFAKKDRGEARLDIINSDVGYLGFAGTEAYGITYKVRGFCTDLSNQELFDRVQVRGNIRFSNIHHNYFGMYSYGHQDGLWEHNLMHNNAQYGFDPHDDSDNLRIHN 170
            +RLKSD  K I LRA+G W+S+LNT+++SWD+       N    RSY++A+SEV++ PP TCVG AK D GEAR DIINS+V +LG  GTEAYGIT+KVRGFC DLSN++LFDRV VRG+IRFS+IHHNYFGMY+YGHQDGLWE+NLMH NA+YGFDPHDDSDNLRIHN
Sbjct:  129 MRLKSDS-KVIELRAHGGWLSLLNTELSSWDVDEADYASNYSAPRSYVTAISEVLDSPPQTCVGHAKNDAGEARFDIINSEVHHLGHYGTEAYGITWKVRGFCVDLSNEDLFDRVNVRGDIRFSDIHHNYFGMYTYGHQDGLWEYNLMHENAKYGFDPHDDSDNLRIHN 296          
BLAST of mRNA_C-tenellus_contig6848.1.1 vs. uniprot
Match: D7G1G1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G1_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 4.180e-68
Identity = 111/173 (64.16%), Postives = 131/173 (75.72%), Query Frame = 0
Query:    1 ELRLKSDDEKFINLRAYGAWISILNTKVTSWDMIANTVDENLEDS---RSYISALSEVINDPPDTCVGFAKKDRGEARLDIINSDVGYLGFAGTEAYGITYKVRGFCTDLSNQELFDRVQVRGNIRFSNIHHNYFGMYSYGHQDGLWEHNLMHNNAQYGFDPHDDSDNLRIHN 170
            ELR+ S     ++L  +G +ISILNTKVTSW +     D    D    RSY+SA+SE+ + P DTC G A  D GEARLDIINSDVGYLG+   E+YG+TYKVRG+CTD SN E+FDRV VRG+IRFS+IHHN+FG YSYGHQDGLWE+N M N+  YGFDPHDDSDNLRIHN
Sbjct:  121 ELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTH-PSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHN 292          
BLAST of mRNA_C-tenellus_contig6848.1.1 vs. uniprot
Match: D7FZF8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF8_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 4.670e-66
Identity = 109/169 (64.50%), Postives = 127/169 (75.15%), Query Frame = 0
Query:    2 LRLKSDDEKFINLRAYGAWISILNTKVTSWDMIANTVDENLEDSRSYISALSEVINDPPDTCVGFAKKDRGEARLDIINSDVGYLGFAGTEAYGITYKVRGFCTDLSNQELFDRVQVRGNIRFSNIHHNYFGMYSYGHQDGLWEHNLMHNNAQYGFDPHDDSDNLRIHN 170
            L L S  EKFINLRA+G  + +  T V SWD+ A TVDEN ED RSY+SA+SEVI DP +TC G AK D GEAR+DII+S+V +LG+  +E+YGI YKVRGFC DLSN ELFD V V G+I  S+IH NYFG YSYGHQ G W HN MH+N  YGFDPHDDSD + IHN
Sbjct:  147 LLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPAETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYITIHN 315          
BLAST of mRNA_C-tenellus_contig6848.1.1 vs. uniprot
Match: D8LKL1_ECTSI (Mannuronan C-5 epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKL1_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 3.080e-64
Identity = 108/177 (61.02%), Postives = 129/177 (72.88%), Query Frame = 0
Query:    2 LRLKSDDEKFINLRAYGAWISILNTKVTSWDMIANTVDENLEDSRSYISALSEVINDPPDTCVGFAKKDRGEARLDIINSDVG--------YLGFAGTEAYGITYKVRGFCTDLSNQELFDRVQVRGNIRFSNIHHNYFGMYSYGHQDGLWEHNLMHNNAQYGFDPHDDSDNLRIHN 170
            +RLKSD  K I LRA+G W+S+LNT+++SWD+       N    RSY++A+SEV+  PP TCVG AK D GEAR D   SDV         +  F   + Y    +VRGFC DLSN++LFDRV VRGNIRFS+IHHNYFGMY+YGHQDGLWE+NLMH NA+YGFDPHDDSDNLRIHN
Sbjct:   53 MRLKSDS-KVIELRAHGGWLSLLNTELSSWDVDEADYASNYSAPRSYVTAISEVLETPPQTCVGHAKNDAGEARFD---SDVEPRAAPSAQHTRFFSLQTYA-RQQVRGFCVDLSNEDLFDRVNVRGNIRFSDIHHNYFGMYTYGHQDGLWEYNLMHENAKYGFDPHDDSDNLRIHN 224          
BLAST of mRNA_C-tenellus_contig6848.1.1 vs. uniprot
Match: A0A6H5KES9_9PHAE (MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KES9_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 9.980e-63
Identity = 99/169 (58.58%), Postives = 124/169 (73.37%), Query Frame = 0
Query:    1 ELRLKSDDEKFINLRAYGAWISILNTKVTSWDMIANTVDENLEDSRSYISALSEVINDPPDTCVGFAKKDRGEARLDIINSDVGYLGFAGTEAYGITYKVRGFCTDLSNQELFDRVQVRGNIRFSNIHHNYFGMYSYGHQDGLWEHNLMHNNAQYGFDPHDDSDNLRIH 169
            ELRL S  E FINLRA+G  +  ++TKV SWD   N+ DE+  D RSYISA+SE+I D  +TC G AK   GEAR+DI +S++GYLG+  +E+YG+T+KVRGFC D SN E+FD V V GN+  S+IHH  FG+Y+YGHQ G W  N MH+N+ YGFDPHDDSD L IH
Sbjct:   24 ELRLLSTSETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIH 192          
BLAST of mRNA_C-tenellus_contig6848.1.1 vs. uniprot
Match: A0A6H5KBD3_9PHAE (MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD3_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 5.650e-62
Identity = 110/189 (58.20%), Postives = 128/189 (67.72%), Query Frame = 0
Query:    2 LRLKSDDEKFINLRAYGAWISILNTKVTSWDMIANTVDENLEDSRSYISALSEVINDPPDTCVGFAKKDRGEARLDIINSDVGY--------------------LGFAGTEAYGITYKVRGFCTDLSNQELFDRVQVRGNIRFSNIHHNYFGMYSYGHQDGLWEHNLMHNNAQYGFDPHDDSDNLRIHN 170
            L L S  EKFIN+RA+G  + +  T V SWD+ A TVDEN ED RSY+SA+SEVI DP +TC G AK D GEAR+DII+S+V                      LG+  +E+YGI+YKVRGFCTDLSN ELFD V V G+I  S+IH NYFG YSYGHQ G W HN MH+N  YGFDPHDDSD L IHN
Sbjct:  107 LLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNRTTQTSHSAPLTSRLPQYKTDLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYLTIHN 295          
BLAST of mRNA_C-tenellus_contig6848.1.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 2.120e-61
Identity = 102/169 (60.36%), Postives = 122/169 (72.19%), Query Frame = 0
Query:    1 ELRLKSDDEKFINLRAYGAWISILNTKVTSWDMIANTVDENLEDSRSYISALSEVINDPPDTCVGFAKKDRGEARLDIINSDVGYLGFAGTEAYGITYKVRGFCTDLSNQELFDRVQVRGNIRFSNIHHNYFGMYSYGHQDGLWEHNLMHNNAQYGFDPHDDSDNLRIH 169
            ELRL S  + FI+LRAYG  +  L+TKV +WD   N  D++  D RSYISA+SEVI D   TC G AK + GEAR+DI NS++ YLG+ GTE YG+T+KVRGFC D  N ELFD V V GNI  S+IHHN FG+Y+YGHQ G W  N MH+N+ YGFDPHDDSD L IH
Sbjct:  101 ELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIH 269          
BLAST of mRNA_C-tenellus_contig6848.1.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 3.020e-61
Identity = 99/169 (58.58%), Postives = 125/169 (73.96%), Query Frame = 0
Query:    1 ELRLKSDDEKFINLRAYGAWISILNTKVTSWDMIANTVDENLEDSRSYISALSEVINDPPDTCVGFAKKDRGEARLDIINSDVGYLGFAGTEAYGITYKVRGFCTDLSNQELFDRVQVRGNIRFSNIHHNYFGMYSYGHQDGLWEHNLMHNNAQYGFDPHDDSDNLRIH 169
            ELRL S +E FINLRA+G  +  ++TKV SWD   N+ DE+  D RSYISA+SE+I D  +TC G AK   GEAR+DI +S++GYLG+  +E+YG+T+KVRGFC D SN E+FD V V GN+  S+IHH  FG+Y+YGHQ G W  N MH+N+ YGFDPHDDSD L IH
Sbjct:  130 ELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIH 298          
BLAST of mRNA_C-tenellus_contig6848.1.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 3.330e-61
Identity = 98/169 (57.99%), Postives = 122/169 (72.19%), Query Frame = 0
Query:    1 ELRLKSDDEKFINLRAYGAWISILNTKVTSWDMIANTVDENLEDSRSYISALSEVINDPPDTCVGFAKKDRGEARLDIINSDVGYLGFAGTEAYGITYKVRGFCTDLSNQELFDRVQVRGNIRFSNIHHNYFGMYSYGHQDGLWEHNLMHNNAQYGFDPHDDSDNLRIH 169
            ELRL S  + +INLRA+G  +  + TKV SWD   N+ DE+  D RSYISA+SE+I D  +TC G AK   GEAR+DI NS++GYLGF  +E+YG+T+KVRGFC D SN  +FD V V GN+  S+IHH  FG+Y+YGHQ G W  N MH+N+ YGFDPHDDSD L IH
Sbjct:  133 ELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIH 301          
BLAST of mRNA_C-tenellus_contig6848.1.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 1.060e-60
Identity = 100/169 (59.17%), Postives = 125/169 (73.96%), Query Frame = 0
Query:    1 ELRLKSDDEKFINLRAYGAWISILNTKVTSWDMIANTVDENLEDSRSYISALSEVINDPPDTCVGFAKKDRGEARLDIINSDVGYLGFAGTEAYGITYKVRGFCTDLSNQELFDRVQVRGNIRFSNIHHNYFGMYSYGHQDGLWEHNLMHNNAQYGFDPHDDSDNLRIH 169
            ELRL S  + FINLRA+G  +  L+TKV +WD   N  D + ED RSY+SA+SEVI D   TC G AK + GEAR+DI +S++GYLG+ G+E+YG+T+KVRGFC D SN +LF+ V V GNI  S+IHHN FG+Y+YGHQ G W  N MH+N+ YGFDPHDDSD L IH
Sbjct:  127 ELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIH 295          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6848.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9I9_9PHAE2.830e-7869.82MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G1G1_ECTSI4.180e-6864.16Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FZF8_ECTSI4.670e-6664.50Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LKL1_ECTSI3.080e-6461.02Mannuronan C-5 epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KES9_9PHAE9.980e-6358.58MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34... [more]
A0A6H5KBD3_9PHAE5.650e-6258.20MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
Q7XAJ8_9PHAE2.120e-6160.36Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FXE5_ECTSI3.020e-6158.58Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JU98_9PHAE3.330e-6157.99MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
Q7XAJ7_9PHAE1.060e-6059.17Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 187..209
e-value: 3.4
score: 16.6
coord: 211..233
e-value: 1.3
score: 18.0
coord: 163..185
e-value: 4.7
score: 16.2
coord: 117..138
e-value: 10000.0
score: 0.0
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..235
e-value: 1.5E-68
score: 233.5
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 121..233
e-value: 6.7E-16
score: 58.6
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 187..225
e-value: 2.5E-6
score: 25.1
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 102..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6848contigC-tenellus_contig6848:84..6514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6848.1.1mRNA_C-tenellus_contig6848.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6848 84..6514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6848.1.1 ID=prot_C-tenellus_contig6848.1.1|Name=mRNA_C-tenellus_contig6848.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=235bp
ELRLKSDDEKFINLRAYGAWISILNTKVTSWDMIANTVDENLEDSRSYIS
ALSEVINDPPDTCVGFAKKDRGEARLDIINSDVGYLGFAGTEAYGITYKV
RGFCTDLSNQELFDRVQVRGNIRFSNIHHNYFGMYSYGHQDGLWEHNLMH
NNAQYGFDPHDDSDNLRIHNNIVYGNGNHGIIASKRCDDVSIQNNIVYDN
LNAGIMLHRSSNQAIVRNNTLSNNGDACIAIFESF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR022441Para_beta_helix_rpt-2
IPR011050Pectin_lyase_fold/virulence