prot_C-tenellus_contig6843.3.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig6843.3.2
Unique Name	prot_C-tenellus_contig6843.3.2
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	363

Homology

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BLAST of mRNA_C-tenellus_contig6843.3.2 vs. uniprot
Match: D8LJ81_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ81_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 4.210e-24
Identity = 59/130 (45.38%), Postives = 88/130 (67.69%), Query Frame = 0

Query:  228 VWSSRDDIIAGVIRRNILEGHSDFLLLGPEGDKKDCLACAKKIWKAFRRRQKDLDGVLSPADANSISVNASELAGVLGELGMQLSPTEMAYLIERCATRIRPGSRPSPGGRDEATIRAGDLLSFFRELLT 357
            V  +RDD IA  IR N+++G S+  L G + D +  L+CA  + +AFR R+++L G   P   +  SV AS+L GVL ++G+ L+PT+ A+LI++C +   PG RP  GG DEA +RAGD+L+FFR+LL+
Sbjct: 1507 VRRTRDDPIAQSIRSNVMQGRSELRLAGGDADSR--LSCAVHLRRAFRTRRRNLGG--DPGGVDDCSVAASDLNGVLQDMGVILNPTQAAFLIQKCRSPTTPGRRPPAGGMDEAPVRAGDVLAFFRDLLS 1632

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig6843.3.2 vs. uniprot

BLAST of mRNA_C-tenellus_contig6843.3.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LJ81_ECTSI	4.210e-24	45.38	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..195

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig6843	contig	C-tenellus_contig6843:2982..6535 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig6843.3.2	mRNA_C-tenellus_contig6843.3.2	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig6843 2313..6800 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig6843.3.2 ID=prot_C-tenellus_contig6843.3.2|Name=mRNA_C-tenellus_contig6843.3.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=363bp
MSSVMCWKQDQGDTSNIIPPSQDIPLPPPSINNHEVLISPDRARGERLPQ
DIGKASPEGRQTVEPHVGKGGGGVESSRQSCIYRRENGSFIGRRSDGGRQ
ESDGCISAAGGRSGLHLPEGLGGRRGSVGKAAALEGEGAKLAISWQAVDA
RREGRGRGVGDGEKEAADEGQLGLIEQLTTRQRGTKSGQMHEVTEMSPHR
TSELGEGEGDPSMTSLRSRLLSEPDKSVWSSRDDIIAGVIRRNILEGHSD
FLLLGPEGDKKDCLACAKKIWKAFRRRQKDLDGVLSPADANSISVNASEL
AGVLGELGMQLSPTEMAYLIERCATRIRPGSRPSPGGRDEATIRAGDLLS
FFRELLTRSNMW*