prot_C-tenellus_contig684.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig684.1.1
Unique Nameprot_C-tenellus_contig684.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length98
Homology
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BLAST of mRNA_C-tenellus_contig684.1.1 vs. uniprot
Match: A0A6H5JPR7_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPR7_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 4.200e-6
Identity = 33/56 (58.93%), Postives = 37/56 (66.07%), Query Frame = 0 
Query:   42 GAVSRRLPSEEQQVLRTKGRFKIIPQSKVPVSGAATVRKGKPPLTAKQKLLAKMKR 97
            G V RRL   +Q+ LR+KG FKI P SKVP        K K PLTAKQKLLAKM+R
Sbjct:  870 GGVQRRLSVTKQEALRSKGMFKIAPPSKVPPKP-----KEKKPLTAKQKLLAKMRR 920
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BLAST of mRNA_C-tenellus_contig684.1.1 vs. uniprot
Match: D7FTJ5_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ5_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 7.850e-6
Identity = 32/56 (57.14%), Postives = 37/56 (66.07%), Query Frame = 0 
Query:   42 GAVSRRLPSEEQQVLRTKGRFKIIPQSKVPVSGAATVRKGKPPLTAKQKLLAKMKR 97
            G V RRL   +Q+ LR+KG FKI P SKVP        K K PLTAKQKL+AKM+R
Sbjct:  899 GGVQRRLSVTKQEALRSKGMFKIAPPSKVPPKP-----KEKKPLTAKQKLMAKMRR 949
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig684.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPR7_9PHAE4.200e-658.93JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FTJ5_ECTSI7.850e-657.14JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig684contigC-tenellus_contig684:12976..14178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig684.1.1mRNA_C-tenellus_contig684.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig684 12249..17306 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig684.1.1 ID=prot_C-tenellus_contig684.1.1|Name=mRNA_C-tenellus_contig684.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=98bp
MLKGTARRANLGPIGSTVRGQGPPPHKAAVRRGPVEVHAGKGAVSRRLPS
EEQQVLRTKGRFKIIPQSKVPVSGAATVRKGKPPLTAKQKLLAKMKR*
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