prot_C-tenellus_contig681.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig681.1.1
Unique Nameprot_C-tenellus_contig681.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length406
Homology
BLAST of mRNA_C-tenellus_contig681.1.1 vs. uniprot
Match: D8LGK8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK8_ECTSI)

HSP 1 Score: 376 bits (965), Expect = 5.290e-124
Identity = 224/464 (48.28%), Postives = 280/464 (60.34%), Query Frame = 0
Query:    9 VEKVDTADVVWNELRRLRDDIPPPLEDG-YPDDRACDAFHKADQAVAALCAIPREEMLGGFSKLVEGERLSDLLATLAGSTDHPALQHACLMVMCGVAGLNRAHDAICSRPDILKTLFSILAKPKQYRISSIGA--EEELEVNPAVGAIICLNSLLVSCGGLKAEDVTVWEELGALCAIASALEGHAAFLGGGDEDVLPAMLFGLATPLLRAHQPSDLL------------------------------------------ED--------------------RLRLSTAFLVLVADRREWVARSLAMAANTTQAD-PAGLAGQPQPVTVDNLLVSSLSLPGLFGAACQKTSVRLRARAVAAARECEREGSYSPGFAEALARCLGLGGQKAVRR-----AAQAALNEVRAKHPHVLCSNPGCGETQDQYATGGLFKRCARCQSSLYCSGECQVAHWKNGHKTAC 401
            V+  D A  VW E+ +LRD+IPPP   G YPDD+A  AF  AD AVA+LC +PRE+ML GF++LVEG RL+DLL  L  S  HPALQH+CLMV+CGVA L +AH AI  R D+L+ L   LA P  ++IS  G+  E++L++NP+VG+ ICLNSLLVSCGGL  + + VW+EL AL AI SALE H+ F GGGDEDVLPAMLFGLATPLL   Q                                               ED                    R RL+ AFL L+A+RREWVARSLAMAAN +  D   G A    PVT++NLLV+SL+   L GA  + T VRLRA+AVAAAR+CE +G+++PGF   LAR LGLGGQ+ + R       Q   N+  A+  ++ C+   CG+ Q   + G  FK C+RCQ ++YCSGECQ AHWK  HK  C
Sbjct:   12 VKSNDVAKAVWAEIVKLRDEIPPPPAGGLYPDDKAAKAFQAADAAVASLCGVPREQMLEGFTQLVEGSRLNDLLNALVASEGHPALQHSCLMVLCGVASLQQAHVAITERRDVLQALLKALASPTAHQISPEGSVGEDDLQINPSVGSAICLNSLLVSCGGLGEDTINVWQELDALSAITSALESHSVFEGGGDEDVLPAMLFGLATPLLTNFQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDATAGAGAVVDAETDKASRAARQRLAEAFLRLLAERREWVARSLAMAANASPTDLSGGGATAAAPVTINNLLVNSLAHADLLGAFTRLTPVRLRAQAVAAARQCETDGTFAPGFGAQLARLLGLGGQQELNRRMAGHTVQKIKNKEAARAANIKCAM--CGKRQGNASGGAKFKVCSRCQVAMYCSGECQKAHWKT-HKMEC 472          
BLAST of mRNA_C-tenellus_contig681.1.1 vs. uniprot
Match: A0A6H5JNJ8_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNJ8_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 3.460e-51
Identity = 146/428 (34.11%), Postives = 205/428 (47.90%), Query Frame = 0
Query:   14 TADVVWNELRRLRDDIPPPLEDG-------------YPDDRACDAFHKADQAVAALCAIPREEMLGGFSKLVEGERLSDLLATL--AGSTDHPALQHACLMVMCGVAGLNRAHDAICSRPDILKTLFSILAKPKQYRIS--SIGAEEELEVNPAVGAIICLNSLLVSCGGLKAEDVTVWEELGALCAIASALEGHAAFLGG----GDEDVLPAMLFGLATPLLRAHQPSDLLEDRLRLSTAFLVLVADRREWVARSLAMAANTTQADPAGLAGQPQPVTVDNLLVSSLSLPGLFGAACQKTSVRLRARAVAAARECEREGS------YSPGFAEALARCL--------GLGGQKAVRRAAQAALNEVR-----AKHPHVLCSNPGCGETQDQYATGGLFKRCARCQSSLYCSGECQVAHWKNGHKTAC 401
            ++  +W ELR+LRDDIPPP+++              Y D  A  A ++   A+    A+PR++ L  F +LV G RL +LL     + S  HPALQ+ACL+ + GVA L+     + +RPD++K L +++A P+Q  ++  S GA     VN A GA+  +  L  S G L+     +W ELGA+ A+AS LE HA F       GD   LP   F +AT LL     S   ED+LRL  A+L +  +   W+A   A                       +LL    + P       ++   +LRA AVAAARECEREG+      +  G A+ LA  L          GG+   RR A    + V+       +PH   S    G+     A    FKRC++C +  YCS ECQ A WK  H+ AC
Sbjct:    7 SSSKIWQELRKLRDDIPPPVDNNTGSNKGDQESSTCYKDFAAFAACNEVRVAIGRSSALPRDQFLAIFRQLVAGPRLDELLELFKFSRSPPHPALQYACLVALHGVAELSDRRKDLLTRPDVVKELCAVMASPRQRLVTPTSAGAGGVEIVNAAAGAVTTITGLFTSNGPLEPPYAKLWVELGAVSALASCLENHAVFDRSNPVSGD---LPLCFFLIATSLLAGAADSVSEEDKLRLGKAWLTVFLEATRWIADEAA-----------------------DLLADFYTRPNWLKNIVERMPEKLRASAVAAARECEREGTGSGSSPWKGGKADRLALALLCGNAYNWDAGGELVGRRCAGPRCDRVQKCGHGGGNPHPAASEDEGGDG----AASVAFKRCSQCHAVGYCSRECQKAGWKK-HRKAC 403          
BLAST of mRNA_C-tenellus_contig681.1.1 vs. uniprot
Match: A0A6H5KPW0_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW0_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 4.700e-40
Identity = 133/423 (31.44%), Postives = 195/423 (46.10%), Query Frame = 0
Query:   14 TADVVWNELRRLRDDIPPPLEDGYPDDRACDAFHKADQAVAALCAIPREEMLGGFSKLVEGERLSDLLATLAGSTDHPALQHACLMVMCGVAGLNRAHDAICSRPDILKTLFSILAKPKQYRISSIGAEEELEVNPAVGAIICLNSLLVSCGGLKAEDVTVWEELGALCAIASALEGHAAFLGGGDEDVLPAMLFGLATPLLRAHQPSDLLEDRLRLSTAFLVLVADRREWVARSLAMAANTTQADPAGLAGQPQPVTVDNLLVSSLSLPGLFGAACQKTSVRLRARAVAAARECEREGSYSPGFA-------------------EALARCLGLG------------GQKAV---RRAAQAALNEV-RAKHPHVLCSNPGCGETQDQYATGGLFKRCARCQSSLYCSGECQVAHWKNGHKTAC 401
            TADV+W+++R+LRD  P   E  YPD+    A      A+    +  RE +L  ++K+ +G+RL DL++   GS +HPAL++ACL ++  V  L + H  +  R D++KTL ++L +P+   IS      +  + PA  A   L+ L  + GGLK      W  LGAL AI+SALE +AA      +   P ++F ++  LL     +  L+DR R++   L L  +RR WVA       +  +    G A    P+ + N  V         G +    +VRL A  ++        G    G A                    A A   G+G            G K V   R      L+++ R     VLCS   CG  Q     G  FKRC RC++++YCS +CQVAHWK  HK  C
Sbjct:   20 TADVLWDQIRKLRDCAPMEGE-FYPDEEPAKALAAISVALKPWSSASRETLLSMYAKIADGKRLDDLISLFLGSQEHPALRYACLELLGFVGQLKQTHRRLLCRMDVIKTLLTVLERPRIVPISPYCPSND--ICPAAEAARVLSVLCAAEGGLKGAHAEEWVSLGALGAISSALEFNAAIPDYFTD--FPMVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGSLFEGPLRGEALMRAPLELRNQAVKQAEDFIAEGFSLGGWAVRLVAAILS--ESPADGGGGGDGVAGNXXXXXXXXXXXXXXVTDSASATAGGVGPTSGVSGPVRPSGGKQVPSTRGHLNVVLSDIKRGADAAVLCSRETCGRRQGDVKEG--FKRCGRCRTTVYCSKDCQVAHWKEKHKMEC 433          
BLAST of mRNA_C-tenellus_contig681.1.1 vs. uniprot
Match: A0A196SGB7_BLAHN (MYND-type zinc finger protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGB7_BLAHN)

HSP 1 Score: 68.9 bits (167), Expect = 3.930e-10
Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 0
Query:  354 CSNPGCGETQDQYATGGLFKRCARCQSSLYCSGECQVAHWKNGHKTAC---GGK 404
            CSNP CG T+ +    G FK+C+RC+++ YCS ECQ+ HWKNGHK  C   GGK
Sbjct:    7 CSNPNCGNTESK---PGEFKKCSRCKTACYCSKECQLEHWKNGHKKECVPVGGK 57          
BLAST of mRNA_C-tenellus_contig681.1.1 vs. uniprot
Match: A0A836BVI8_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BVI8_9CHLO)

HSP 1 Score: 67.8 bits (164), Expect = 1.610e-8
Identity = 41/99 (41.41%), Postives = 46/99 (46.46%), Query Frame = 0
Query:  306 RECEREGSYSPGFAEALARCLGLGGQKAVRRAAQAALNEVRAKHPHVLCSNPGCGETQDQYATGGLFKRCARCQSSLYCSGECQVAHWKNGHKTACGGK 404
            RE  +EG   PG A    R   L   KA          E RA  P   C+NP C         G   +RCA CQ+  YC  ECQ AHW+ GHK ACGGK
Sbjct:  587 REAPKEGPLPPGIALLAERLAAL---KA----------EARALLP--ACANPACANLAGDSEAGLRLQRCAGCQAVSYCCKECQTAHWRAGHKAACGGK 670          
BLAST of mRNA_C-tenellus_contig681.1.1 vs. uniprot
Match: D7FZ19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ19_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 1.930e-8
Identity = 31/81 (38.27%), Postives = 49/81 (60.49%), Query Frame = 0
Query:   14 TADVVWNELRRLRDDIPPPLEDGYPDDRACDAFHKADQAVAALCAIPREEMLGGFSKLVEGERLSDLLATLAGSTDHPALQ 94
            TADV+W+++R+LRD  P   E  YPD+    A      A+    +  RE +L  ++K+ +G+RL DL++   GS +HPAL+
Sbjct:   20 TADVLWDQIRKLRDCAPMEGE-FYPDEEPAKALAAISVALKPWSSASRETLLSMYAKIADGKRLDDLISLFLGSQEHPALR 99          
BLAST of mRNA_C-tenellus_contig681.1.1 vs. uniprot
Match: A0A836BTC3_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BTC3_9CHLO)

HSP 1 Score: 66.6 bits (161), Expect = 3.990e-8
Identity = 30/64 (46.88%), Postives = 37/64 (57.81%), Query Frame = 0
Query:  341 ALNEVRAKHPHVLCSNPGCGETQDQYATGGLFKRCARCQSSLYCSGECQVAHWKNGHKTACGGK 404
            AL   RA  P  +C+NP C         G   ++CARC+ + YC  ECQ AHWK GHK ACGG+
Sbjct:  687 ALAAARALLP--VCANPACANLSGDSEAGLRLQQCARCKQAAYCCKECQTAHWKAGHKEACGGR 748          
BLAST of mRNA_C-tenellus_contig681.1.1 vs. uniprot
Match: A0A835XMW0_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XMW0_9CHLO)

HSP 1 Score: 60.1 bits (144), Expect = 3.630e-7
Identity = 25/59 (42.37%), Postives = 31/59 (52.54%), Query Frame = 0
Query:  344 EVRAKHPHVLCSNPGCGETQDQYATGGLFKRCARCQSSLYCSGECQVAHWKNGHKTACG 402
            E R +     CSNP C         G   ++C RC  + YC  ECQ AHW++GHK ACG
Sbjct:   96 EARRRLGLPACSNPACANLAGDSEAGLRLQQCGRCGRASYCCRECQTAHWRSGHKEACG 154          
BLAST of mRNA_C-tenellus_contig681.1.1 vs. uniprot
Match: A0A835XR20_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XR20_9CHLO)

HSP 1 Score: 62.8 bits (151), Expect = 7.220e-7
Identity = 27/60 (45.00%), Postives = 31/60 (51.67%), Query Frame = 0
Query:  344 EVRAKHPHVLCSNPGCGETQDQYATGGLFKRCARCQSSLYCSGECQVAHWKNGHKTACGG 403
            E R +     CSNP C         G L + C RC+   YC  ECQ AHW+ GHK ACGG
Sbjct:  853 EARRRLGLPACSNPACVSLAGDSEAGRLLQLCGRCRREAYCCRECQTAHWRAGHKEACGG 912          
BLAST of mRNA_C-tenellus_contig681.1.1 vs. uniprot
Match: A0A836BZH3_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BZH3_9CHLO)

HSP 1 Score: 62.8 bits (151), Expect = 7.280e-7
Identity = 26/60 (43.33%), Postives = 32/60 (53.33%), Query Frame = 0
Query:  344 EVRAKHPHVLCSNPGCGETQDQYATGGLFKRCARCQSSLYCSGECQVAHWKNGHKTACGG 403
            E R +     CSNP C         G   ++C RC  + YC  ECQ AHW++GHK ACGG
Sbjct:  875 EARRRLGLPACSNPACANLAGDSEAGRQLQQCGRCGRASYCCRECQTAHWRSGHKEACGG 934          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig681.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGK8_ECTSI5.290e-12448.28MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JNJ8_9PHAE3.460e-5134.11MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KPW0_9PHAE4.700e-4031.44MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A196SGB7_BLAHN3.930e-1055.56MYND-type zinc finger protein n=1 Tax=Blastocystis... [more]
A0A836BVI8_9CHLO1.610e-841.41MYND-type domain-containing protein n=1 Tax=Edapho... [more]
D7FZ19_ECTSI1.930e-838.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836BTC3_9CHLO3.990e-846.88MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A835XMW0_9CHLO3.630e-742.37MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A835XR20_9CHLO7.220e-745.00MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A836BZH3_9CHLO7.280e-743.33MYND-type domain-containing protein n=1 Tax=Edapho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.2220coord: 352..403
e-value: 1.6E-10
score: 42.6
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 367..402
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 372..401
e-value: 2.0E-8
score: 34.2
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 356..401
score: 11.067

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig681contigC-tenellus_contig681:7278..8495 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig681.1.1mRNA_C-tenellus_contig681.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig681 7031..10017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig681.1.1 ID=prot_C-tenellus_contig681.1.1|Name=mRNA_C-tenellus_contig681.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=406bp
MGSGDQDEVEKVDTADVVWNELRRLRDDIPPPLEDGYPDDRACDAFHKAD
QAVAALCAIPREEMLGGFSKLVEGERLSDLLATLAGSTDHPALQHACLMV
MCGVAGLNRAHDAICSRPDILKTLFSILAKPKQYRISSIGAEEELEVNPA
VGAIICLNSLLVSCGGLKAEDVTVWEELGALCAIASALEGHAAFLGGGDE
DVLPAMLFGLATPLLRAHQPSDLLEDRLRLSTAFLVLVADRREWVARSLA
MAANTTQADPAGLAGQPQPVTVDNLLVSSLSLPGLFGAACQKTSVRLRAR
AVAAARECEREGSYSPGFAEALARCLGLGGQKAVRRAAQAALNEVRAKHP
HVLCSNPGCGETQDQYATGGLFKRCARCQSSLYCSGECQVAHWKNGHKTA
CGGKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND