prot_C-tenellus_contig11588.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig11588.1.2
Unique Nameprot_C-tenellus_contig11588.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length210
Homology
BLAST of mRNA_C-tenellus_contig11588.1.2 vs. uniprot
Match: D7FN00_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN00_ECTSI)

HSP 1 Score: 388 bits (996), Expect = 5.240e-125
Identity = 189/210 (90.00%), Postives = 201/210 (95.71%), Query Frame = 0
Query:    1 GELVAADEKRFRHLRSLAEKEILQAADVICTTCVGAGDPRLCNLNLRFRQVLIDEATQAMEAECLIPIVLGAKQLVLVGDHCQLGPVVLCKKSAKAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERTMSQIEFPWPMPSKPMFFLMSSGVEEISSSGTSYLNRTEAAVVEKCVTRFLKNGLIPEQIGV 210
            GELVAADEKRFR LRS AE+EILQAADVICTTCVGAGDPRL N+NLRFRQVLIDEATQAMEAECLIPIV+GAKQLVLVGDHCQLGPVVLCKKS+KAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGER M Q++FPWP+PSKPMFFLM++GVEEISSSGTSYLNRTEA  VEKCVTRFL+ G+ P+QIGV
Sbjct:  620 GELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQVLIDEATQAMEAECLIPIVMGAKQLVLVGDHCQLGPVVLCKKSSKAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERVMDQVDFPWPVPSKPMFFLMTTGVEEISSSGTSYLNRTEATAVEKCVTRFLQKGVTPDQIGV 829          
BLAST of mRNA_C-tenellus_contig11588.1.2 vs. uniprot
Match: A0A6H5L258_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L258_9PHAE)

HSP 1 Score: 369 bits (946), Expect = 3.040e-118
Identity = 189/249 (75.90%), Postives = 201/249 (80.72%), Query Frame = 0
Query:    1 GELVAADEKRFRHLRSLAEKEILQAADVICTTCVGAGDPRLCNLNLRFRQ---------------------------------------VLIDEATQAMEAECLIPIVLGAKQLVLVGDHCQLGPVVLCKKSAKAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERTMSQIEFPWPMPSKPMFFLMSSGVEEISSSGTSYLNRTEAAVVEKCVTRFLKNGLIPEQIGV 210
            GELVAADEKRFR LRS AE+EILQAADVICTTCVGAGDPRL N+NLRFRQ                                       VLIDEATQAMEAECLIPIV+GAKQLVLVGDHCQLGPVVLCKKS+KAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGER M Q++FPWP+PSKPMFFLM++GVEEISSSGTSYLNRTEA  VEKCVTRFL+ G+ P+QIGV
Sbjct:  631 GELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQASSMPLLIHLADTVCGTRPKACLNKYEQVSSFTNVEWDAVLIDEATQAMEAECLIPIVMGAKQLVLVGDHCQLGPVVLCKKSSKAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERVMDQVDFPWPVPSKPMFFLMTTGVEEISSSGTSYLNRTEATAVEKCVTRFLQKGVTPDQIGV 879          
BLAST of mRNA_C-tenellus_contig11588.1.2 vs. uniprot
Match: A0A7S3XS25_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS25_HETAK)

HSP 1 Score: 326 bits (836), Expect = 1.690e-108
Identity = 160/210 (76.19%), Postives = 180/210 (85.71%), Query Frame = 0
Query:    1 GELVAADEKRFRHLRSLAEKEILQAADVICTTCVGAGDPRLCNLNLRFRQVLIDEATQAMEAECLIPIVLGAKQLVLVGDHCQLGPVVLCKKSAKAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERTMSQIEFPWPMPSKPMFFLMSSGVEEISSSGTSYLNRTEAAVVEKCVTRFLKNGLIPEQIGV 210
            GEL AAD ++ R LR  AE+E+LQAADVICTTCVGAGDPRL N   RFRQVLIDEATQAMEAECLIP VLGAKQLVLVGDHCQLGPV++CKK+A+AGLTQSLFERLV LG RP+RLQVQYRMHPCLSE+PSNMFYEG+LQNGV   +R + +++FPWP P KPMFF  + GVEEIS SGTSYLNRTEA+ VEK VTR LK G  P+Q+GV
Sbjct:  110 GELSAADARKLRQLRGRAERELLQAADVICTTCVGAGDPRLANF--RFRQVLIDEATQAMEAECLIPAVLGAKQLVLVGDHCQLGPVIMCKKAARAGLTQSLFERLVRLGFRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVGAADRRLPRLDFPWPEPDKPMFFQNAQGVEEISGSGTSYLNRTEASAVEKIVTRLLKEGARPDQVGV 317          
BLAST of mRNA_C-tenellus_contig11588.1.2 vs. uniprot
Match: A0A482SZ26_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SZ26_9ARCH)

HSP 1 Score: 320 bits (821), Expect = 5.050e-105
Identity = 160/210 (76.19%), Postives = 178/210 (84.76%), Query Frame = 0
Query:    1 GELVAADEKRFRHLRSLAEKEILQAADVICTTCVGAGDPRLCNLNLRFRQVLIDEATQAMEAECLIPIVLGAKQLVLVGDHCQLGPVVLCKKSAKAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERTMSQIEFPWPMPSKPMFFLMSSGVEEISSSGTSYLNRTEAAVVEKCVTRFLKNGLIPEQIGV 210
            GEL A D +RFR LRS AE+EIL AADVIC+TCVGAGDPRL NL  RFRQ+LIDE+TQAMEAEC IPIVLG KQLVLVGDHCQLGPVV+CKK+AKAGLTQSLFERLVLLGIRP+RLQVQYRMHP LSE+PSNMFYEGTLQNGV E +R +   EF WP P++PM+F MS+G EE+  SGTS+LNRTEAA VEK VT  LK    P+QIGV
Sbjct:   79 GELTAVDARRFRQLRSKAEREILMAADVICSTCVGAGDPRLANL--RFRQLLIDESTQAMEAECFIPIVLGVKQLVLVGDHCQLGPVVMCKKAAKAGLTQSLFERLVLLGIRPIRLQVQYRMHPVLSEFPSNMFYEGTLQNGVAETDRQLKSAEFLWPNPNRPMYFYMSTGNEEVGGSGTSFLNRTEAAAVEKIVTMMLKANFRPDQIGV 286          
BLAST of mRNA_C-tenellus_contig11588.1.2 vs. uniprot
Match: A0A1S3XEX5_TOBAC (regulator of nonsense transcripts 1 homolog n=3 Tax=Pentapetalae TaxID=1437201 RepID=A0A1S3XEX5_TOBAC)

HSP 1 Score: 312 bits (800), Expect = 1.130e-104
Identity = 151/210 (71.90%), Postives = 179/210 (85.24%), Query Frame = 0
Query:    1 GELVAADEKRFRHLRSLAEKEILQAADVICTTCVGAGDPRLCNLNLRFRQVLIDEATQAMEAECLIPIVLGAKQLVLVGDHCQLGPVVLCKKSAKAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERTMSQIEFPWPMPSKPMFFLMSSGVEEISSSGTSYLNRTEAAVVEKCVTRFLKNGLIPEQIGV 210
            GEL ++DEK+++ L+   E+EI Q+ADVIC TCVGAGDPRL N   RFRQVLIDE+TQA E ECLIP+VLGAKQ VLVGDHCQLGPV++CKK+A+AGL QSLFERLV LG++P+RLQVQYRMHP LSE+PSN FYEGTLQNGVT  ER  + I+FPWP+P++PMFF +  G EEIS+SGTSYLNRTEAA VEK VT FLK+G++P QIGV
Sbjct:   32 GELSSSDEKKYKALKRATEREIAQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVFLGVKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGV 239          
BLAST of mRNA_C-tenellus_contig11588.1.2 vs. uniprot
Match: A0A453BG96_AEGTS (Helicase ATP-binding domain-containing protein n=7 Tax=Poaceae TaxID=4479 RepID=A0A453BG96_AEGTS)

HSP 1 Score: 318 bits (816), Expect = 7.710e-103
Identity = 153/210 (72.86%), Postives = 182/210 (86.67%), Query Frame = 0
Query:    1 GELVAADEKRFRHLRSLAEKEILQAADVICTTCVGAGDPRLCNLNLRFRQVLIDEATQAMEAECLIPIVLGAKQLVLVGDHCQLGPVVLCKKSAKAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERTMSQIEFPWPMPSKPMFFLMSSGVEEISSSGTSYLNRTEAAVVEKCVTRFLKNGLIPEQIGV 210
            GEL ++DEK+++ L+   E+EILQ+ADVIC TCVGAGDPRL N   RFRQVLIDE+TQA E ECLIP+VLG KQ+VLVGDHCQLGPV++CKK+A+AGL QSLFERLV+LG++P RLQVQYRMHPCLSE+PSN FYEGTLQNGVT  ER  S I+FPWP+P++PMFF +  GVEEIS+SGTSYLNRTEAA VEK VT FL++G++P QIGV
Sbjct:  365 GELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNF--RFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGVEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 572          
BLAST of mRNA_C-tenellus_contig11588.1.2 vs. uniprot
Match: A0A453BGB6_AEGTS (Helicase ATP-binding domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453BGB6_AEGTS)

HSP 1 Score: 318 bits (816), Expect = 2.470e-102
Identity = 153/210 (72.86%), Postives = 182/210 (86.67%), Query Frame = 0
Query:    1 GELVAADEKRFRHLRSLAEKEILQAADVICTTCVGAGDPRLCNLNLRFRQVLIDEATQAMEAECLIPIVLGAKQLVLVGDHCQLGPVVLCKKSAKAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERTMSQIEFPWPMPSKPMFFLMSSGVEEISSSGTSYLNRTEAAVVEKCVTRFLKNGLIPEQIGV 210
            GEL ++DEK+++ L+   E+EILQ+ADVIC TCVGAGDPRL N   RFRQVLIDE+TQA E ECLIP+VLG KQ+VLVGDHCQLGPV++CKK+A+AGL QSLFERLV+LG++P RLQVQYRMHPCLSE+PSN FYEGTLQNGVT  ER  S I+FPWP+P++PMFF +  GVEEIS+SGTSYLNRTEAA VEK VT FL++G++P QIGV
Sbjct:  365 GELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNF--RFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGVEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 572          
BLAST of mRNA_C-tenellus_contig11588.1.2 vs. uniprot
Match: A0A453BGE4_AEGTS (Helicase ATP-binding domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453BGE4_AEGTS)

HSP 1 Score: 318 bits (816), Expect = 4.430e-102
Identity = 153/210 (72.86%), Postives = 182/210 (86.67%), Query Frame = 0
Query:    1 GELVAADEKRFRHLRSLAEKEILQAADVICTTCVGAGDPRLCNLNLRFRQVLIDEATQAMEAECLIPIVLGAKQLVLVGDHCQLGPVVLCKKSAKAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERTMSQIEFPWPMPSKPMFFLMSSGVEEISSSGTSYLNRTEAAVVEKCVTRFLKNGLIPEQIGV 210
            GEL ++DEK+++ L+   E+EILQ+ADVIC TCVGAGDPRL N   RFRQVLIDE+TQA E ECLIP+VLG KQ+VLVGDHCQLGPV++CKK+A+AGL QSLFERLV+LG++P RLQVQYRMHPCLSE+PSN FYEGTLQNGVT  ER  S I+FPWP+P++PMFF +  GVEEIS+SGTSYLNRTEAA VEK VT FL++G++P QIGV
Sbjct:  235 GELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNF--RFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGVEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 442          
BLAST of mRNA_C-tenellus_contig11588.1.2 vs. uniprot
Match: A0A067DPW2_CITSI (Uncharacterized protein (Fragment) n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067DPW2_CITSI)

HSP 1 Score: 311 bits (797), Expect = 2.420e-101
Identity = 151/209 (72.25%), Postives = 180/209 (86.12%), Query Frame = 0
Query:    2 ELVAADEKRFRHLRSLAEKEILQAADVICTTCVGAGDPRLCNLNLRFRQVLIDEATQAMEAECLIPIVLGAKQLVLVGDHCQLGPVVLCKKSAKAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERTMSQIEFPWPMPSKPMFFLMSSGVEEISSSGTSYLNRTEAAVVEKCVTRFLKNGLIPEQIGV 210
            EL ++DEK+++ L+   E+EI Q+ADVIC TCVGAGDPRL N   RFRQVLIDE+TQA E ECLIP+VLGAKQ+VLVGDHCQLGPV++CKK+A+AGL QSLFERLVLLG++P+RLQVQYRMHP LSE+PSN FYEGTLQNGVT  ER  S I+FPWP+P++PMFF +  G EEIS+SGTSYLNRTEAA VEK VT FL++G++P QIGV
Sbjct:    1 ELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 207          
BLAST of mRNA_C-tenellus_contig11588.1.2 vs. uniprot
Match: A0A1D6EWH8_MAIZE (Regulator of nonsense transcripts 1-like protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6EWH8_MAIZE)

HSP 1 Score: 316 bits (810), Expect = 5.080e-101
Identity = 152/210 (72.38%), Postives = 181/210 (86.19%), Query Frame = 0
Query:    1 GELVAADEKRFRHLRSLAEKEILQAADVICTTCVGAGDPRLCNLNLRFRQVLIDEATQAMEAECLIPIVLGAKQLVLVGDHCQLGPVVLCKKSAKAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERTMSQIEFPWPMPSKPMFFLMSSGVEEISSSGTSYLNRTEAAVVEKCVTRFLKNGLIPEQIGV 210
            GEL ++DEK+++ L+   E+EILQ+ADVIC TCVGAGDPRL N   RFRQVLIDE+TQA E ECLIP+VLG KQ+VLVGDHCQLGPV++CKK+A+AGL QSLFERLV+LG++P RLQVQYRMHPCLSE+PSN FYEGTLQNGVT  ER  S I+FPWP+P++PMFF +  G EEIS+SGTSYLNRTEAA VEK VT FL++G++P QIGV
Sbjct:   79 GELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNF--RFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 286          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11588.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN00_ECTSI5.240e-12590.00RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5L258_9PHAE3.040e-11875.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XS25_HETAK1.690e-10876.19Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A482SZ26_9ARCH5.050e-10576.19Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A1S3XEX5_TOBAC1.130e-10471.90regulator of nonsense transcripts 1 homolog n=3 Ta... [more]
A0A453BG96_AEGTS7.710e-10372.86Helicase ATP-binding domain-containing protein n=7... [more]
A0A453BGB6_AEGTS2.470e-10272.86Helicase ATP-binding domain-containing protein n=1... [more]
A0A453BGE4_AEGTS4.430e-10272.86Helicase ATP-binding domain-containing protein n=1... [more]
A0A067DPW2_CITSI2.420e-10172.25Uncharacterized protein (Fragment) n=1 Tax=Citrus ... [more]
A0A1D6EWH8_MAIZE5.080e-10172.38Regulator of nonsense transcripts 1-like protein n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041677DNA2/NAM7 helicase, helicase domainPFAMPF13086AAA_11coord: 9..89
e-value: 1.9E-28
score: 100.0
NoneNo IPR availableGENE3D3.40.50.300coord: 120..210
e-value: 1.4E-22
score: 82.0
NoneNo IPR availableGENE3D3.40.50.300coord: 2..119
e-value: 2.5E-36
score: 127.5
NoneNo IPR availablePANTHERPTHR10887:SF486REGULATOR OF NONSENSE TRANSCRIPTS 1-LIKE PROTEINcoord: 1..210
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 1..210
IPR041679DNA2/NAM7 helicase-like, C-terminalPFAMPF13087AAA_12coord: 99..210
e-value: 3.4E-20
score: 72.5
IPR041679DNA2/NAM7 helicase-like, C-terminalCDDcd18808SF1_C_Upf1coord: 122..210
e-value: 2.28473E-26
score: 98.0751
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11588contigC-tenellus_contig11588:450..3786 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11588.1.2mRNA_C-tenellus_contig11588.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig11588 450..3786 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig11588.1.2 ID=prot_C-tenellus_contig11588.1.2|Name=mRNA_C-tenellus_contig11588.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=210bp
GELVAADEKRFRHLRSLAEKEILQAADVICTTCVGAGDPRLCNLNLRFRQ
VLIDEATQAMEAECLIPIVLGAKQLVLVGDHCQLGPVVLCKKSAKAGLTQ
SLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERTM
SQIEFPWPMPSKPMFFLMSSGVEEISSSGTSYLNRTEAAVVEKCVTRFLK
NGLIPEQIGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041677DNA2/NAM7_AAA_11
IPR041679DNA2/NAM7-like_C
IPR027417P-loop_NTPase