prot_C-tenellus_contig1096.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig1096.1.1
Unique Nameprot_C-tenellus_contig1096.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length177
Homology
BLAST of mRNA_C-tenellus_contig1096.1.1 vs. uniprot
Match: D7G6E6_ECTSI (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E6_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 9.480e-83
Identity = 127/160 (79.38%), Postives = 144/160 (90.00%), Query Frame = 0
Query:   17 QHNLLGMAAVAQLEKDPKFAAVYQLLHIFSVEKLDAYMAFHKQHGVTLAENKIDHDSCVSSMRLLSLCSLATEHEEIPYQIVAETLQLEGDEEVEEWVLRCIQTGLMEAKMDQMQRVVVISRCTNRVFGPEQWKTLQKKLKAWSSNVNQLLTAITKSNER 176
            QHNLLGMAAV QL+ DPK++AV++LLHIFSVEKL  YMAFH+++  TLA+NKIDHDSCVSSMRLLSLCSLATEHEEIPYQ+VA+TLQ+ GD+EVE+WVL+ IQTGLMEAKMDQMQRVVVI RCTNRVFGP QWKTLQ KL  WS+NV  LL+AI KSNER
Sbjct:  237 QHNLLGMAAVTQLKADPKYSAVHELLHIFSVEKLGEYMAFHEKNAKTLADNKIDHDSCVSSMRLLSLCSLATEHEEIPYQVVADTLQVSGDDEVEDWVLQAIQTGLMEAKMDQMQRVVVIRRCTNRVFGPAQWKTLQMKLGTWSANVQTLLSAIQKSNER 396          
BLAST of mRNA_C-tenellus_contig1096.1.1 vs. uniprot
Match: A0A835Z3J7_9STRA (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J7_9STRA)

HSP 1 Score: 186 bits (472), Expect = 3.540e-54
Identity = 91/158 (57.59%), Postives = 121/158 (76.58%), Query Frame = 0
Query:   18 HNLLGMAAVAQLEKDPKFAAVYQLLHIFSVEKLDAYMAFHKQHGVTLAENKIDHDSCVSSMRLLSLCSLATEHEEIPYQIVAETLQLEGDEEVEEWVLRCIQTGLMEAKMDQMQRVVVISRCTNRVFGPEQWKTLQKKLKAWSSNVNQLLTAITKSNE 175
            HNLLGM+AV +L  DP++A VY+LL IF  EKL+ Y+AF K +   L ++ I HD CV +MRLLSLCSL +E +E+PY +++ETLQ++  E+VEEWVL+  Q GLMEA+MDQ+++VV+ISRCT RVFG EQW +LQ KL  W +NV+ LL  I +SNE
Sbjct:  240 HNLLGMSAVQELRNDPEYAQVYELLRIFGEEKLETYLAFAKANQALLEKHGISHDECVGNMRLLSLCSLGSEAQEVPYSVISETLQVDP-EDVEEWVLQATQAGLMEARMDQLEKVVLISRCTCRVFGKEQWLSLQAKLGQWKANVSGLLQTIQRSNE 396          
BLAST of mRNA_C-tenellus_contig1096.1.1 vs. uniprot
Match: A0A7S2CTT4_9STRA (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTT4_9STRA)

HSP 1 Score: 161 bits (408), Expect = 4.890e-45
Identity = 81/157 (51.59%), Postives = 111/157 (70.70%), Query Frame = 0
Query:   17 QHNLLGMAAVAQLEKDPKFAAVYQLLHIFSVEKLDAYMAFHKQHGVTLAENKIDHDSCVSSMRLLSLCSLATEHEEIPYQIVAETLQLEGDEEVEEWVLRCIQTGLMEAKMDQMQRVVVISRCTNRVFGPEQWKTLQKKLKAWSSNVNQLLTAITKS 173
            +HNLLGM A+ QLE D ++  +Y+LL IFSV KL  Y+ F++    T+    ++H+ C+++MRLLSLCSLATEHEEIPY  +AETL++   EEVE WV+      LM+AKMDQ+Q+VV+ISRCT+RVF   QWK L ++L  W  NV  +L  I ++
Sbjct:  223 RHNLLGMTAMQQLENDAEYGKLYELLRIFSVGKLREYLNFYEAEKGTMERYGLEHEECIANMRLLSLCSLATEHEEIPYAAIAETLEVPL-EEVEYWVVATTTAKLMDAKMDQLQQVVMISRCTHRVFEHSQWKQLAERLTTWKINVRNILETIQRT 378          
BLAST of mRNA_C-tenellus_contig1096.1.1 vs. uniprot
Match: A0A251SAQ5_HELAN (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SAQ5_HELAN)

HSP 1 Score: 155 bits (391), Expect = 2.580e-42
Identity = 78/171 (45.61%), Postives = 113/171 (66.08%), Query Frame = 0
Query:    1 ERQHLNIFFHSLLSVLQHNLLGMAAVAQLEKDPKFAAVYQLLHIFSVEKLDAYMAFHKQHGVTLAENKIDHDSCVSSMRLLSLCSLAT-EHEEIPYQIVAETLQLEGDEEVEEWVLRCIQTGLMEAKMDQMQRVVVISRCTNRVFGPEQWKTLQKKLKAWSSNVNQLLTAI 170
            E  H  + F     + QH+LL M AVAQLEKD K+A VYQLL IF  ++LDAY+ FH  +   L    + H+ C++ MRL+S+  LA+ E  +I Y ++ +TLQ+E D+EVE WV++ I + L++ K+DQM +V+ +SRCT RVFGP QW  L++KL  W  N+  ++T I
Sbjct:  222 EAAHTIVEFVKAPDMFQHDLLEMPAVAQLEKDTKYALVYQLLKIFQTQRLDAYLEFHTTNSELLKSYGLVHEECIAKMRLMSIVDLASNESGQISYSLIKDTLQIE-DDEVEPWVVKAITSKLIDCKIDQMNQVIRVSRCTERVFGPRQWLALREKLATWRGNIANVITTI 391          
BLAST of mRNA_C-tenellus_contig1096.1.1 vs. uniprot
Match: A0A5N6Q3M5_9ASTR (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6Q3M5_9ASTR)

HSP 1 Score: 152 bits (384), Expect = 3.110e-41
Identity = 76/171 (44.44%), Postives = 112/171 (65.50%), Query Frame = 0
Query:    1 ERQHLNIFFHSLLSVLQHNLLGMAAVAQLEKDPKFAAVYQLLHIFSVEKLDAYMAFHKQHGVTLAENKIDHDSCVSSMRLLSLCSLATEHE-EIPYQIVAETLQLEGDEEVEEWVLRCIQTGLMEAKMDQMQRVVVISRCTNRVFGPEQWKTLQKKLKAWSSNVNQLLTAI 170
            E  H  I F       QH+LL M AVAQLEKD K+A +YQLL IF  ++LDAY+ FH  +   L    + H+ C++ MRL+S+  LA+    +IP+ ++ +TL++E DE VE WV++ I + L++ K+DQM +V+ +SRCT RVFGP QW+ L++KL  W  N+  ++T I
Sbjct:  227 EAAHTIIEFVKAPDSFQHDLLEMPAVAQLEKDTKYALLYQLLKIFQTQRLDAYLDFHATNSALLKSYGLVHEECIAKMRLMSIVDLASNGSGQIPFSLIKDTLKIEEDE-VEPWVVKAITSKLIDCKIDQMNQVIRVSRCTERVFGPHQWQALREKLATWRGNIANVITTI 396          
BLAST of mRNA_C-tenellus_contig1096.1.1 vs. uniprot
Match: A0A7J6FZF8_CANSA (Eukaryotic translation initiation factor 3 subunit M n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6FZF8_CANSA)

HSP 1 Score: 149 bits (376), Expect = 4.160e-40
Identity = 73/157 (46.50%), Postives = 106/157 (67.52%), Query Frame = 0
Query:   15 VLQHNLLGMAAVAQLEKDPKFAAVYQLLHIFSVEKLDAYMAFHKQHGVTLAENKIDHDSCVSSMRLLSLCSLATEHE-EIPYQIVAETLQLEGDEEVEEWVLRCIQTGLMEAKMDQMQRVVVISRCTNRVFGPEQWKTLQKKLKAWSSNVNQLLTAI 170
            + Q +LL M AV QLEKD K+A VYQLL IF   +LDAY+ F   +   L    + H+ C++ MRL+SL  L ++   +IPY ++ +TL++  D+EVE WV++ I   LM+ KMDQM +VV++SRCT+R+FG +QW+TL+ KL  W  NV  ++T I
Sbjct:  236 MFQCDLLDMPAVGQLEKDAKYALVYQLLKIFLTRRLDAYLEFQAANSTLLKSYGLVHEDCITKMRLISLADLGSDESGQIPYSLIKDTLRI-NDDEVELWVVKAIAAKLMDCKMDQMNQVVIVSRCTDRIFGQDQWQTLKTKLATWRGNVANVITTI 391          
BLAST of mRNA_C-tenellus_contig1096.1.1 vs. uniprot
Match: A0A7N2RF70_QUELO (Eukaryotic translation initiation factor 3 subunit M n=7 Tax=Fagaceae TaxID=3503 RepID=A0A7N2RF70_QUELO)

HSP 1 Score: 149 bits (376), Expect = 4.160e-40
Identity = 72/157 (45.86%), Postives = 108/157 (68.79%), Query Frame = 0
Query:   15 VLQHNLLGMAAVAQLEKDPKFAAVYQLLHIFSVEKLDAYMAFHKQHGVTLAENKIDHDSCVSSMRLLSLCSLATEHE-EIPYQIVAETLQLEGDEEVEEWVLRCIQTGLMEAKMDQMQRVVVISRCTNRVFGPEQWKTLQKKLKAWSSNVNQLLTAI 170
            + Q +LL M AV QLEKD K+A+VYQLL IF  ++LDAY+ F   +  +L    + H+ C++ MRL+SL  LA++   +IPY ++ +TL++  D+EVE WV++ I   L++ KMDQM +VV++SRCT RVFG  QW+TL+ KL  W  N+  +++ I
Sbjct:  236 MFQCDLLDMPAVGQLEKDAKYASVYQLLKIFLTQRLDAYLEFQAANSTSLKSYGLVHEDCITKMRLMSLVDLASDESGQIPYALIRDTLRI-NDDEVELWVVKAISAKLIDCKMDQMNQVVIVSRCTERVFGQNQWQTLKSKLSTWRGNIASVISTI 391          
BLAST of mRNA_C-tenellus_contig1096.1.1 vs. uniprot
Match: A0A5J5AHA4_9ASTE (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Nyssaceae TaxID=4289 RepID=A0A5J5AHA4_9ASTE)

HSP 1 Score: 149 bits (375), Expect = 5.840e-40
Identity = 76/165 (46.06%), Postives = 107/165 (64.85%), Query Frame = 0
Query:    7 IFFHSLLSVLQHNLLGMAAVAQLEKDPKFAAVYQLLHIFSVEKLDAYMAFHKQHGVTLAENKIDHDSCVSSMRLLSLCSLAT-EHEEIPYQIVAETLQLEGDEEVEEWVLRCIQTGLMEAKMDQMQRVVVISRCTNRVFGPEQWKTLQKKLKAWSSNVNQLLTAI 170
            I F  +  + Q +LL M AVAQLEKD K+A VYQLL+IF  ++LDAY  FH  +   L    + H+ C+  MRL+SL  L + E  +IPY ++ +TLQ+  D+EVE WV++ I   LM+ KMDQM ++V++SRCT RVFG  QW+ L+ KL  W  N+  ++  I
Sbjct:  228 IEFVKVPDIFQCDLLDMPAVAQLEKDAKYALVYQLLNIFLTQRLDAYFDFHAANSTLLKSYGLVHEDCIVKMRLMSLVDLGSAESGQIPYALIKDTLQI-NDDEVELWVVKAITAKLMDCKMDQMNQIVIVSRCTERVFGQHQWQALRAKLAIWRGNIANVIGTI 391          
BLAST of mRNA_C-tenellus_contig1096.1.1 vs. uniprot
Match: A0A5D2NYP3_GOSTO (PCI domain-containing protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A5D2NYP3_GOSTO)

HSP 1 Score: 145 bits (365), Expect = 6.570e-40
Identity = 72/157 (45.86%), Postives = 104/157 (66.24%), Query Frame = 0
Query:   15 VLQHNLLGMAAVAQLEKDPKFAAVYQLLHIFSVEKLDAYMAFHKQHGVTLAENKIDHDSCVSSMRLLSLCSLA-TEHEEIPYQIVAETLQLEGDEEVEEWVLRCIQTGLMEAKMDQMQRVVVISRCTNRVFGPEQWKTLQKKLKAWSSNVNQLLTAI 170
            + Q +LL + AVAQLEKD K+A VYQLL IF  +KLDAY+ F   +   +    + H+ C++ MRL+SL  L   E  +IPY ++ +TL++  D+EVE WV++ I   LM+ KMDQM +VV++SRC+  +FGP QW +L+ KL  W  NV  L++ I
Sbjct:   89 MFQCDLLDIPAVAQLEKDSKYALVYQLLKIFLTQKLDAYLEFQAANSTLMKSYGLVHEDCITKMRLISLVDLGLNESGQIPYALIKDTLRI-NDDEVELWVVKAITAKLMDCKMDQMNQVVIVSRCSEHIFGPHQWLSLRSKLATWRGNVASLISTI 244          
BLAST of mRNA_C-tenellus_contig1096.1.1 vs. uniprot
Match: UPI001CC61758 (eukaryotic translation initiation factor 3 subunit M-like n=2 Tax=Proteaceae TaxID=4328 RepID=UPI001CC61758)

HSP 1 Score: 148 bits (373), Expect = 1.130e-39
Identity = 69/156 (44.23%), Postives = 103/156 (66.03%), Query Frame = 0
Query:   15 VLQHNLLGMAAVAQLEKDPKFAAVYQLLHIFSVEKLDAYMAFHKQHGVTLAENKIDHDSCVSSMRLLSLCSLATEHEEIPYQIVAETLQLEGDEEVEEWVLRCIQTGLMEAKMDQMQRVVVISRCTNRVFGPEQWKTLQKKLKAWSSNVNQLLTAI 170
            + Q +LL M AV QLEKD K++ VYQLL IF   +LDAY+ FH  +   L    + H+ C++ MRL++L  L + H EIPY ++ +TL++  D+EVE WV++ I   L++ KMDQM +VV+++RCT RVFG  QW  L+ KL +W  N+  ++  +
Sbjct:  236 MFQSDLLDMPAVGQLEKDGKYSLVYQLLKIFLTHRLDAYLDFHAANSTLLKSYGLVHEDCIAKMRLMTLADLGSNHGEIPYDLIKDTLRV-NDDEVELWVVKAITVKLLDCKMDQMNQVVIVNRCTERVFGLHQWLALRSKLTSWRGNIANVINTV 390          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1096.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6E6_ECTSI9.480e-8379.38Eukaryotic translation initiation factor 3 subunit... [more]
A0A835Z3J7_9STRA3.540e-5457.59Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2CTT4_9STRA4.890e-4551.59Eukaryotic translation initiation factor 3 subunit... [more]
A0A251SAQ5_HELAN2.580e-4245.61Eukaryotic translation initiation factor 3 subunit... [more]
A0A5N6Q3M5_9ASTR3.110e-4144.44Eukaryotic translation initiation factor 3 subunit... [more]
A0A7J6FZF8_CANSA4.160e-4046.50Eukaryotic translation initiation factor 3 subunit... [more]
A0A7N2RF70_QUELO4.160e-4045.86Eukaryotic translation initiation factor 3 subunit... [more]
A0A5J5AHA4_9ASTE5.840e-4046.06Eukaryotic translation initiation factor 3 subunit... [more]
A0A5D2NYP3_GOSTO6.570e-4045.86PCI domain-containing protein n=2 Tax=Gossypium Ta... [more]
UPI001CC617581.130e-3944.23eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000717Proteasome component (PCI) domainSMARTSM00088PINT_4coord: 69..159
e-value: 1.4E-22
score: 91.0
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 37..137
e-value: 1.3E-13
score: 51.3
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 1..141
score: 19.04
NoneNo IPR availableSMARTSM00753PINTcoord: 69..159
e-value: 1.4E-22
score: 91.0
NoneNo IPR availablePANTHERPTHR15350:SF2EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Mcoord: 15..174
NoneNo IPR availablePANTHERPTHR15350COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17coord: 15..174
IPR040750eIF3 subunit M, C-terminal helix domainPFAMPF18005eIF3m_C_helixcoord: 142..170
e-value: 1.1E-10
score: 41.0
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 74..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1096contigC-tenellus_contig1096:378..1955 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1096.1.1mRNA_C-tenellus_contig1096.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig1096 378..1955 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig1096.1.1 ID=prot_C-tenellus_contig1096.1.1|Name=mRNA_C-tenellus_contig1096.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=177bp
ERQHLNIFFHSLLSVLQHNLLGMAAVAQLEKDPKFAAVYQLLHIFSVEKL
DAYMAFHKQHGVTLAENKIDHDSCVSSMRLLSLCSLATEHEEIPYQIVAE
TLQLEGDEEVEEWVLRCIQTGLMEAKMDQMQRVVVISRCTNRVFGPEQWK
TLQKKLKAWSSNVNQLLTAITKSNER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
IPR040750eIF3m_C_helix
IPR036390WH_DNA-bd_sf