prot_C-tenellus_contig10951.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10951.1.1
Unique Nameprot_C-tenellus_contig10951.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length71
Homology
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A4V1U713_9BURK (ABC transporter ATP-binding protein/permease n=2 Tax=Comamonadaceae TaxID=80864 RepID=A0A4V1U713_9BURK)

HSP 1 Score: 91.3 bits (225), Expect = 7.560e-20
Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 0
Query:    3 KGLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 71
            +GLT HTP    ++ QDLS  +A G+++LITGPSGCGKSSLLRA+AGLW TG+GT+Q P    + F+PQ
Sbjct:  374 EGLTLHTPQFGRLLVQDLSLKLAAGDALLITGPSGCGKSSLLRAMAGLWRTGQGTVQHPPLDDMFFLPQ 442          
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A497V1U8_9BURK (Putative ATP-binding cassette transporter n=5 Tax=Acidovorax TaxID=12916 RepID=A0A497V1U8_9BURK)

HSP 1 Score: 89.4 bits (220), Expect = 3.660e-19
Identity = 40/69 (57.97%), Postives = 53/69 (76.81%), Query Frame = 0
Query:    3 KGLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 71
            +GLT HTP    ++ QDLS ++A  +++LITGPSGCGKSSLLRA+AGLW TG+GT+Q P    + F+PQ
Sbjct:  463 EGLTLHTPQFGRLLVQDLSLTLAAADALLITGPSGCGKSSLLRAMAGLWRTGQGTVQHPPLQDMFFLPQ 531          
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A4Q6GNC3_9GAMM (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A4Q6GNC3_9GAMM)

HSP 1 Score: 86.7 bits (213), Expect = 1.070e-18
Identity = 39/69 (56.52%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    3 KGLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 71
            + LT H P  + V+ ++LS ++A G+++LITG SGCGKSSLLRA+AGLW TG G IQRP   Q  F+PQ
Sbjct:   88 QALTLHPPQSERVLIKELSLALAPGDALLITGESGCGKSSLLRAIAGLWHTGSGVIQRPALDQFFFLPQ 156          
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: UPI0019121F9E (ABC transporter ATP-binding protein/permease n=1 Tax=Rhodocyclus purpureus TaxID=1067 RepID=UPI0019121F9E)

HSP 1 Score: 87.4 bits (215), Expect = 1.710e-18
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    3 KGLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 71
            +GL+ HTPD   V+ +DLS +V  GE +LI G SGCGKSSLLRA+AGLW  G GT+ RP    ++F+PQ
Sbjct:  357 RGLSLHTPDGGRVLVRDLSITVKTGEGLLIVGESGCGKSSLLRAIAGLWYAGSGTVFRPPPEDILFLPQ 425          
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A0Q4Y5A0_9BURK (ABC transporter ATP-binding protein n=2 Tax=Pseudorhodoferax sp. Leaf267 TaxID=1736316 RepID=A0A0Q4Y5A0_9BURK)

HSP 1 Score: 87.0 bits (214), Expect = 2.320e-18
Identity = 37/71 (52.11%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    1 GSKGLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 71
            G++GLT +TP  ++++ + LSF++A G+++LITGPSGCGKSSLLRA+AGLW  G G++  P   ++ F+PQ
Sbjct:  348 GAQGLTLYTPRAEQMLIERLSFTLAPGDALLITGPSGCGKSSLLRALAGLWHNGSGSVSHPPRGEMFFLPQ 418          
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A846E629_9CYAN (ABC transporter ATP-binding protein/permease n=1 Tax=Desertifilum sp. SIO1I2 TaxID=2607799 RepID=A0A846E629_9CYAN)

HSP 1 Score: 85.9 bits (211), Expect = 3.060e-18
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 0
Query:    5 LTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 71
            L   TP+ +  +  DLS  +  GES+L+ GPSGCGKSSLLRA+AGLW +G GTI RP   QV+F+PQ
Sbjct:  137 LNLQTPNHQRTLIADLSVELPPGESLLVMGPSGCGKSSLLRAIAGLWDSGTGTIHRPASEQVLFLPQ 203          
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A6I5NLA4_9CYAN (ABC transporter ATP-binding protein/permease n=1 Tax=Leptolyngbya sp. SIOISBB TaxID=2607771 RepID=A0A6I5NLA4_9CYAN)

HSP 1 Score: 86.7 bits (213), Expect = 3.220e-18
Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 0
Query:    5 LTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 71
            LT  TP+ +  + +DL+  +A   S+L+ GPSGCGKSSLLRA+AGLW TGKG IQRP   Q++F+PQ
Sbjct:  398 LTLQTPNYQRTLIEDLTLELATDSSLLVAGPSGCGKSSLLRAIAGLWNTGKGLIQRPTMQQMLFLPQ 464          
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A520GFL5_9BURK (ABC transporter ATP-binding protein/permease (Fragment) n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520GFL5_9BURK)

HSP 1 Score: 86.3 bits (212), Expect = 3.790e-18
Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    5 LTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 71
            LT +TP    ++ +DLS S+A G+ +LITGPSGCGKSSLLRA+AGLW TG GT++ P   +V F+PQ
Sbjct:  247 LTLYTPRFGRLLVRDLSLSLAPGDGLLITGPSGCGKSSLLRALAGLWRTGSGTVRHPPPQEVFFLPQ 313          
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A7S2UTV1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UTV1_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.220e-18
Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    3 KGLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 71
            + LT  TPD   V+ +D+ F++ KGE++LI G SG GKSSLLRA+AGLWT G G+I RP + +V F+PQ
Sbjct:   87 RNLTVKTPDGNRVLLRDVDFNLNKGENLLIVGDSGVGKSSLLRAIAGLWTCGGGSIARPRNDEVYFLPQ 155          
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: UPI001FE71013 (ATP-binding cassette domain-containing protein n=1 Tax=Chamaesiphon polymorphus TaxID=2107691 RepID=UPI001FE71013)

HSP 1 Score: 84.3 bits (207), Expect = 5.760e-18
Identity = 36/68 (52.94%), Postives = 52/68 (76.47%), Query Frame = 0
Query:    4 GLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 71
            GLT +TP+ ++ + ++LSF +   +S+L+ G SGCGKSSLLRA+AGLW  GKGTI+ P  T+ +F+PQ
Sbjct:   79 GLTLNTPNAEQTLFENLSFELTPAQSLLVVGSSGCGKSSLLRAIAGLWCNGKGTIESPDYTEALFLPQ 146          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4V1U713_9BURK7.560e-2059.42ABC transporter ATP-binding protein/permease n=2 T... [more]
A0A497V1U8_9BURK3.660e-1957.97Putative ATP-binding cassette transporter n=5 Tax=... [more]
A0A4Q6GNC3_9GAMM1.070e-1856.52ATP-binding cassette domain-containing protein (Fr... [more]
UPI0019121F9E1.710e-1856.52ABC transporter ATP-binding protein/permease n=1 T... [more]
A0A0Q4Y5A0_9BURK2.320e-1852.11ABC transporter ATP-binding protein n=2 Tax=Pseudo... [more]
A0A846E629_9CYAN3.060e-1856.72ABC transporter ATP-binding protein/permease n=1 T... [more]
A0A6I5NLA4_9CYAN3.220e-1856.72ABC transporter ATP-binding protein/permease n=1 T... [more]
A0A520GFL5_9BURK3.790e-1858.21ABC transporter ATP-binding protein/permease (Frag... [more]
A0A7S2UTV1_9STRA4.220e-1855.07Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
UPI001FE710135.760e-1852.94ATP-binding cassette domain-containing protein n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 18..59
e-value: 1.1E-10
score: 42.1
NoneNo IPR availableGENE3D3.40.50.300coord: 2..71
e-value: 3.1E-16
score: 61.8
NoneNo IPR availablePANTHERPTHR11384ATP-BINDING CASSETTE, SUB-FAMILY D MEMBERcoord: 3..71
NoneNo IPR availablePANTHERPTHR11384:SF55ATP-BINDING CASSETTE TRANSPORTER, SUBFAMILY D, MEMBER 9, SMABCD9coord: 3..71
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10951contigC-tenellus_contig10951:146..703 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10951.1.1mRNA_C-tenellus_contig10951.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10951 146..703 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10951.1.1 ID=prot_C-tenellus_contig10951.1.1|Name=mRNA_C-tenellus_contig10951.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=71bp
GSKGLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGL
WTTGKGTIQRPVDTQVMFVPQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase