mRNA_C-tenellus_contig10951.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A4V1U713_9BURK (ABC transporter ATP-binding protein/permease n=2 Tax=Comamonadaceae TaxID=80864 RepID=A0A4V1U713_9BURK) HSP 1 Score: 91.3 bits (225), Expect = 7.560e-20 Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 1 Query: 7 KGLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 213 +GLT HTP ++ QDLS +A G+++LITGPSGCGKSSLLRA+AGLW TG+GT+Q P + F+PQ Sbjct: 374 EGLTLHTPQFGRLLVQDLSLKLAAGDALLITGPSGCGKSSLLRAMAGLWRTGQGTVQHPPLDDMFFLPQ 442
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A497V1U8_9BURK (Putative ATP-binding cassette transporter n=5 Tax=Acidovorax TaxID=12916 RepID=A0A497V1U8_9BURK) HSP 1 Score: 89.4 bits (220), Expect = 3.660e-19 Identity = 40/69 (57.97%), Postives = 53/69 (76.81%), Query Frame = 1 Query: 7 KGLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 213 +GLT HTP ++ QDLS ++A +++LITGPSGCGKSSLLRA+AGLW TG+GT+Q P + F+PQ Sbjct: 463 EGLTLHTPQFGRLLVQDLSLTLAAADALLITGPSGCGKSSLLRAMAGLWRTGQGTVQHPPLQDMFFLPQ 531
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A4Q6GNC3_9GAMM (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A4Q6GNC3_9GAMM) HSP 1 Score: 86.7 bits (213), Expect = 1.070e-18 Identity = 39/69 (56.52%), Postives = 51/69 (73.91%), Query Frame = 1 Query: 7 KGLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 213 + LT H P + V+ ++LS ++A G+++LITG SGCGKSSLLRA+AGLW TG G IQRP Q F+PQ Sbjct: 88 QALTLHPPQSERVLIKELSLALAPGDALLITGESGCGKSSLLRAIAGLWHTGSGVIQRPALDQFFFLPQ 156
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: UPI0019121F9E (ABC transporter ATP-binding protein/permease n=1 Tax=Rhodocyclus purpureus TaxID=1067 RepID=UPI0019121F9E) HSP 1 Score: 87.4 bits (215), Expect = 1.710e-18 Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 1 Query: 7 KGLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 213 +GL+ HTPD V+ +DLS +V GE +LI G SGCGKSSLLRA+AGLW G GT+ RP ++F+PQ Sbjct: 357 RGLSLHTPDGGRVLVRDLSITVKTGEGLLIVGESGCGKSSLLRAIAGLWYAGSGTVFRPPPEDILFLPQ 425
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A0Q4Y5A0_9BURK (ABC transporter ATP-binding protein n=2 Tax=Pseudorhodoferax sp. Leaf267 TaxID=1736316 RepID=A0A0Q4Y5A0_9BURK) HSP 1 Score: 87.0 bits (214), Expect = 2.320e-18 Identity = 37/71 (52.11%), Postives = 56/71 (78.87%), Query Frame = 1 Query: 1 GSKGLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 213 G++GLT +TP ++++ + LSF++A G+++LITGPSGCGKSSLLRA+AGLW G G++ P ++ F+PQ Sbjct: 348 GAQGLTLYTPRAEQMLIERLSFTLAPGDALLITGPSGCGKSSLLRALAGLWHNGSGSVSHPPRGEMFFLPQ 418
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A846E629_9CYAN (ABC transporter ATP-binding protein/permease n=1 Tax=Desertifilum sp. SIO1I2 TaxID=2607799 RepID=A0A846E629_9CYAN) HSP 1 Score: 85.9 bits (211), Expect = 3.060e-18 Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 1 Query: 13 LTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 213 L TP+ + + DLS + GES+L+ GPSGCGKSSLLRA+AGLW +G GTI RP QV+F+PQ Sbjct: 137 LNLQTPNHQRTLIADLSVELPPGESLLVMGPSGCGKSSLLRAIAGLWDSGTGTIHRPASEQVLFLPQ 203
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A6I5NLA4_9CYAN (ABC transporter ATP-binding protein/permease n=1 Tax=Leptolyngbya sp. SIOISBB TaxID=2607771 RepID=A0A6I5NLA4_9CYAN) HSP 1 Score: 86.7 bits (213), Expect = 3.220e-18 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 1 Query: 13 LTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 213 LT TP+ + + +DL+ +A S+L+ GPSGCGKSSLLRA+AGLW TGKG IQRP Q++F+PQ Sbjct: 398 LTLQTPNYQRTLIEDLTLELATDSSLLVAGPSGCGKSSLLRAIAGLWNTGKGLIQRPTMQQMLFLPQ 464
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A520GFL5_9BURK (ABC transporter ATP-binding protein/permease (Fragment) n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520GFL5_9BURK) HSP 1 Score: 86.3 bits (212), Expect = 3.790e-18 Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 1 Query: 13 LTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 213 LT +TP ++ +DLS S+A G+ +LITGPSGCGKSSLLRA+AGLW TG GT++ P +V F+PQ Sbjct: 247 LTLYTPRFGRLLVRDLSLSLAPGDGLLITGPSGCGKSSLLRALAGLWRTGSGTVRHPPPQEVFFLPQ 313
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: A0A7S2UTV1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UTV1_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 4.220e-18 Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 1 Query: 7 KGLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 213 + LT TPD V+ +D+ F++ KGE++LI G SG GKSSLLRA+AGLWT G G+I RP + +V F+PQ Sbjct: 87 RNLTVKTPDGNRVLLRDVDFNLNKGENLLIVGDSGVGKSSLLRAIAGLWTCGGGSIARPRNDEVYFLPQ 155
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Match: UPI001FE71013 (ATP-binding cassette domain-containing protein n=1 Tax=Chamaesiphon polymorphus TaxID=2107691 RepID=UPI001FE71013) HSP 1 Score: 84.3 bits (207), Expect = 5.760e-18 Identity = 36/68 (52.94%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 10 GLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLWTTGKGTIQRPVDTQVMFVPQ 213 GLT +TP+ ++ + ++LSF + +S+L+ G SGCGKSSLLRA+AGLW GKGTI+ P T+ +F+PQ Sbjct: 79 GLTLNTPNAEQTLFENLSFELTPAQSLLVVGSSGCGKSSLLRAIAGLWCNGKGTIESPDYTEALFLPQ 146 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10951.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10951.1.1 >prot_C-tenellus_contig10951.1.1 ID=prot_C-tenellus_contig10951.1.1|Name=mRNA_C-tenellus_contig10951.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=71bp GSKGLTFHTPDEKEVICQDLSFSVAKGESVLITGPSGCGKSSLLRAVAGLback to top mRNA from alignment at C-tenellus_contig10951:146..703- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10951.1.1 ID=mRNA_C-tenellus_contig10951.1.1|Name=mRNA_C-tenellus_contig10951.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=558bp|location=Sequence derived from alignment at C-tenellus_contig10951:146..703- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10951:146..703- >mRNA_C-tenellus_contig10951.1.1 ID=mRNA_C-tenellus_contig10951.1.1|Name=mRNA_C-tenellus_contig10951.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=213bp|location=Sequence derived from alignment at C-tenellus_contig10951:146..703- (Choristocarpus tenellus KU2346)back to top |