prot_C-tenellus_contig10940.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10940.1.1
Unique Nameprot_C-tenellus_contig10940.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length214
Homology
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BLAST of mRNA_C-tenellus_contig10940.1.1 vs. uniprot
Match: A0A6H5JG90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG90_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 4.560e-54
Identity = 113/213 (53.05%), Postives = 142/213 (66.67%), Query Frame = 0 
Query:    2 MAAVLNMMATIWESIAPSLEMGINRSCLDLIVETIDGEMLALLHRQYCSKPGPARGAFMRLAGLAGDDLAPGMLEEVVVEMLGLPEDAQPSAYGPTVALLCSWGQHGHLVGAIVDSLQSAFHVQSLTLALAIQPSSALTDSPTVFDGCDRSLIGGRGKRRRSAADNAPGPHGLPPTLALNMLSHLLAGGGGHPATVAARSSIMSSHNIVKNIK 214
            M+ +LN++A+IWESI P+LE  IN   LDLI +T+ GE L++L+R++C +    R AFMRLAGLAG DLAPGMLE+VVVEML LP DA PSAYGPTV LLCSWGQH HLVGA+V+SL+  F    +T   A+  +     S  + DG      GGRG           G   +P  LALNML HLLAGG GHP+T AAR +IM+S   V +++
Sbjct:  588 MSGILNLIASIWESILPALEKTINEPSLDLIQQTVTGEALSILYRRFCGQD-ECRAAFMRLAGLAGGDLAPGMLEDVVVEMLALPADAPPSAYGPTVDLLCSWGQHEHLVGAVVESLRKFFSAPRITTTTAVDEAG----SGEMDDGDHDE--GGRGG----------GGMCIPAPLALNMLGHLLAGGEGHPSTGAARDAIMASDEAVGSLE 783
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BLAST of mRNA_C-tenellus_contig10940.1.1 vs. uniprot
Match: D8LF93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF93_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 6.250e-54
Identity = 116/224 (51.79%), Postives = 144/224 (64.29%), Query Frame = 0 
Query:    2 MAAVLNMMATIWESIAPSLEMGINRSCLDLIVETIDGEMLALLHRQYCSKPGPARGAFMRLAGLAGDDLAPGMLEEVVVEMLGLPEDAQPSAYGPTVALLCSWGQHGHLVGAIVDSLQSAFHVQSLTLALAIQPSSALTDSPTVFDGCDRSLIGGRGKRRRSAADNAPGPHG-----------LPPTLALNMLSHLLAGGGGHPATVAARSSIMSSHNIVKNIK 214
            M+ +LN++A+IWESI P+LE  IN   LDLI +T+ GE L++L+R++ S     R AFMR+AGLAG DLAPGMLE+VVVEML LP DA PSAYGPTV LLCSWGQH HLVGA+V+SL+ AF V   T         A   S  + DG  +S    RGKRR  A+                   +P  LALNML HLLAGG GHP+T AAR +IM+S   V +++
Sbjct:  719 MSGILNLIASIWESILPALEKTINEPSLDLIQQTVTGEALSILYRRF-SGQDECRAAFMRVAGLAGGDLAPGMLEDVVVEMLALPADAPPSAYGPTVDLLCSWGQHEHLVGAVVESLRKAFSVPVKTTTATATDEEA--GSGEIADGKGKSS---RGKRRXPASRKEGNXXXXXXXXXXXXTCIPAPLALNMLGHLLAGGEGHPSTGAARDAIMASDEAVGSLE 936
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10940.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JG90_9PHAE4.560e-5453.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF93_ECTSI6.250e-5451.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10940contigC-tenellus_contig10940:684..4566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10940.1.1mRNA_C-tenellus_contig10940.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10940 681..4566 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10940.1.1 ID=prot_C-tenellus_contig10940.1.1|Name=mRNA_C-tenellus_contig10940.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=214bp
MMAAVLNMMATIWESIAPSLEMGINRSCLDLIVETIDGEMLALLHRQYCS
KPGPARGAFMRLAGLAGDDLAPGMLEEVVVEMLGLPEDAQPSAYGPTVAL
LCSWGQHGHLVGAIVDSLQSAFHVQSLTLALAIQPSSALTDSPTVFDGCD
RSLIGGRGKRRRSAADNAPGPHGLPPTLALNMLSHLLAGGGGHPATVAAR
SSIMSSHNIVKNIK
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