prot_C-tenellus_contig10898.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10898.3.1
Unique Nameprot_C-tenellus_contig10898.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length220
Homology
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BLAST of mRNA_C-tenellus_contig10898.3.1 vs. uniprot
Match: A0A835Z968_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z968_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.980e-8
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 0 
Query:  141 VEDIRGELLVKLREELDAYPSNLKQRAKASGHELTDPTLLRFLEMAYWTL----DAGGRPLIDAINQTISWRESFGAKDITP 218
            + D +   L +L+EE+DA P  L++ A+   HELT+ TLLRFLE++YW +    DAG R L+D I +T+ WR+  GA  + P
Sbjct:   90 MNDQKWAALRQLKEEVDARPE-LRRHAREVQHELTELTLLRFLEVSYWRVEKDGDAGPR-LVDVIARTVEWRDQMGAVAMAP 169
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10898.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z968_9STRA2.980e-843.90CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 6..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..220
IPR036273CRAL/TRIO, N-terminal domain superfamilySUPERFAMILY46938CRAL/TRIO N-terminal domaincoord: 135..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10898contigC-tenellus_contig10898:3270..5238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10898.3.1mRNA_C-tenellus_contig10898.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10898 3246..5238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10898.3.1 ID=prot_C-tenellus_contig10898.3.1|Name=mRNA_C-tenellus_contig10898.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=220bp
MCQGGTALQGTAAKPDDKPNGSHAVEKLPSGRRSKKVLICLSLCLGFCLH
VFVKGAVWWSARDNTCGRNNVQQQEAEDFPEGDMVKHDRRVTLRDRVANL
FRKNGRERRDSKGADAQERLGEESGKGRFAFGHKKRKVGTVEDIRGELLV
KLREELDAYPSNLKQRAKASGHELTDPTLLRFLEMAYWTLDAGGRPLIDA
INQTISWRESFGAKDITPEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036273CRAL/TRIO_N_dom_sf