prot_C-tenellus_contig10879.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10879.2.1
Unique Nameprot_C-tenellus_contig10879.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length198
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10879.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 34..189
e-value: 1.4E-6
score: 30.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 80..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10879contigC-tenellus_contig10879:2896..4849 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10879.2.1mRNA_C-tenellus_contig10879.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10879 2878..4849 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10879.2.1 ID=prot_C-tenellus_contig10879.2.1|Name=mRNA_C-tenellus_contig10879.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=198bp
MLRTRHRTEIGRGRPLVGWDISSFAEFAFVKLGLVEDETAEAVEVLIFAA
DKHHAGEVTLSEFELLFCNGVSAATTRRKARALLIEASAHEKTGNLKAAE
AKCEASIEVWPACAEAHLNLARLLRAGGASVQRAITKVETHLRQAVACAS
PSPLGNEGGGEVEEAAASLLSLLLCQEGRDAEVAILLKDRGLRYSVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf