prot_C-tenellus_contig10796.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10796.1.1
Unique Nameprot_C-tenellus_contig10796.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length56
Homology
[Close]
BLAST of mRNA_C-tenellus_contig10796.1.1 vs. uniprot
Match: A0A836CEK3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEK3_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 6.240e-5
Identity = 26/57 (45.61%), Postives = 35/57 (61.40%), Query Frame = 0 
Query:    1 QIVLTKADLLNPEDLSSCVRLLREDLQSFPG-LVETVPV--VCGTAGAGVTALWQEL 54
            Q+VLTK DLL PE L+  +  + +DL      L+   P+  VCG  GAGVTALW+ +
Sbjct:  234 QLVLTKGDLLLPEQLAQSMAAVTQDLMDIGAKLLAKPPILPVCGHTGAGVTALWENM 290
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10796.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CEK3_9STRA6.240e-545.61P-loop containing nucleoside triphosphate hydrolas... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..56
e-value: 3.5E-6
score: 28.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10796contigC-tenellus_contig10796:2760..2927 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10796.1.1mRNA_C-tenellus_contig10796.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10796 2760..2927 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10796.1.1 ID=prot_C-tenellus_contig10796.1.1|Name=mRNA_C-tenellus_contig10796.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=56bp
QIVLTKADLLNPEDLSSCVRLLREDLQSFPGLVETVPVVCGTAGAGVTAL
WQELEK
back to top