prot_C-tenellus_contig10646.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig10646.2.1
Unique Name	prot_C-tenellus_contig10646.2.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	286

Homology

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BLAST of mRNA_C-tenellus_contig10646.2.1 vs. uniprot
Match: D8LHG8_ECTSI (BEACH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHG8_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 1.380e-39
Identity = 119/299 (39.80%), Postives = 149/299 (49.83%), Query Frame = 0

Query:    1 VGREEVIVPLVLEGVFDHALPILQPVLAQRGGPGATVLGFRVVLEITFLLRSLLKTLSPRTLEAFYAGRRRL-----PTQNRNVDGEGHSALGERKEEEISSIPWLLLSMPLPEPV----PGVDLPWSADKSRRKDWDDSSRDITRQGEGAEAD-VENIVEGDEDVKDRHGGEXXXXXXXXQPAPLSRDEAGEGGLMCGRFICHMEVVRLLALTAMHISTLEDHPDLTDGSVVHSGNITEGSW---GVGVDSIFLKVAEEFFDSFNRAYGGLVFSSPTMVAALRLARELFSPLASLFGY 286
            +  EEV VPLVL  VF   LP L PVLAQRGGP  T  GFR VLE+T LL  LL TL P T+  FY G R       P+ + +  G   +A+  +   E  S+PWLLL+MPLP+PV     G D     D+S       S R   R+  G + D   +   GD        G          PA  + +   +   +  RF+CH+E  RLLA TAM                   G + +G W   G    S  L+ AE FF +F R Y GL  SSPTMVAAL+LA+EL +PLASLFG+
Sbjct: 1434 ISSEEVTVPLVLSRVFHQVLPSLAPVLAQRGGPSTTATGFRSVLEVTSLLGRLLPTLCPETISHFYVGLRPATALSPPSFHADATGTEAAAVTPQAAAEHHSVPWLLLAMPLPQPVFREAGGRDSNLWTDRS-------SDRSTIRRSPGRQEDGFLSPTTGDGGGSAHVDGGRNHPEFSGGPAGGAAEGVCDDADVSTRFVCHVETARLLATTAM-------------------GVLGDGGWEEEGREECSRVLQAAEAFFAAFGRLYCGLSSSSPTMVAALKLAKELHTPLASLFGF 1706

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig10646.2.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig10646.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LHG8_ECTSI	1.380e-39	39.80	BEACH domain-containing protein n=1 Tax=Ectocarpus...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..180

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig10646	contig	C-tenellus_contig10646:2180..4687 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig10646.2.1	mRNA_C-tenellus_contig10646.2.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig10646 2180..4687 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig10646.2.1 ID=prot_C-tenellus_contig10646.2.1|Name=mRNA_C-tenellus_contig10646.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=286bp
VGREEVIVPLVLEGVFDHALPILQPVLAQRGGPGATVLGFRVVLEITFLL
RSLLKTLSPRTLEAFYAGRRRLPTQNRNVDGEGHSALGERKEEEISSIPW
LLLSMPLPEPVPGVDLPWSADKSRRKDWDDSSRDITRQGEGAEADVENIV
EGDEDVKDRHGGEGEGEGEGDQPAPLSRDEAGEGGLMCGRFICHMEVVRL
LALTAMHISTLEDHPDLTDGSVVHSGNITEGSWGVGVDSIFLKVAEEFFD
SFNRAYGGLVFSSPTMVAALRLARELFSPLASLFGY