prot_C-tenellus_contig10380.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10380.2.1
Unique Nameprot_C-tenellus_contig10380.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length197
Homology
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BLAST of mRNA_C-tenellus_contig10380.2.1 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.160e-10
Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 0 
Query:    4 FNPSPKVERELEMLIKTMYHKSFIDLVDKSK--LEDLLNPIIFSYHHLGLWCAVRHGVI-CGEQTIRGRFNHHQRDRKRIRRAKKMIRALLEHLKESMLG 100
            F PS  V  ELE L++ ++ +S     D  +  +E ++ P++FSY HLGLWCA+RH V+ C  + +         DR RI R KK++  L +HL ES LG
Sbjct:   51 FTPSQTVVDELESLMRMLFSESMCGFGDSKEKFVEAVVGPVLFSYQHLGLWCAIRHIVMFCEAENLP--------DRSRITRTKKVVLQLTQHLTESPLG 142
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BLAST of mRNA_C-tenellus_contig10380.2.1 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 5.100e-5
Identity = 28/65 (43.08%), Postives = 37/65 (56.92%), Query Frame = 0 
Query:   36 EDLLNPIIFSYHHLGLWCAVRHGVICGEQTIRGRFNHHQRDRKRIRRAKKMIRALLEHLKESMLG 100
            E ++ P++FSY HLGLWCA+RH  +               DR RI R KK++  L +HL ES LG
Sbjct:  209 EAVVGPVLFSYQHLGLWCAMRHIRVAENLP----------DRSRITRTKKVVLQLTQHLTESPLG 263
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10380.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQM7_9PHAE1.160e-1040.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZW2_ECTSI5.100e-543.08Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10380contigC-tenellus_contig10380:2272..5525 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10380.2.1mRNA_C-tenellus_contig10380.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10380 2272..5525 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10380.2.1 ID=prot_C-tenellus_contig10380.2.1|Name=mRNA_C-tenellus_contig10380.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=197bp
MQSFNPSPKVERELEMLIKTMYHKSFIDLVDKSKLEDLLNPIIFSYHHLG
LWCAVRHGVICGEQTIRGRFNHHQRDRKRIRRAKKMIRALLEHLKESMLG
RVDGNAGFVLDDDESANANPQNEGNVDGMELNGEETGCRDDGSIDGNDGN
DGSGSDHHDSDGHSGGDRNEPRRSDGDGRSRGGTKRKLDAEFLANEG
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