prot_C-tenellus_contig10363.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10363.1.1
Unique Nameprot_C-tenellus_contig10363.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length68
Homology
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BLAST of mRNA_C-tenellus_contig10363.1.1 vs. uniprot
Match: D8LGF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF3_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 5.580e-19
Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 0 
Query:    1 MDGSASEEFRPHRRVLTPGFSGSTHPRVQGLRRINQQLPPTPRPQGIQPNPEAANRSGYHMPDPGLLV 68
            M GSA+E+FRP RRVLTPGFSG+   R QGL RI      TPRP G++ N +A+ RSGY +PDPGL++
Sbjct:    1 MAGSATEQFRPCRRVLTPGFSGTEEARPQGLARIESSPRVTPRPTGLRTNAKASRRSGYDIPDPGLVL 68
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10363.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGF3_ECTSI5.580e-1958.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10363contigC-tenellus_contig10363:1749..1952 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10363.1.1mRNA_C-tenellus_contig10363.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10363 1749..1952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10363.1.1 ID=prot_C-tenellus_contig10363.1.1|Name=mRNA_C-tenellus_contig10363.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=68bp
MDGSASEEFRPHRRVLTPGFSGSTHPRVQGLRRINQQLPPTPRPQGIQPN
PEAANRSGYHMPDPGLLV
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