prot_C-tenellus_contig10360.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10360.2.1
Unique Nameprot_C-tenellus_contig10360.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length111
Homology
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BLAST of mRNA_C-tenellus_contig10360.2.1 vs. uniprot
Match: A0A6H5KD48_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD48_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.170e-20
Identity = 58/98 (59.18%), Postives = 64/98 (65.31%), Query Frame = 0 
Query:    1 MNDRLSELTGGSGGGGRGGVNPFEVAIDINDYGEAPSKAEDG--AFMQGFFDTVNEVKKDIDSIKKACKDLDTLTQQATLTSSATAEADAKAQIHETI 96
            MNDRL ELTGG        V PFE+A                   FM+GFFD VN VKKDID++KKAC DLDTLTQQATLTSSAT EADAK+QI+ TI
Sbjct:    1 MNDRLGELTGGXX--XXXXVAPFEIAXXXXXXXXXXXXXXXXXXGFMEGFFDKVNAVKKDIDAVKKACTDLDTLTQQATLTSSATVEADAKSQINTTI 96
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10360.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KD48_9PHAE1.170e-2059.18t-SNARE coiled-coil homology domain-containing pro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.70coord: 41..104
e-value: 5.7E-7
score: 31.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10360contigC-tenellus_contig10360:883..1501 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10360.2.1mRNA_C-tenellus_contig10360.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10360 344..1665 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10360.2.1 ID=prot_C-tenellus_contig10360.2.1|Name=mRNA_C-tenellus_contig10360.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=111bp
MNDRLSELTGGSGGGGRGGVNPFEVAIDINDYGEAPSKAEDGAFMQGFFD
TVNEVKKDIDSIKKACKDLDTLTQQATLTSSATAEADAKAQIHETITRLS
VLTLCILFTL*
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