prot_C-tenellus_contig10340.4.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10340.4.1
Unique Nameprot_C-tenellus_contig10340.4.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length207
Homology
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BLAST of mRNA_C-tenellus_contig10340.4.1 vs. uniprot
Match: D8LLT9_ECTSI (Plus3 domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT9_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 2.210e-12
Identity = 41/77 (53.25%), Postives = 56/77 (72.73%), Query Frame = 0 
Query:   11 LDAKESKKKESYNMGAQRMRKINERNRVHNVTTDTVKGREKRQEDSRRRQEKANGGSVEEFDPFQRRACRPKILWSV 87
            LD +E++KK+S + GA  MR +NERN+  NV TDT  GR+KR  +++ R+  A  G   +FDPF+RR+CRPKILWSV
Sbjct:  429 LDEREAQKKKSLDSGAAGMRALNERNKTFNVHTDTHVGRKKRLAEAKAREASA-AGDEGDFDPFKRRSCRPKILWSV 504
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10340.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLT9_ECTSI2.210e-1253.25Plus3 domain-containing protein (Fragment) n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10340contigC-tenellus_contig10340:4606..5226 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10340.4.1mRNA_C-tenellus_contig10340.4.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10340 3782..5506 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10340.4.1 ID=prot_C-tenellus_contig10340.4.1|Name=mRNA_C-tenellus_contig10340.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=207bp
MKPRPPPTQQLDAKESKKKESYNMGAQRMRKINERNRVHNVTTDTVKGRE
KRQEDSRRRQEKANGGSVEEFDPFQRRACRPKILWSVQSNKAPASSGVPG
DSPEGEGGGDEAGESKSEASEELAKDGSGAREVADASMQAPHAVLQKAHS
FEGRDVLEAGRAAAMSLKAKGQRMAAPASSEPRRSGLSIANYLSKARKSL
GADPEL*
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