prot_C-tenellus_contig10330.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10330.1.1
Unique Nameprot_C-tenellus_contig10330.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length117
Homology
BLAST of mRNA_C-tenellus_contig10330.1.1 vs. uniprot
Match: D8LU95_ECTSI (Fip1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU95_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 9.630e-44
Identity = 86/117 (73.50%), Postives = 93/117 (79.49%), Query Frame = 0
Query:    1 GTNALVNVASSTSAGGKGDSRGTGGGPSKPLSAAAGIASLTPSMGAPGAVSRPAILSAGMYPPTAELQRATGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLR 117
            GTN LVN    T+ GG   S       SKP+SAAAGIASL PS GAP A ++P+ L  G YPPTAELQ++TGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLR
Sbjct:  275 GTNTLVNA---TTTGGTTAS-------SKPVSAAAGIASLVPSKGAPVATAKPS-LKPGEYPPTAELQQSTGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLR 380          
BLAST of mRNA_C-tenellus_contig10330.1.1 vs. uniprot
Match: A0A6H5JF87_9PHAE (Fip1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF87_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 2.950e-42
Identity = 85/117 (72.65%), Postives = 94/117 (80.34%), Query Frame = 0
Query:    1 GTNALVNVASSTSAGGKGDSRGTGGGPSKPLSAAAGIASLTPSMGAPGAVSRPAILSAGMYPPTAELQRATGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLR 117
            GTN LVN  S+T++G    S        KP+SAAAGIASL PS GAP A ++P+ L  G YPPTAELQ++TGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLR
Sbjct:  274 GTNTLVN--STTTSGTTATS--------KPVSAAAGIASLVPSKGAPVATAKPS-LKPGEYPPTAELQQSTGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLR 379          
BLAST of mRNA_C-tenellus_contig10330.1.1 vs. uniprot
Match: A0A1W0A514_9STRA (Pre-mRNA polyadenylation factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A514_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.860e-16
Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = 0
Query:   61 YPPTAELQRATG----KTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLR 117
            Y PT E     G    +TAFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+
Sbjct:  113 YEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDESSWRDYCTKQLQ 173          
BLAST of mRNA_C-tenellus_contig10330.1.1 vs. uniprot
Match: A0A067C040_SAPPC (Fip1 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C040_SAPPC)

HSP 1 Score: 82.4 bits (202), Expect = 2.360e-16
Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = 0
Query:   61 YPPTAELQRATG----KTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLR 117
            Y PT E     G    +TAFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+
Sbjct:  124 YEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDEASWRDYCAKQLQ 184          
BLAST of mRNA_C-tenellus_contig10330.1.1 vs. uniprot
Match: A0A835YKB3_9STRA (Fip1 motif-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKB3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.600e-16
Identity = 34/57 (59.65%), Postives = 42/57 (73.68%), Query Frame = 0
Query:   61 YPPTAELQRATGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLR 117
            YPP  ELQ   G++AF V +D +E+ PWR PGVD++DFFNYGFTE +WR Y   QLR
Sbjct:  207 YPPLEELQLRYGRSAFGVRMDELEDTPWRRPGVDLSDFFNYGFTEGTWRAYLLAQLR 263          
BLAST of mRNA_C-tenellus_contig10330.1.1 vs. uniprot
Match: A0A1V9YWA6_9STRA (Pre-mRNA polyadenylation factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWA6_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.670e-16
Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = 0
Query:   61 YPPTAELQRATG----KTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLR 117
            Y PT E     G    +TAFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+
Sbjct:  123 YEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDETSWRDYCAKQLQ 183          
BLAST of mRNA_C-tenellus_contig10330.1.1 vs. uniprot
Match: T0QKY1_SAPDV (Fip1 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QKY1_SAPDV)

HSP 1 Score: 82.4 bits (202), Expect = 3.480e-16
Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = 0
Query:   61 YPPTAELQRATG----KTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLR 117
            Y PT E     G    +TAFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+
Sbjct:  127 YEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDEASWRDYCAKQLQ 187          
BLAST of mRNA_C-tenellus_contig10330.1.1 vs. uniprot
Match: UPI00155B1E59 (LOW QUALITY PROTEIN: FIP1[V]-like protein n=1 Tax=Vitis riparia TaxID=96939 RepID=UPI00155B1E59)

HSP 1 Score: 80.5 bits (197), Expect = 2.930e-15
Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 0
Query:   66 ELQRATGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEK--QLR 117
            E    + KT FDVDID  EE+PWRHPGVDI+DFFN+GF E+SW+ YC++  QLR
Sbjct:   92 EFTLPSHKTIFDVDIDSFEEKPWRHPGVDISDFFNFGFNEESWKQYCKQLEQLR 145          
BLAST of mRNA_C-tenellus_contig10330.1.1 vs. uniprot
Match: F6HYI9_VITVI (Fip1 domain-containing protein n=2 Tax=Vitis TaxID=3603 RepID=F6HYI9_VITVI)

HSP 1 Score: 80.5 bits (197), Expect = 2.970e-15
Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 0
Query:   66 ELQRATGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEK--QLR 117
            E    + KT FDVDID  EE+PWRHPGVDI+DFFN+GF E+SW+ YC++  QLR
Sbjct:  405 EFTLPSHKTIFDVDIDSFEEKPWRHPGVDISDFFNFGFNEESWKQYCKQLEQLR 458          
BLAST of mRNA_C-tenellus_contig10330.1.1 vs. uniprot
Match: A0A7S4DHM3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHM3_HETAK)

HSP 1 Score: 77.8 bits (190), Expect = 6.470e-15
Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 0
Query:   61 YPPTAELQRATGK--TAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQL 116
            +PP     +  GK  +AFD++IDG+++ PWR PGVDI+D+FNYG TE +WR YC KQL
Sbjct:  143 FPPLPTELQHPGKRNSAFDIEIDGLDDHPWRRPGVDISDYFNYGLTEKTWREYCIKQL 200          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10330.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU95_ECTSI9.630e-4473.50Fip1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JF87_9PHAE2.950e-4272.65Fip1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A1W0A514_9STRA1.860e-1662.30Pre-mRNA polyadenylation factor n=1 Tax=Thraustoth... [more]
A0A067C040_SAPPC2.360e-1662.30Fip1 domain-containing protein n=1 Tax=Saprolegnia... [more]
A0A835YKB3_9STRA2.600e-1659.65Fip1 motif-domain-containing protein n=1 Tax=Tribo... [more]
A0A1V9YWA6_9STRA2.670e-1662.30Pre-mRNA polyadenylation factor n=1 Tax=Achlya hyp... [more]
T0QKY1_SAPDV3.480e-1662.30Fip1 domain-containing protein n=1 Tax=Saprolegnia... [more]
UPI00155B1E592.930e-1562.96LOW QUALITY PROTEIN: FIP1[V]-like protein n=1 Tax=... [more]
F6HYI9_VITVI2.970e-1562.96Fip1 domain-containing protein n=2 Tax=Vitis TaxID... [more]
A0A7S4DHM3_HETAK6.470e-1555.17Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007854Pre-mRNA polyadenylation factor Fip1 domainPFAMPF05182Fip1coord: 77..116
e-value: 3.4E-22
score: 77.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availablePANTHERPTHR36884:SF4FIP1[III]-LIKE PROTEINcoord: 73..113
NoneNo IPR availablePANTHERPTHR36884FIP1[III]-LIKE PROTEINcoord: 73..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10330contigC-tenellus_contig10330:80..1115 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10330.1.1mRNA_C-tenellus_contig10330.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10330 80..1115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10330.1.1 ID=prot_C-tenellus_contig10330.1.1|Name=mRNA_C-tenellus_contig10330.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=117bp
GTNALVNVASSTSAGGKGDSRGTGGGPSKPLSAAAGIASLTPSMGAPGAV
SRPAILSAGMYPPTAELQRATGKTAFDVDIDGMEEQPWRHPGVDIADFFN
YGFTEDSWRVYCEKQLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007854Fip1_dom