prot_C-tenellus_contig10305.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10305.1.1
Unique Nameprot_C-tenellus_contig10305.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length155
Homology
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A6H5JH84_9PHAE (Mre11_DNA_bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH84_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 1.220e-47
Identity = 98/155 (63.23%), Postives = 112/155 (72.26%), Query Frame = 0
Query:    1 MVNELRQEEALDPPEPPEGQEYLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGAGGDGLCSGLKGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETLE 155
            MV ELR+E+      PP+GQE  + KR+QVLVRL+VEHSDFPTLNNQRFGSQFMGKVANPSDLLL                         GGL DP+RPD+L ++RVEDLV  NLE +DKKLSLLVEP+LK+ALEDYVYK DAQAV D+VKE LE
Sbjct:  305 MVEELRKEDEELALTPPQGQE--IEKRNQVLVRLKVEHSDFPTLNNQRFGSQFMGKVANPSDLLLXXXXXXXXXXXXXXXXXXXXKSSRSGGLSDPIRPDNLADIRVEDLVTENLENADKKLSLLVEPKLKMALEDYVYKQDAQAVPDMVKEALE 457          
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A7S2UFV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UFV9_9STRA)

HSP 1 Score: 134 bits (338), Expect = 8.910e-34
Identity = 78/133 (58.65%), Postives = 92/133 (69.17%), Query Frame = 0
Query:   24 VAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRR--ASGGAGGDGLCSGLKGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETL 154
            + K DQVLVRLRVEHS F TLNNQRFG++F+G VANPSD+LLF+RRR       G DG     K KG    L  P+ PD L+E+ VEDLV  NLETS+KKL LL EP L LALED+V K   QA+N+ V + L
Sbjct:  463 IDKPDQVLVRLRVEHSGFSTLNNQRFGAKFVGDVANPSDILLFHRRRQGVETTVGEDGKPRAKKKKGSK--LDQPLAPDDLEELNVEDLVKDNLETSEKKLELLHEPELGLALEDFVSKEQRQAINEAVADLL 593          
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A7R9ZG15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZG15_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.090e-30
Identity = 67/112 (59.82%), Postives = 83/112 (74.11%), Query Frame = 0
Query:   26 KRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRA--SGGAGGDGLCSGLKGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALE 135
            K DQVLVRL+VEHS F TLNNQRFGS+F+ +VANPSD+LLF+RR+   +  AGG     G K K GGG L +P+ P+ L E+ VEDLV  NLET+DKKL +L E RL +AL+
Sbjct:    1 KPDQVLVRLKVEHSGFGTLNNQRFGSRFVSEVANPSDILLFHRRKQVETVKAGG-----GSKSKRGGGILDEPLEPEELAEINVEDLVKENLETADKKLQVLDESRLGVALD 107          
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A7S4DCZ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCZ4_HETAK)

HSP 1 Score: 121 bits (304), Expect = 1.130e-30
Identity = 73/137 (53.28%), Postives = 94/137 (68.61%), Query Frame = 0
Query:   22 YLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGA---GGDGLCSGLKGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETLE 155
            + V  R+Q LVRL+VEH+ FP+LNNQRFGSQF+G+VANP+DLLLF+RRR +      GGDG  S + G G   GL  P+ P  LD  +VEDLV   L    ++L+LL E  L LALE+YVYK D +A+ + V+ TLE
Sbjct:    2 FRVEHREQALVRLKVEHTGFPSLNNQRFGSQFVGRVANPADLLLFHRRRPAQEPKTEGGDG--SSVAG-GPPAGLAVPLDPAELDAPKVEDLVRETLAAGARRLALLDERALHLALENYVYKEDIRAIQEAVEVTLE 135          
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A7S4MXX5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MXX5_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.990e-30
Identity = 71/136 (52.21%), Postives = 92/136 (67.65%), Query Frame = 0
Query:   19 GQEYLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGAGGDGLCSGLKGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETL 154
            GQ+Y + K DQVLVRL+VEHS F TLNNQRFGS+F+  +ANPSD+LLF+RR+        G  +G K     G L  P+ P+ L EV VEDLV  NLE +DKKL +L E RL +AL+++V K   QA+ D V++ L
Sbjct:  427 GQKYKLMKPDQVLVRLKVEHSGFGTLNNQRFGSRFVTDIANPSDILLFHRRKQVESVKKGGSKAGSKR----GELDKPMEPEELAEVNVEDLVKENLELADKKLQVLDERRLGIALDEFVSKEQRQAIADTVEDEL 558          
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A7S1Z5E1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z5E1_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.740e-29
Identity = 70/134 (52.24%), Postives = 89/134 (66.42%), Query Frame = 0
Query:   22 YLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGAGGDGLCSGL-KGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETL 154
            + + K DQVLVRL+VEH+ F TLNNQRFG++F+ +VANPSDLLLF+RRR       D   S   K K     L +P+ P+ L E+ VEDL+  NLE +DKKL +L E RL  AL+++V K   QA ND V ETL
Sbjct:  347 FTIQKPDQVLVRLKVEHTGFSTLNNQRFGARFVSEVANPSDLLLFHRRRQL-----DAHDSATNKSKTNSSLLAEPLDPEELAELNVEDLIQDNLEMADKKLEILDEKRLGFALDEFVTKEQRQAFNDNVAETL 475          
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: K3W621_GLOUD (Mre11_DNA_bind domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W621_GLOUD)

HSP 1 Score: 116 bits (290), Expect = 3.370e-27
Identity = 68/155 (43.87%), Postives = 93/155 (60.00%), Query Frame = 0
Query:    1 MVNELRQEEALDPPEPPEGQEYLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGAGGDGLCSGLKGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETLE 155
            ++ E  QE+ L P       + L ++  QVLVRLRVEH+ FP L+NQRFGS+F+GKVANP+D+LLFYRR+       D        KG    L +P+RP  LD + +ED++   L   D+KL  L E  L +ALE YV K  A A+++ V + LE
Sbjct:  345 LLQEAEQEQRLQP-------QSLPSELKQVLVRLRVEHTGFPVLHNQRFGSRFVGKVANPNDILLFYRRKKERAYALDQAGEAKTKKGI---LMEPIRPTRLDTITIEDILQRKLNLPDQKLVFLPEKPLAIALESYVVKNIASALDEFVDQQLE 489          
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A5D6XXR9_9STRA (Mre11_DNA_bind domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXR9_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.950e-26
Identity = 70/155 (45.16%), Postives = 94/155 (60.65%), Query Frame = 0
Query:    1 MVNELRQEEALDPPEPPEGQEYLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGAGGDGLCSGLKGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETLE 155
            ++ +   E+   PP  PE +        QVLVRLRVEH+ FP L+NQRFGS+F+GKVANP+D+LLFYRR+       D   +GL+GK     L +P+RP  LD V +ED++   L   D++L  L E  L LALE YV K  A A+++ V   LE
Sbjct:  352 LLRDAEDEQREQPPAHPELK--------QVLVRLRVEHTGFPVLHNQRFGSRFVGKVANPNDILLFYRRKRDRVFALDKDGAGLQGKKDV--LSEPIRPTRLDTVTIEDILQRKLHLPDQQLVFLPEKPLALALEQYVVKNVASALDEFVTAQLE 496          
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A4D9CWI9_9STRA (Double-strand break repair protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWI9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.460e-25
Identity = 70/157 (44.59%), Postives = 92/157 (58.60%), Query Frame = 0
Query:    1 MVNELRQEEALDPPEPPEGQEYLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGAGGDGLCSGLKGKGGGG--GLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETLE 155
            ++ E R++    PP P  GQ   +   +QVLVRL+VE+S F TLNNQRFG +F+G+VANPSD+LLFYR R                  G G  G+W        +EV+VEDLV   +E S+KKL L+ EP L  ALED+V K  A A+ D V+  +E
Sbjct:  355 LIQEAREDHPPPPPLP--GQSLRLQHPEQVLVRLKVEYSGFFTLNNQRFGQRFLGQVANPSDILLFYRARKGERXXXXXXXXXXXXXEGAGRAGVWG-----EREEVKVEDLVRLEVEESEKKLKLMTEPELHEALEDFVSKNTASAIADAVELAVE 504          
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A7S3V610_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V610_9STRA)

HSP 1 Score: 108 bits (270), Expect = 5.170e-25
Identity = 60/137 (43.80%), Postives = 88/137 (64.23%), Query Frame = 0
Query:   21 EYLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGAGGDGLCSGLKGKGGGGGL---WDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETL 154
            ++ V K +QVLVRL+VEHS F TL+NQRFGS F+ +VANPSD+LLF+RRR++     D   S  K      GL    +P+ P  +++V +ED+V   L+  +KK+ +L E RL +A+EDYV K     + + VK+ +
Sbjct:   27 QFRVDKAEQVLVRLKVEHSGFSTLHNQRFGSLFVKEVANPSDILLFHRRRST-----DAKSSKKKKSKDAEGLDGSSEPIYPADIEDVNIEDIVRDTLDNQEKKMMILDESRLSIAVEDYVVKETKATIGESVKKMI 158          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH84_9PHAE1.220e-4763.23Mre11_DNA_bind domain-containing protein n=2 Tax=E... [more]
A0A7S2UFV9_9STRA8.910e-3458.65Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7R9ZG15_9STRA1.090e-3059.82Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S4DCZ4_HETAK1.130e-3053.28Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4MXX5_9STRA1.990e-3052.21Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1Z5E1_9STRA1.740e-2952.24Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
K3W621_GLOUD3.370e-2743.87Mre11_DNA_bind domain-containing protein n=1 Tax=G... [more]
A0A5D6XXR9_9STRA2.950e-2645.16Mre11_DNA_bind domain-containing protein n=1 Tax=P... [more]
A0A4D9CWI9_9STRA3.460e-2544.59Double-strand break repair protein n=1 Tax=Nannoch... [more]
A0A7S3V610_9STRA5.170e-2543.80Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007281Mre11, DNA-bindingSMARTSM01347Mre11_DNA_bind_2coord: 5..137
e-value: 6.7E-10
score: 48.9
IPR007281Mre11, DNA-bindingPFAMPF04152Mre11_DNA_bindcoord: 15..137
e-value: 9.2E-21
score: 74.9
IPR038487Mre11, capping domainGENE3D3.30.110.110Mre11, capping domaincoord: 1..75
e-value: 6.6E-17
score: 63.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR10139DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11coord: 27..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10305contigC-tenellus_contig10305:1581..5296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10305.1.1mRNA_C-tenellus_contig10305.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10305 741..5296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10305.1.1 ID=prot_C-tenellus_contig10305.1.1|Name=mRNA_C-tenellus_contig10305.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=155bp
MVNELRQEEALDPPEPPEGQEYLVAKRDQVLVRLRVEHSDFPTLNNQRFG
SQFMGKVANPSDLLLFYRRRASGGAGGDGLCSGLKGKGGGGGLWDPVRPD
SLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLV
KETLE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007281Mre11_DNA-bd
IPR038487Mre11_capping_dom