prot_C-tenellus_contig10259.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10259.1.1
Unique Nameprot_C-tenellus_contig10259.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length156
Homology
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BLAST of mRNA_C-tenellus_contig10259.1.1 vs. uniprot
Match: D7FPV9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV9_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 3.490e-17
Identity = 55/84 (65.48%), Postives = 60/84 (71.43%), Query Frame = 0 
Query:    1 RGERLRRREEEREAKRAAKRVKLGKCPKAPGRSDSHEDRGKKRATKRRLEVARLGRLVAKQEELLGDYHPPKVKEVLDPELKRK 84
            RGERLR+RE ER  KRA KR KLGK P    RS  +E + KK A KRRLE+ARL RLV+KQEELL DY PP     LDPELKRK
Sbjct:    3 RGERLRKREAERAEKRAKKRRKLGKKPLTVDRSGGYESQPKKHANKRRLELARLERLVSKQEELLRDYRPPVHVAPLDPELKRK 86
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10259.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPV9_ECTSI3.490e-1765.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10259contigC-tenellus_contig10259:141..1321 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10259.1.1mRNA_C-tenellus_contig10259.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10259 3..1321 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10259.1.1 ID=prot_C-tenellus_contig10259.1.1|Name=mRNA_C-tenellus_contig10259.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=156bp
RGERLRRREEEREAKRAAKRVKLGKCPKAPGRSDSHEDRGKKRATKRRLE
VARLGRLVAKQEELLGDYHPPKVKEVLDPELKRKVSVVPVLYGSAVSLLP
CGTPPFYFCGTGALLCGPTTVLPGSTTDLCDTDTTVLCSNIVALGANKET
KVLRL*
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