prot_C-tenellus_contig10227.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig10227.1.2
Unique Name	prot_C-tenellus_contig10227.1.2
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	265

Homology

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BLAST of mRNA_C-tenellus_contig10227.1.2 vs. uniprot
Match: D7FKL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL3_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 1.130e-29
Identity = 85/190 (44.74%), Postives = 126/190 (66.32%), Query Frame = 0

Query:   68 EMERELRLQRLQQVREQSREHAAAVREEYRQRHRDGMQEAVEKTRRDFETTKRADLAAMNSQLQQKLLGVGCAHRLAVCTKMAQEREGERIRATRSVSAERRRSRTTKAIEKRAAELREAGQEEVVAHQRLQVWRGIGEAGRSCAKDYQQRRASRTLASEEQRQNSERQQRERAVRGREVKLAGSRVTQV 257
            E+E+ LRL+RL+QVR+QSR+ AAAVREEYR+R  +  + A+++++R FE  + A+L ++N QLQ KLL VG AHR+A C+ +A+E E ER+RA RSVSAERRR+R   A  KR  ELREA +E  +A QR +VW+  G+  R  A++    + +   A   + +    + R+RA +G  V+   + V +V
Sbjct:    2 EIEKGLRLRRLEQVRQQSRQQAAAVREEYRRRQAENKRAALQESKRHFEDNRAAELLSLNQQLQAKLLEVGTAHRMAACSTLAREGEEERLRAKRSVSAERRRNRNLLAATKRETELREARRESDLAQQRQEVWKDEGDDERLRAREAAVMQEAVAAARRAREEFESERLRQRAEKGGSVRTTQAPVVEV 191

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig10227.1.2 vs. uniprot

BLAST of mRNA_C-tenellus_contig10227.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FKL3_ECTSI	1.130e-29	44.74	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 75..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig10227	contig	C-tenellus_contig10227:510..3837 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig10227.1.2	mRNA_C-tenellus_contig10227.1.2	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig10227 510..3883 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig10227.1.2 ID=prot_C-tenellus_contig10227.1.2|Name=mRNA_C-tenellus_contig10227.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=265bp
MPQSNSHRRKMGVAVGGTPAERGRGGGATATRHVGGEANRETRHKSVPKY
PYGHLRYSTGEAEAVRKEMERELRLQRLQQVREQSREHAAAVREEYRQRH
RDGMQEAVEKTRRDFETTKRADLAAMNSQLQQKLLGVGCAHRLAVCTKMA
QEREGERIRATRSVSAERRRSRTTKAIEKRAAELREAGQEEVVAHQRLQV
WRGIGEAGRSCAKDYQQRRASRTLASEEQRQNSERQQRERAVRGREVKLA
GSRVTQVYAGEDRV*