prot_C-tenellus_contig1013.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig1013.2.1
Unique Nameprot_C-tenellus_contig1013.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length165
Homology
BLAST of mRNA_C-tenellus_contig1013.2.1 vs. uniprot
Match: D7G631_ECTSI (Sld5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G631_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 2.100e-52
Identity = 91/120 (75.83%), Postives = 105/120 (87.50%), Query Frame = 0
Query:    1 MTVSALEKVLREERDNDKSFTPLPHHYLEIASLLLNSASDDIVEADRVRTLLEDVENVRKAKMYEGMGAAAQQVNQAVQVNDLGAMELLTVRNCFAEALGNLYVVSGMKASDERARELGE 120
            M+V  LE+VLR ER++   FTPLPHHYLEIASLLLN+ASDDI E DRVRTLLEDVENVR+AKMYEGMG+AAQ+V QAV+VNDLGAMELL VR+ FAEAL +LYVVSG K++D RAR+L E
Sbjct:   77 MSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIEEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLYVVSGQKSADHRARDLEE 196          
BLAST of mRNA_C-tenellus_contig1013.2.1 vs. uniprot
Match: A0A836CII2_9STRA (Sld5 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CII2_9STRA)

HSP 1 Score: 119 bits (297), Expect = 3.820e-30
Identity = 64/117 (54.70%), Postives = 87/117 (74.36%), Query Frame = 0
Query:    1 MTVSALEKVLREERDNDKSFTPLPHHYLEIASLLLNSASDDI-VEADRVRTLLEDVENVRKAKMYEGMGAAAQQVNQAVQVNDLGAMELLTVRNCFAEALGNLYVVSGMKASDERAR 116
            MT  +LE+VL  ER  +++F  LP HYLEI+SLLL+ A+DD+  + DR+R LLED+ENVR+ KMY+GMG AAQ+ + A++VN +GAMELL VR  F+ AL ++Y +SG K   E AR
Sbjct:   83 MTAESLERVLAAER-REETFAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGMGDAAQRADGAIKVNRIGAMELLPVRTFFSAALSSMYDISGAKGRAEVAR 198          
BLAST of mRNA_C-tenellus_contig1013.2.1 vs. uniprot
Match: A0A2D4C9F5_PYTIN (DNA replication complex GINS protein PSF2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9F5_PYTIN)

HSP 1 Score: 79.7 bits (195), Expect = 3.280e-15
Identity = 46/126 (36.51%), Postives = 73/126 (57.94%), Query Frame = 0
Query:    2 TVSALEKVLREERDNDKSFTPLPHHYLEIASLLLNSASDDIVEADRVRTLLEDVENVRKAKMYEGMGAAAQQVNQ-----AVQVNDLGAMELLTVRNCFAEALGNLYVVSGMKASDERARELGEGS 122
            +V  L + L  E+D+D  F  LP HYLEIASLL   A++DI + + +R+LLED++NVR+ K+  G+   A  V       A+Q+N++GA+E+ +VR     +L   Y ++ +   +    E G  S
Sbjct:   79 SVDYLSQRLEREKDSDV-FEELPFHYLEIASLLFKHAAEDIEQIEHIRSLLEDIQNVRQDKIRNGLYKIANDVQSGGTAYAIQMNNIGALEVNSVRQFMIGSLNKFYRLAKLSEDENDGDEYGSQS 203          
BLAST of mRNA_C-tenellus_contig1013.2.1 vs. uniprot
Match: A0A2G5EAN9_AQUCA (DNA replication complex GINS protein PSF2 n=2 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5EAN9_AQUCA)

HSP 1 Score: 78.2 bits (191), Expect = 9.440e-15
Identity = 44/103 (42.72%), Postives = 65/103 (63.11%), Query Frame = 0
Query:    1 MTVSALEKVLREERDNDKSFTPLPHHYLEIASLLLNSASDDIVEADRVRTLLEDVENVRKAKMYEGMGAAAQQVNQAVQVNDLGAMELLTVRNCFAEALGNLY 103
            M+V  L +VL EERD+ + F PLP HY+EI+ LL + A +DI E   VR+L+ED+ +VR  K+  G+   + + + AV++ +L AME+  VR  F  AL   Y
Sbjct:   77 MSVEKLTRVLEEERDSPREFQPLPFHYVEISKLLFDHAREDIPEVYMVRSLVEDIRDVRFHKVEIGLQKISSRTH-AVKLKNLSAMEVNIVRPFFVRALQAFY 178          
BLAST of mRNA_C-tenellus_contig1013.2.1 vs. uniprot
Match: A0A5J5ATC3_9ASTE (DNA replication complex GINS protein PSF2 n=3 Tax=Nyssaceae TaxID=4289 RepID=A0A5J5ATC3_9ASTE)

HSP 1 Score: 77.8 bits (190), Expect = 1.350e-14
Identity = 46/118 (38.98%), Postives = 73/118 (61.86%), Query Frame = 0
Query:    1 MTVSALEKVLREERDNDKSFTPLPHHYLEIASLLLNSASDDIVEADRVRTLLEDVENVRKAKMYEGMGAAAQQVNQAVQVNDLGAMELLTVRNCFAEALGNLYVVSG---MKASDERA 115
            M+V  L +VL  ERD+++ F PLP HY+EI+ LL + A DDI E   VR+L+ED+++VR  K+  G+   +++ + A+++ +L AME+  VR     AL   Y +     ++ SD RA
Sbjct:   77 MSVEKLTQVLEAERDSERFFQPLPFHYVEISRLLFDHARDDIPEVYMVRSLIEDIKDVRFHKIGTGLEIISERTH-ALKLKNLSAMEVNIVRPFVVRALQTFYKLDSPEMIQESDRRA 193          
BLAST of mRNA_C-tenellus_contig1013.2.1 vs. uniprot
Match: A0A7S3X5E7_EMIHU (DNA replication complex GINS protein PSF2 n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X5E7_EMIHU)

HSP 1 Score: 77.0 bits (188), Expect = 2.780e-14
Identity = 42/97 (43.30%), Postives = 61/97 (62.89%), Query Frame = 0
Query:    6 LEKVLREERDNDKSFTPLPHHYLEIASLLLNSASDDIVEADRVRTLLEDVENVRKAKMYEGMGAAAQQVNQAVQVNDLGAMELLTVRNCFAEALGNL 102
            L+  L EERDN   F+ LPHHY+EIA  LL  ASDD+ EA+++R L+ D+E+VR+ K+  G+          V +  + AMEL  +RN  A+AL ++
Sbjct:   76 LQASLAEERDNPDRFSALPHHYVEIAKELLQIASDDLPEANKIRGLVADIEDVRRTKLQTGLRNLDADTT-LVHLKHVSAMELHGIRNVAAKALDHM 171          
BLAST of mRNA_C-tenellus_contig1013.2.1 vs. uniprot
Match: A0A2R6RWY4_ACTCC (DNA replication complex GINS protein (Fragment) n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6RWY4_ACTCC)

HSP 1 Score: 76.3 bits (186), Expect = 3.280e-14
Identity = 44/99 (44.44%), Postives = 64/99 (64.65%), Query Frame = 0
Query:    1 MTVSALEKVLREERDNDKSFTPLPHHYLEIASLLLNSASDDIVEADRVRTLLEDVENVRKAKMYEGMGAAAQQVNQAVQVNDLGAMELLTVRNCFAEAL 99
            M V  L +VL  ERD+ KSF PLP HY+EI+ LL + A DDI +   VR+L+ED+++VR  K+  G+   +Q+   A+++N L AME+  VR    +AL
Sbjct:   77 MLVEKLMQVLEAERDSQKSFQPLPFHYVEISRLLFDHARDDIPDIYMVRSLIEDIKDVRFYKIGTGLEVISQRTT-ALKLNHLTAMEVNIVRPFLVKAL 174          
BLAST of mRNA_C-tenellus_contig1013.2.1 vs. uniprot
Match: A0A200QEA8_9MAGN (DNA replication complex GINS protein PSF2 n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QEA8_9MAGN)

HSP 1 Score: 76.6 bits (187), Expect = 3.560e-14
Identity = 43/103 (41.75%), Postives = 64/103 (62.14%), Query Frame = 0
Query:    1 MTVSALEKVLREERDNDKSFTPLPHHYLEIASLLLNSASDDIVEADRVRTLLEDVENVRKAKMYEGMGAAAQQVNQAVQVNDLGAMELLTVRNCFAEALGNLY 103
            M+V  L +VL  ERD+ + F PLP HY+EI+ LL + A +DI +   VR+L+ED+ +VR  K+  G+   A + + AV++ +L AME+  VR  F  AL   Y
Sbjct:   77 MSVGKLTQVLEAERDSPREFQPLPFHYVEISRLLFDHAREDIPDVYMVRSLIEDIRDVRFHKVESGLETIAARTH-AVKLKNLSAMEVNIVRPFFVRALQAFY 178          
BLAST of mRNA_C-tenellus_contig1013.2.1 vs. uniprot
Match: A0A6A3SX89_9STRA (DNA replication complex GINS protein PSF2 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SX89_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.610e-14
Identity = 43/119 (36.13%), Postives = 73/119 (61.34%), Query Frame = 0
Query:    1 MTVSALEKVLREERDNDKSFTPLPHHYLEIASLLLNSASDDIVEADRVRTLLEDVENVRKAKMYEGMGAAAQQVNQA------VQVNDLGAMELLTVRNCFAEALGNLYVVSGMKASDE 113
            ++V  L   L  E+ +D +F  LP HYLE+ASLLL +A +D+ + + +R+LLED++NVR+ K+  G+   A  V Q+      +Q+N++ A+E+ +VR     +L   Y +S + A +E
Sbjct:   73 LSVDYLTTRLEREKTSD-AFEELPFHYLEVASLLLKNAPEDLNQGEHMRSLLEDLQNVRQDKIRNGLSRIAGDVVQSGGSASVIQMNNISALEINSVREFMIGSLNQFYRLSQLNAEEE 190          
BLAST of mRNA_C-tenellus_contig1013.2.1 vs. uniprot
Match: G4ZBG3_PHYSP (DNA replication complex GINS protein PSF2 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZBG3_PHYSP)

HSP 1 Score: 76.6 bits (187), Expect = 4.610e-14
Identity = 43/119 (36.13%), Postives = 73/119 (61.34%), Query Frame = 0
Query:    1 MTVSALEKVLREERDNDKSFTPLPHHYLEIASLLLNSASDDIVEADRVRTLLEDVENVRKAKMYEGMGAAAQQVNQA------VQVNDLGAMELLTVRNCFAEALGNLYVVSGMKASDE 113
            ++V  L   L  E+ +D +F  LP HYLE+ASLLL +A +D+ + + +R+LLED++NVR+ K+  G+   A  V Q+      +Q+N++ A+E+ +VR     +L   Y +S + A D+
Sbjct:   73 LSVDYLMSRLEREKASD-AFEELPFHYLEVASLLLKNAPEDLDQGEHLRSLLEDLQNVRQDKIRNGLSRIAGDVVQSGGSASVIQMNNISALEINSVREFMIGSLNQFYRLSRLNAEDD 190          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1013.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G631_ECTSI2.100e-5275.83Sld5 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836CII2_9STRA3.820e-3054.70Sld5 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A2D4C9F5_PYTIN3.280e-1536.51DNA replication complex GINS protein PSF2 n=1 Tax=... [more]
A0A2G5EAN9_AQUCA9.440e-1542.72DNA replication complex GINS protein PSF2 n=2 Tax=... [more]
A0A5J5ATC3_9ASTE1.350e-1438.98DNA replication complex GINS protein PSF2 n=3 Tax=... [more]
A0A7S3X5E7_EMIHU2.780e-1443.30DNA replication complex GINS protein PSF2 n=2 Tax=... [more]
A0A2R6RWY4_ACTCC3.280e-1444.44DNA replication complex GINS protein (Fragment) n=... [more]
A0A200QEA8_9MAGN3.560e-1441.75DNA replication complex GINS protein PSF2 n=1 Tax=... [more]
A0A6A3SX89_9STRA4.610e-1436.13DNA replication complex GINS protein PSF2 n=3 Tax=... [more]
G4ZBG3_PHYSP4.610e-1436.13DNA replication complex GINS protein PSF2 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.1020coord: 2..118
e-value: 1.6E-30
score: 107.3
NoneNo IPR availableCDDcd11712GINS_A_psf2coord: 1..106
e-value: 1.15362E-36
score: 120.792
IPR021151GINS subunit, domain APFAMPF05916Sld5coord: 3..87
e-value: 3.9E-9
score: 36.9
IPR007257DNA replication complex GINS protein Psf2PANTHERPTHR12772DNA REPLICATION COMPLEX GINS PROTEIN PSF2coord: 1..118
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 1..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1013contigC-tenellus_contig1013:4423..6047 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1013.2.1mRNA_C-tenellus_contig1013.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig1013 4201..6098 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig1013.2.1 ID=prot_C-tenellus_contig1013.2.1|Name=mRNA_C-tenellus_contig1013.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=165bp
MTVSALEKVLREERDNDKSFTPLPHHYLEIASLLLNSASDDIVEADRVRT
LLEDVENVRKAKMYEGMGAAAQQVNQAVQVNDLGAMELLTVRNCFAEALG
NLYVVSGMKASDERARELGEGSVGNDYGADAGIGVGVGVSDLGEGADGGT
SRLGGSRRVRRFRN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021151GINS_A
IPR007257GINS_Psf2
IPR036224GINS_bundle-like_dom_sf