prot_C-tenellus_contig10042.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig10042.3.1
Unique Name	prot_C-tenellus_contig10042.3.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	135

Homology

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BLAST of mRNA_C-tenellus_contig10042.3.1 vs. uniprot
Match: D8LKH1_ECTSI (Uracil-DNA glycosylase superfamily protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKH1_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 2.630e-55
Identity = 84/121 (69.42%), Postives = 98/121 (80.99%), Query Frame = 0

Query:    7 SVSDTEWHGSPKCAVNCSYNVLEYAWEPHEDFTRRYGG-RSLGRALLVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGSVGKPIVEHPKRLVQGFDCKRSEVSGKRLWGFFKRKFGTADSW 126
            S+ D +W G+ K  V+CSYNVLEYA E +E +T+RYGG R  GRA +VGMNPGPWGMVQTGVPFGEV  VRDWL V G+VG+P  EH KR V GFDC+RSEVSG RLWGFF+R+FGTAD+W
Sbjct:   72 SLKDRKWKGTSKQPVSCSYNVLEYASETNEAYTQRYGGGRPFGRAFVVGMNPGPWGMVQTGVPFGEVGFVRDWLKVQGAVGRPSKEHTKRPVHGFDCQRSEVSGTRLWGFFERRFGTADAW 192

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BLAST of mRNA_C-tenellus_contig10042.3.1 vs. uniprot
Match: A0A2A2QJU9_9BACT (Single-stranded DNA-binding protein n=1 Tax=Verrucomicrobiae bacterium Tous-C5FEB TaxID=1982331 RepID=A0A2A2QJU9_9BACT)

HSP 1 Score: 151 bits (381), Expect = 2.780e-43
Identity = 68/106 (64.15%), Postives = 79/106 (74.53%), Query Frame = 0

Query:   21 VNCSYNVLEYAWEPHEDFTRRYGGRSLGRALLVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGSVGKPIVEHPKRLVQGFDCKRSEVSGKRLWGFFKRKFGTADSW 126
            V C YN LEYAW+ HE +  RYG     R L +GMNPGP+GM QTGVPFGEVD VRDWLG+   V KP+ EHPKR ++GF CKRSEVSG+RLWG F  +FG ADS+
Sbjct:   24 VACVYNPLEYAWQAHEAYLSRYGSGKK-RVLFLGMNPGPFGMAQTGVPFGEVDAVRDWLGICEDVEKPLKEHPKRPIEGFACKRSEVSGRRLWGLFAERFGKADSF 128

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BLAST of mRNA_C-tenellus_contig10042.3.1 vs. uniprot
Match: A0A2E8MC15_9BACT (Single-stranded DNA-binding protein n=2 Tax=Verrucomicrobiales TaxID=48461 RepID=A0A2E8MC15_9BACT)

HSP 1 Score: 150 bits (380), Expect = 3.730e-43
Identity = 65/106 (61.32%), Postives = 82/106 (77.36%), Query Frame = 0

Query:   21 VNCSYNVLEYAWEPHEDFTRRYGGRSLGRALLVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGSVGKPIVEHPKRLVQGFDCKRSEVSGKRLWGFFKRKFGTADSW 126
            V+C+YN LEYAW+ H D+  ++G     + L +GMNPGP+GM QTGVPFGE+ HVRDWLG+SG VGKP  EH KR + GFDC+RSEVSG+RLWG F   FGTA+++
Sbjct:   25 VSCTYNPLEYAWDRHCDYLTKFGSGQK-KVLFLGMNPGPYGMAQTGVPFGEIPHVRDWLGISGLVGKPDPEHKKRPITGFDCERSEVSGRRLWGLFAELFGTAETF 129

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BLAST of mRNA_C-tenellus_contig10042.3.1 vs. uniprot
Match: A0A1N7BSW3_9RHOO (Single-strand selective monofunctional uracil DNA glycosylase n=7 Tax=Rhodocyclales TaxID=206389 RepID=A0A1N7BSW3_9RHOO)

HSP 1 Score: 150 bits (379), Expect = 5.890e-43
Identity = 72/127 (56.69%), Postives = 92/127 (72.44%), Query Frame = 0

Query:    1 MYAFPHSVSDTEWHGSPKCAVNCSYNVLEYAWEPHEDFTRRYG-GRSLGRALLVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGSVGKPIVEHPKRLVQGFDCKRSEVSGKRLWGFFKRKFGTADSW 126
            + A   ++SDT         V+  YN L+YAW  HE + RRY  GR   R + +GMNPGP+GM QTGVPFGE+D VRDWLG++G VGKP VE+PKR V+GFDC RSEVSG+RLWG F+ +FGTA+++
Sbjct:    9 LIAAARALSDTLDAMRFAAPVSHVYNPLDYAWPIHEGYLRRYAAGRK--RIVFLGMNPGPFGMAQTGVPFGEIDAVRDWLGLAGPVGKPAVENPKRPVEGFDCARSEVSGRRLWGLFRERFGTAEAF 133

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BLAST of mRNA_C-tenellus_contig10042.3.1 vs. uniprot
Match: UPI0019031B84 (single-stranded DNA-binding protein n=1 Tax=Roseibacillus ishigakijimensis TaxID=454146 RepID=UPI0019031B84)

HSP 1 Score: 150 bits (378), Expect = 8.110e-43
Identity = 66/106 (62.26%), Postives = 81/106 (76.42%), Query Frame = 0

Query:   21 VNCSYNVLEYAWEPHEDFTRRYGGRSLGRALLVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGSVGKPIVEHPKRLVQGFDCKRSEVSGKRLWGFFKRKFGTADSW 126
            V  +YN LEYAW+ H D+ ++YG +   R L +GMNPGP+GM QTGVPFGE++HVRDW+G+SG V KP  EHPKR + GF C RSEVSG+RLWG F  KFGTAD +
Sbjct:   24 VAYTYNPLEYAWDRHCDYLQKYG-QGPKRVLFLGMNPGPYGMAQTGVPFGEIEHVRDWMGISGPVAKPQPEHPKRPITGFACPRSEVSGRRLWGLFAEKFGTADQF 128

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BLAST of mRNA_C-tenellus_contig10042.3.1 vs. uniprot
Match: A0A3R8ITW2_9BACT (Single-strand selective monofunctional uracil-DNA glycosylase n=2 Tax=Opitutaceae TaxID=134623 RepID=A0A3R8ITW2_9BACT)

HSP 1 Score: 150 bits (378), Expect = 9.310e-43
Identity = 66/102 (64.71%), Postives = 80/102 (78.43%), Query Frame = 0

Query:   25 YNVLEYAWEPHEDFTRRYGGRSLGRALLVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGSVGKPIVEHPKRLVQGFDCKRSEVSGKRLWGFFKRKFGTADSW 126
            Y  LEYAW PHE + RRYGG    R L +GMNPGP+GM QTGVPFGEV  VRDW+G+SG VG+P  EHPKR ++GF C +SEVSG+RLWG F +KFGTA+++
Sbjct:   31 YLPLEYAWAPHEQYLRRYGGGRK-RVLFLGMNPGPFGMAQTGVPFGEVAAVRDWMGISGPVGRPADEHPKRRIEGFACPKSEVSGRRLWGLFAQKFGTAEAF 131

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BLAST of mRNA_C-tenellus_contig10042.3.1 vs. uniprot
Match: UPI001F3FAAF7 (single-stranded DNA-binding protein n=1 Tax=Cognatazoarcus halotolerans TaxID=2686016 RepID=UPI001F3FAAF7)

HSP 1 Score: 149 bits (375), Expect = 2.860e-42
Identity = 64/106 (60.38%), Postives = 84/106 (79.25%), Query Frame = 0

Query:   21 VNCSYNVLEYAWEPHEDFTRRYGGRSLGRALLVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGSVGKPIVEHPKRLVQGFDCKRSEVSGKRLWGFFKRKFGTADSW 126
            V+  YN L+YAW P+E + RRYG  S  R + VGMNPGP+GMVQTGVPFGE+D VRDWLG+   VG+P+ E+PKR ++GFDC RSEVSG+RLWG F+ +FG+ +++
Sbjct:   34 VSHVYNPLDYAWAPNELYLRRYGA-SRKRVIFVGMNPGPFGMVQTGVPFGEIDTVRDWLGLEAEVGRPVTENPKRPIEGFDCTRSEVSGRRLWGLFRERFGSPEAF 138

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BLAST of mRNA_C-tenellus_contig10042.3.1 vs. uniprot
Match: H0Q2G0_9RHOO (Single-strand selective monofunctional uracil DNA glycosylase n=1 Tax=Azoarcus sp. KH32C TaxID=748247 RepID=H0Q2G0_9RHOO)

HSP 1 Score: 148 bits (374), Expect = 3.440e-42
Identity = 64/106 (60.38%), Postives = 85/106 (80.19%), Query Frame = 0

Query:   21 VNCSYNVLEYAWEPHEDFTRRYGGRSLGRALLVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGSVGKPIVEHPKRLVQGFDCKRSEVSGKRLWGFFKRKFGTADSW 126
            V+  YN L+YAW  HE++ RRYG     R + VGMNPGP+GMVQTGVPFGE++ VRDWLG++G VG+P VE+PKR ++GF C RSEVSG+RLWG F+ +FG+A+++
Sbjct:   29 VSHVYNPLDYAWNIHENYLRRYGAGKK-RVIFVGMNPGPFGMVQTGVPFGEIEAVRDWLGLTGPVGRPAVENPKRPIEGFACPRSEVSGRRLWGLFRERFGSAEAF 133

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BLAST of mRNA_C-tenellus_contig10042.3.1 vs. uniprot
Match: UPI0019034DE8 (single-stranded DNA-binding protein n=1 Tax=Luteolibacter pohnpeiensis TaxID=454153 RepID=UPI0019034DE8)

HSP 1 Score: 148 bits (373), Expect = 5.000e-42
Identity = 63/106 (59.43%), Postives = 83/106 (78.30%), Query Frame = 0

Query:   21 VNCSYNVLEYAWEPHEDFTRRYGGRSLGRALLVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGSVGKPIVEHPKRLVQGFDCKRSEVSGKRLWGFFKRKFGTADSW 126
            V  +Y  LEYAW+PHED+ +++G     R L +GMNPGP+GM QTGVPFGE+  V+DW+G+ G VGKP  EHPKR ++GF C+RSEVSG+RLWG F+ +FGTAD++
Sbjct:   27 VAYTYLPLEYAWKPHEDYLKKFGSGKK-RVLFLGMNPGPFGMAQTGVPFGEIAAVKDWMGIQGEVGKPAHEHPKRPIEGFACQRSEVSGRRLWGLFQDRFGTADAF 131

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BLAST of mRNA_C-tenellus_contig10042.3.1 vs. uniprot
Match: UPI00145ECE39 (single-stranded DNA-binding protein n=1 Tax=Aromatoleum diolicum TaxID=75796 RepID=UPI00145ECE39)

HSP 1 Score: 148 bits (373), Expect = 5.000e-42
Identity = 66/107 (61.68%), Postives = 85/107 (79.44%), Query Frame = 0

Query:   21 VNCSYNVLEYAWEPHEDFTRRYG-GRSLGRALLVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGSVGKPIVEHPKRLVQGFDCKRSEVSGKRLWGFFKRKFGTADSW 126
            V+  YN L+YAW  HE + RRYG GR   R + +GMNPGP+GM QTGVPFGE+D VRDWLG++G+VGKP  E+PKR V+GF C RSEVSG+RLWG F+ +FG+A+++
Sbjct:   29 VSHVYNPLDYAWAIHEHYLRRYGAGRK--RVVFIGMNPGPFGMAQTGVPFGEIDTVRDWLGLAGAVGKPATENPKRPVEGFACARSEVSGRRLWGLFRERFGSAEAF 133

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig10042.3.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig10042.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LKH1_ECTSI	2.630e-55	69.42	Uracil-DNA glycosylase superfamily protein n=2 Tax...	[more]
A0A2A2QJU9_9BACT	2.780e-43	64.15	Single-stranded DNA-binding protein n=1 Tax=Verruc...	[more]
A0A2E8MC15_9BACT	3.730e-43	61.32	Single-stranded DNA-binding protein n=2 Tax=Verruc...	[more]
A0A1N7BSW3_9RHOO	5.890e-43	56.69	Single-strand selective monofunctional uracil DNA ...	[more]
UPI0019031B84	8.110e-43	62.26	single-stranded DNA-binding protein n=1 Tax=Roseib...	[more]
A0A3R8ITW2_9BACT	9.310e-43	64.71	Single-strand selective monofunctional uracil-DNA ...	[more]
UPI001F3FAAF7	2.860e-42	60.38	single-stranded DNA-binding protein n=1 Tax=Cognat...	[more]
H0Q2G0_9RHOO	3.440e-42	60.38	Single-strand selective monofunctional uracil DNA ...	[more]
UPI0019034DE8	5.000e-42	59.43	single-stranded DNA-binding protein n=1 Tax=Luteol...	[more]
UPI00145ECE39	5.000e-42	61.68	single-stranded DNA-binding protein n=1 Tax=Aromat...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036895	Uracil-DNA glycosylase-like domain superfamily	GENE3D	3.40.470.10		coord: 8..131 e-value: 2.1E-47 score: 163.6
IPR036895	Uracil-DNA glycosylase-like domain superfamily	SUPERFAMILY	52141	Uracil-DNA glycosylase-like	coord: 17..129
IPR039134	Single-strand selective monofunctional uracil DNA glycosylase	PANTHER	PTHR13235	SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASE	coord: 22..124

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig10042	contig	C-tenellus_contig10042:3469..5040 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig10042.3.1	mRNA_C-tenellus_contig10042.3.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig10042 3290..5259 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig10042.3.1 ID=prot_C-tenellus_contig10042.3.1|Name=mRNA_C-tenellus_contig10042.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=135bp
MYAFPHSVSDTEWHGSPKCAVNCSYNVLEYAWEPHEDFTRRYGGRSLGRA
LLVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGSVGKPIVEHPKRLVQGF
DCKRSEVSGKRLWGFFKRKFGTADSWAGRSVDMS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036895	Uracil-DNA_glycosylase-like_sf
IPR039134	SMUG1