prot_C-tenellus_contig10005.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10005.2.1
Unique Nameprot_C-tenellus_contig10005.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length141
Homology
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BLAST of mRNA_C-tenellus_contig10005.2.1 vs. uniprot
Match: D8LS69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS69_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 2.960e-38
Identity = 74/142 (52.11%), Postives = 95/142 (66.90%), Query Frame = 0 
Query:    1 AIRSLIASHLRGLSPGSLSALARVSITSDEILRDSMSFFEVTTSAWDSTRVRVAIDGCNPFTAVLASFGALPTPSHHDVLAPAMLD--SNGTSCGVDIWTTVS-GREGTWFLAVVGGSPLHGLRYFAGPPDKLTFEVTTISE 139
            A+   +A    GL P  LS LA++++   ++ RD M +F+V T AW STRVRV+I+ C P TAV+A+FGA PTPS H++LA AM D   NGT CGVD+ T  S  R+G W  AVVGGSPL G RYFAGP D L F+   I++
Sbjct:   26 AVELTLADEAAGLEPSMLSPLAQLTLIDAQVERDDMYYFQVLTEAWQSTRVRVSIEDCTPRTAVIAAFGAEPTPSRHELLAHAMPDVAGNGT-CGVDVITRPSYSRDGVWHFAVVGGSPLRGDRYFAGPADTLAFQAAVIAD 166
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BLAST of mRNA_C-tenellus_contig10005.2.1 vs. uniprot
Match: A0A6H5JJD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJD0_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 3.760e-36
Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 0 
Query:    1 AIRSLIASHLRGLSPGSLSALARVSITSDEILRDSMSFFEVTTSAWDSTRVRVAIDGCNPFTAVLASFGALPTPSHHDVLAPAMLD--SNGTSCGVDIWTTVS-GREGTWFLAVVGGSPLHGLRYFAGPPDKLTFEVTTISE 139
            A+   +A    GL P  LS LA++++   ++ RD + +F+V T AW STRVRV+I+ C P TAV+A+FGA PTPS H++LA AM D   NGT CGVD+ T  S  R+G W  AVVGGSPL G RYFAGPPD L F+   I++
Sbjct:   26 AVEPTVADEAAGLEPSMLSPLAQLTLIDAQVERDDIHYFQVLTEAWQSTRVRVSIEDCTPRTAVIAAFGAEPTPSRHELLAHAMPDLAGNGT-CGVDVITRPSYSRDGVWHFAVVGGSPLRGDRYFAGPPDTLAFQAAVIAD 166
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10005.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LS69_ECTSI2.960e-3852.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJD0_9PHAE3.760e-3652.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10005contigC-tenellus_contig10005:3541..4559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10005.2.1mRNA_C-tenellus_contig10005.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10005 3541..4559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10005.2.1 ID=prot_C-tenellus_contig10005.2.1|Name=mRNA_C-tenellus_contig10005.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=141bp
AIRSLIASHLRGLSPGSLSALARVSITSDEILRDSMSFFEVTTSAWDSTR
VRVAIDGCNPFTAVLASFGALPTPSHHDVLAPAMLDSNGTSCGVDIWTTV
SGREGTWFLAVVGGSPLHGLRYFAGPPDKLTFEVTTISEV*
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