mRNA_C-tenellus_contig9987.4.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9987.4.1
Unique NamemRNA_C-tenellus_contig9987.4.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9987.4.1 vs. uniprot
Match: D7FQX4_ECTSI (ATP-binding cassette, sub-family D, member 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX4_ECTSI)

HSP 1 Score: 446 bits (1148), Expect = 2.250e-143
Identity = 234/397 (58.94%), Postives = 291/397 (73.30%), Query Frame = 1
Query:    1 KRERWSVLRDIAIAVRVFFWCGLFVNGQWRFPLLLACSAASYEVVASTVMNIIGDFYEAISSQDADLFVKQVLWRSLLVVTSVAFLKALRDLAEECCALQWRRDLVAFLHTWYLRGSTPYVLATAEWG---------------SALDDYHGRRCG-GRRSENKKVVVDNPDQRIVSDSTTLTTAFAKVAHDTMVIPGLVVYYTWYLLGMFGWTAPAACYLFFVLASLTNWVMVKKVVPAVYTQERAEGTYRYDHAWLRSNAESIAFYGPEAVEGREQERLGKSFAGVVRARWLVIRRHLPLYFTVQFFDYLGSIINYAAVGAAILYLSKASSMSEAEISSLVARGSYSCLYLINAFSQAFKASEAASRVGGSATRVVELLVGAGFTPEDSLALGPWS 1143
            +R   S + D+ + VRVF   GLFV  +W FPL+L  +A +YEV A++++N+I DFY AIS+ DA LFV QVLWRSLLVVT VA LKA RDLA+E CAL WR+ LV FLH+WYLRG  PYVL+T E G                 +D    R  G G  +  +  ++DNPDQR+ +D+  L  AFA V H+T+V PGLV +YTWYL+GMFGW AP ACY++F++AS  NW +VK VVPAVY +++AEGT+RYDHAWLR+++ES+ F G  AVEGRE++RLG+SF  VV A W VIRRH+PLY   QFFDYLGSI+NYAAVG AILYLSKA  M EAEI++LVARGS+SCLYLI+AFS+A +ASEAASR+GGSA RV ELL   G +  D+ A GPWS
Sbjct:   93 RRSPSSFVADLGMLVRVFLLRGLFVERRWVFPLILTVTATAYEVCAASILNVISDFYLAISTLDAQLFV-QVLWRSLLVVTVVAALKAGRDLAKEACALVWRQRLVLFLHSWYLRGKMPYVLSTGEAGRDKRGGASFGNVGAPGRVDGGCTRGGGNGVAAGGESPLIDNPDQRVTADAEALVAAFATVLHETLVAPGLVAFYTWYLVGMFGWVAPVACYVYFIVASAINWAVVKTVVPAVYWKDKAEGTFRYDHAWLRTHSESVVFCGVGAVEGRERDRLGESFNAVVTAWWEVIRRHVPLYLFTQFFDYLGSIVNYAAVGGAILYLSKAEGMGEAEIAALVARGSFSCLYLIDAFSKALRASEAASRMGGSARRVAELLRATGLSDSDARAFGPWS 488          
BLAST of mRNA_C-tenellus_contig9987.4.1 vs. uniprot
Match: A0A836CDC0_9STRA (ABC transporter transmembrane region 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDC0_9STRA)

HSP 1 Score: 379 bits (974), Expect = 2.520e-121
Identity = 205/380 (53.95%), Postives = 251/380 (66.05%), Query Frame = 1
Query:    1 KRERWSVLRDIAIAVRVFFWCGLFVNGQWRFPLLLACSAASYEVVASTVMNIIGDFYEAISSQDADLFVKQVLWRSLLVVTSVAFLKALRDLAEECCALQWRRDLVAFLHTWYLRGSTPYVLATAEWGSALDDYHGRRCGGRRSENKKVVVDNPDQRIVSDSTTLTTAFAKVAHDTMVIPGLVVYYTWYLLGMFGWTAPAACYLFFVLASLTNWVMVKKVVPAVYTQERAEGTYRYDHAWLRSNAESIAFYGPEAVEGREQERLGKSFAGVVRARWLVIRRHLPLYFTVQFFDYLGSIINYAAVGAAILYLSKASSMSEAEISSLVARGSYSCLYLINAFSQAFKASEAASRVGGSATRVVELLVGAGFTPEDSLALGPW 1140
            ++++W   R    A R+ FW GL  + +W  PLLL   A +YEV AS +M +IGDFY A+SSQD  LF+  VLWRS+LVV  V  L+A RD A E CALQWR +LV +LH  YLRG+ PY L  A                         VDNPDQRIVSD+  LTTA  +V   T+V+PGL+ YYTWY+  +FGW APAACY +F LA   N V++++VVP VY  ER EGT+RY HAWLR+NAE++AFYG  A    E+ RLG  F   V ARW V+  HLPLY  VQFFDY+GSI+NYAAVG +I YL+KA + SEAEISSL+ARGSYSCLY+INAFS    AS + + V  SA RV+ELL GAGFT   S  L P+
Sbjct:  129 EQQQWGTWRHAYEASRICFWHGLLRDRRWCLPLLLVTLAITYEVAASFIMTVIGDFYLAVSSQDWQLFMN-VLWRSMLVVAVVGTLRACRDFACEACALQWRCNLVRYLHAHYLRGTVPYQLTRAGXXXXXXXXXXXXXX--------XXVDNPDQRIVSDAAALTTAMGEVIQKTLVVPGLLAYYTWYVAALFGWVAPAACYAYFALAGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAERHRLGYYFNSAVDARWRVLWAHLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSMGLDASASLTVVRASAGRVMELLCGAGFTAAASAKLSPY 499          
BLAST of mRNA_C-tenellus_contig9987.4.1 vs. uniprot
Match: A0A6H5KJY9_9PHAE (ABC transmembrane type-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJY9_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 1.870e-66
Identity = 118/232 (50.86%), Postives = 152/232 (65.52%), Query Frame = 1
Query:   16 SVLRDIAIAVRVFFWCGLFVNGQWRFPLLLACSAASYEVVASTVMNIIGDFYEAISSQDADLFVK--------------QVLWRSLLVVTSVAFLKALRDLAEECCALQWRRDLVAFLHTWYLRGSTPYVLATAEWG-------SALDDYHGRRCGGR--RSENKKVVVDNPDQRIVSDSTTLTTAFAKVAHDTMVIPGLVVYYTWYLLGMFGWTAPAACYLFFVLASLTNW 642
            S   D+ + V+VF   GLFV  +W FPL+L  +A +YEV A++++++IGDFY AIS+ DA LFV+               VLWRSLLVVT VA LKA RDLA+E CAL WR+ LV FLH+WYLRG  PYVL+T E G       S   D  G R GG    +    +++DNPDQR+ +D+  L  AFA V H+T+V PGLV +YTWYL+ MFGW AP ACY++F++AS  NW
Sbjct:  100 SFFADLGMLVKVFLLRGLFVERRWVFPLILTVTATAYEVCAASILSVIGDFYLAISTLDAQLFVQAKIEQLFDYTLLIYHVLWRSLLVVTVVAALKAGRDLAKEACALVWRQRLVLFLHSWYLRGKMPYVLSTGEAGRDKRGAASFGVDGGGTRGGGDGVAAGGDSMLIDNPDQRVTADAEALVAAFATVLHETLVAPGLVAFYTWYLVSMFGWVAPVACYVYFIVASAINW 331          
BLAST of mRNA_C-tenellus_contig9987.4.1 vs. uniprot
Match: A0A6H5KC31_9PHAE (ABC transporter domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC31_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 7.710e-63
Identity = 115/171 (67.25%), Postives = 140/171 (81.87%), Query Frame = 1
Query:  631 LTNWVMVKKVVPAVYTQERAEGTYRYDHAWLRSNAESIAFYGPEAVEGREQERLGKSFAGVVRARWLVIRRHLPLYFTVQFFDYLGSIINYAAVGAAILYLSKASSMSEAEISSLVARGSYSCLYLINAFSQAFKASEAASRVGGSATRVVELLVGAGFTPEDSLALGPWS 1143
            L +W +VK VVPAVY +++AEGT+RYDHAWLR+++ES+ F G  AVEGRE++RLG+SF  VV A W +IRRH+PLY   QFFDYLGSI+NYAAVG AILYLSKA  M EAEI++LVARGS+SCLYLI+AFS+  +ASEAASR+GGSA RV ELL  AG +  D+ A GPWS
Sbjct:   21 LYSWAVVKTVVPAVYRKDKAEGTFRYDHAWLRTHSESVVFCGVGAVEGRERDRLGESFDVVVAAWWELIRRHVPLYLFTQFFDYLGSIVNYAAVGGAILYLSKAEGMGEAEIAALVARGSFSCLYLIDAFSKVLRASEAASRMGGSARRVAELLRAAGLSDSDARAFGPWS 191          
BLAST of mRNA_C-tenellus_contig9987.4.1 vs. uniprot
Match: E9HT79_DAPPU (ABC protein, subfamily ABCD n=4 Tax=Daphnia TaxID=6668 RepID=E9HT79_DAPPU)

HSP 1 Score: 147 bits (371), Expect = 1.140e-35
Identity = 116/372 (31.18%), Postives = 179/372 (48.12%), Query Frame = 1
Query:    4 RERWSVLRDIAIAVRVF--FWC--GLFVNGQWRFPL----LLACSAASYEVVASTVMNIIGDFYEAISSQDADLFVKQVLWRSLLVVTSVAFLKALRDLAEECCALQWRRDLVAFLHTWYLRGSTPYVLATAEWGSALDDYHGRRCGGRRSENKKVVVDNPDQRIVSDSTTLTTAFAKVAHDTMVIPGLVVYYTWYLLGMFGWTAPAACYLFFVLASLTNWVMVKKVVPAVYTQERAEGTYRYDHAWLRSNAESIAFY-GPEAVEGREQERLGKSFAGVVRARWLVIRRHLPLYFTVQFFDYLGSIINYAAVGAAILYLSKASSMSEAEISSLVARGSYSCLYLINAFSQAFKASEAASRVGGSATRVVELL 1092
            +E     RD    V  F  FW    L   G +  PL    LL   A   E +   V  I   FY+ +  +D   F+ Q L +S+ ++ +VA  KA++    +   L WR+ L   +H  Y  G   Y L      + LD +                VDNPDQRI +D   L   F+ VA   +V P  + YY++      GW  P +C+LFF++ ++ N +++  +V  V   ER EG +RY H  +RSNAES+AF  G    E +   +L      +++ +  +  R   L   V  FDYLGSII+Y A+   I +  +   +S AE+SSL+++ ++ C+YLI+ FS     S + +++ G   RV EL+
Sbjct:    4 KEEEDDARDHGFNVSFFRRFWRLQHLLFPGIFSLPLGLFALLLLVALLDEFIIYGVGLIPSGFYQVLGEKDFPGFINQTL-KSVGIILAVAVNKAVKTYISQILNLTWRQLLTRAVHRLYFTGINYYQL------NVLDKF----------------VDNPDQRITADINILCLVFSSVAIKVVVSPFTISYYSYKAYVGTGWVGPTSCFLFFIVGTVVNKLLMSPIVAWVVKNERREGDFRYKHMQIRSNAESLAFLTGARLEESKTNNKLDV----LLKTQHSLYGRQFFLNLAVNMFDYLGSIISYLALAVPI-FSGRYDDISPAELSSLISQNAFVCIYLISTFSTLVDLSSSVTQLAGVTHRVSELI 347          
BLAST of mRNA_C-tenellus_contig9987.4.1 vs. uniprot
Match: A0A165ABA9_9CRUS (ABC protein, subfamily ABCD n=3 Tax=Daphnia magna TaxID=35525 RepID=A0A165ABA9_9CRUS)

HSP 1 Score: 145 bits (365), Expect = 8.760e-35
Identity = 108/347 (31.12%), Postives = 168/347 (48.41%), Query Frame = 1
Query:   67 LFVNGQWRFPL----LLACSAASYEVVASTVMNIIGDFYEAISSQDADLFVKQVLWRSLLVVTSVAFLKALRDLAEECCALQWRRDLVAFLHTWYLRGSTPYVLATAEWGSALDDYHGRRCGGRRSENKKVVVDNPDQRIVSDSTTLTTAFAKVAHDTMVIPGLVVYYTWYLLGMFGWTAPAACYLFFVLASLTNWVMVKKVVPAVYTQERAEGTYRYDHAWLRSNAESIAFY-GPEAVEGREQERLGKSFAGVVRARWLVIRRHLPLYFTVQFFDYLGSIINYAAVGAAILYLSKASSMSEAEISSLVARGSYSCLYLINAFSQAFKASEAASRVGGSATRVVELL 1092
            L   G +  PL    LL   A   E +   V  I   FY+ +  +D   F+ Q L RS+ ++ +VA  KA++    +   L WR+ L   +H  Y      Y L      + LD +                VDNPDQRI +D   L   F+ VA   +V P  + YY++      GW  P +C+LFF++ +  N +++  +V  V   ER EG +RY H  +RSNAES+AF  G    E +   +L      ++  +  +  R   L   V  FDYLGSII+Y A+   I +  +   +S AE+S+L+++ ++ C+YLI+ FS     S + +++ G   RV EL+
Sbjct:   29 LLFPGVFSLPLGLFSLLLLVALLDEFIIYGVGLIPSGFYQVLGEKDLPGFINQTL-RSVGIILAVAVNKAIKTYISQVLNLTWRQLLTRAVHRLYFTDINYYQL------NVLDKF----------------VDNPDQRITADINILCLVFSSVAIKVVVSPFTIAYYSYKAYVGTGWVGPTSCFLFFIVGTFVNKLLMSPIVAWVVRNERREGDFRYKHMQIRSNAESLAFLTGARLEESKTNNKLDL----LLTTQHSLYGRQFFLNLAVNMFDYLGSIISYLALAVPI-FSGRYDGLSSAELSALISQNAFVCIYLISTFSTLVDLSSSVTQLAGVTHRVSELI 347          
BLAST of mRNA_C-tenellus_contig9987.4.1 vs. uniprot
Match: UPI0010FAABD5 (ATP-binding cassette sub-family D member 4 isoform X3 n=1 Tax=Scleropages formosus TaxID=113540 RepID=UPI0010FAABD5)

HSP 1 Score: 142 bits (357), Expect = 3.210e-34
Identity = 93/322 (28.88%), Postives = 159/322 (49.38%), Query Frame = 1
Query:  127 EVVASTVMNIIGDFYEAISSQDADLFVKQVLWRSLLVVTSVAFLKALRDLAEECCALQWRRDLVAFLHTWYLRGSTPYVLATAEWGSALDDYHGRRCGGRRSENKKVVVDNPDQRIVSDSTTLTTAFAKVAHDTMVIPGLVVYYTWYLLGMFGWTAPAACYLFFVLASLTNWVMVKKVVPAVYTQERAEGTYRYDHAWLRSNAESIAFYGPEAVEGREQERLGKSFAGVVRARWLVIRRHLPLYFTVQFFDYLGSIINYAAVGAAILYLSKASSMSEAEISSLVARGSYSCLYLINAFSQAFKASEAASRVGGSATRVVELL 1092
            ++V   V  I   FYE ++ QD + F   +L+  LL+V + + LK+L         + WR+ L  +LHT+Y +    Y L                         +  +DNPDQRI  D+  L    + +A   ++ P  + YYT+      GW  P + + +FV+ ++ N +++  +V  ++ QE+ EG +R+ H  +R NAES+AFY    VE    +R       ++R +  ++ +   LY  V  FDY+G  ++Y  +   I +    S ++ AE+S+L++R ++ C+YLIN F+Q    S   S V G   R+ EL+
Sbjct:   56 QLVIYQVGVIPSKFYEVLAGQDLEAFKTLLLFAGLLIVLN-SMLKSLDQFICSVMYVSWRKSLTEWLHTFYFQSRVYYTLNVL----------------------REDLDNPDQRISQDTERLCKQMSTMASRLILSPFTLAYYTYQCFRSTGWVGPTSIFGYFVVGTVVNKILMGPIVSTLFDQEKLEGNFRFKHMQIRVNAESVAFYRAGKVEHMRTDR---RLQELLRTQRSLMNKEFWLYIGVNTFDYVGGFLSYMVIAIPI-FTGVYSGLNPAELSALISRNAFVCIYLINCFTQLIDLSTTLSDVAGYTHRIGELM 350          
BLAST of mRNA_C-tenellus_contig9987.4.1 vs. uniprot
Match: A0A0P7TUM6_SCLFO (ATP-binding cassette sub-family D member 4-like n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7TUM6_SCLFO)

HSP 1 Score: 142 bits (357), Expect = 1.260e-33
Identity = 93/322 (28.88%), Postives = 159/322 (49.38%), Query Frame = 1
Query:  127 EVVASTVMNIIGDFYEAISSQDADLFVKQVLWRSLLVVTSVAFLKALRDLAEECCALQWRRDLVAFLHTWYLRGSTPYVLATAEWGSALDDYHGRRCGGRRSENKKVVVDNPDQRIVSDSTTLTTAFAKVAHDTMVIPGLVVYYTWYLLGMFGWTAPAACYLFFVLASLTNWVMVKKVVPAVYTQERAEGTYRYDHAWLRSNAESIAFYGPEAVEGREQERLGKSFAGVVRARWLVIRRHLPLYFTVQFFDYLGSIINYAAVGAAILYLSKASSMSEAEISSLVARGSYSCLYLINAFSQAFKASEAASRVGGSATRVVELL 1092
            ++V   V  I   FYE ++ QD + F   +L+  LL+V + + LK+L         + WR+ L  +LHT+Y +    Y L                         +  +DNPDQRI  D+  L    + +A   ++ P  + YYT+      GW  P + + +FV+ ++ N +++  +V  ++ QE+ EG +R+ H  +R NAES+AFY    VE    +R       ++R +  ++ +   LY  V  FDY+G  ++Y  +   I +    S ++ AE+S+L++R ++ C+YLIN F+Q    S   S V G   R+ EL+
Sbjct:   52 QLVIYQVGVIPSKFYEVLAGQDLEAFKTLLLFAGLLIVLN-SMLKSLDQFICSVMYVSWRKSLTEWLHTFYFQSRVYYTLNVL----------------------REDLDNPDQRISQDTERLCKQMSTMASRLILSPFTLAYYTYQCFRSTGWVGPTSIFGYFVVGTVVNKILMGPIVSTLFDQEKLEGNFRFKHMQIRVNAESVAFYRAGKVEHMRTDR---RLQELLRTQRSLMNKEFWLYIGVNTFDYVGGFLSYMVIAIPI-FTGVYSGLNPAELSALISRNAFVCIYLINCFTQLIDLSTTLSDVAGYTHRIGELM 346          
BLAST of mRNA_C-tenellus_contig9987.4.1 vs. uniprot
Match: A0A8C7MWM8_ONCKI (ATP-binding cassette, sub-family D (ALD), member 4 n=9 Tax=Oncorhynchus TaxID=8016 RepID=A0A8C7MWM8_ONCKI)

HSP 1 Score: 139 bits (351), Expect = 2.390e-33
Identity = 94/326 (28.83%), Postives = 164/326 (50.31%), Query Frame = 1
Query:  112 SAASYEVVASTVMNIIGDFYEAISSQDADLFVKQVLWRSLLVVTSVAFLKALRDLAEECCALQWRRDLVAFLHTWYLRGSTPYVLATAEWGSALDDYHGRRCGGRRSENKKVVVDNPDQRIVSDSTTLTTAFAKVAHDTMVIPGLVVYYTWYLLGMFGWTAPAACYLFFVLASLTNWVMVKKVVPAVYTQERAEGTYRYDHAWLRSNAESIAFYGPEAVEGREQERLGKSFAGVVRARWLVIRRHLPLYFTVQFFDYLGSIINYAAVGAAILYLSKASSMSEAEISSLVARGSYSCLYLINAFSQAFKASEAASRVGGSATRVVEL 1089
            S +S +++   V  I   FYEA+S +D   F K +   + L++   + LK++        ++ WR+ L   LH  Y +G+  Y L                         +  +DNPDQRI  D+  L    + +    ++ P  +VYYT+      GW  P + + +F++ ++TN +++  +V  ++ QE+ EG +R+ H  +RSNAES AFY    VE    +R  ++   ++R +  ++ + L LY  V  FDYLG I++Y  +   I +    +++S  E+S+L+++ ++ C+YLI+ FSQ    S   S V G   R+ EL
Sbjct:   10 SLSSEQMIIYQVGVIPSQFYEALSDKDYGAF-KNLAGLAFLLILLNSTLKSVDQYICSLMSVSWRKSLTESLHRAYFQGNVYYTLNVL----------------------REDIDNPDQRISQDTERLCKQMSTMVSRLIISPFTLVYYTYQCFYSTGWIGPVSIFGYFIVGTITNKILMGPIVSTLFEQEKLEGDFRFKHMQIRSNAESAAFYRAGKVEHMRTDRRLQT---LLRCQKSLMNKELWLYIGVNTFDYLGGILSYIIISIPI-FSGVYNNLSPGELSALISKNAFVCIYLISCFSQLIDLSTTLSDVAGYTHRIGEL 308          
BLAST of mRNA_C-tenellus_contig9987.4.1 vs. uniprot
Match: A0A8C9RDW3_SCLFO (ATP-binding cassette, sub-family D (ALD), member 4 n=8 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9RDW3_SCLFO)

HSP 1 Score: 140 bits (353), Expect = 3.680e-33
Identity = 92/322 (28.57%), Postives = 158/322 (49.07%), Query Frame = 1
Query:  127 EVVASTVMNIIGDFYEAISSQDADLFVKQVLWRSLLVVTSVAFLKALRDLAEECCALQWRRDLVAFLHTWYLRGSTPYVLATAEWGSALDDYHGRRCGGRRSENKKVVVDNPDQRIVSDSTTLTTAFAKVAHDTMVIPGLVVYYTWYLLGMFGWTAPAACYLFFVLASLTNWVMVKKVVPAVYTQERAEGTYRYDHAWLRSNAESIAFYGPEAVEGREQERLGKSFAGVVRARWLVIRRHLPLYFTVQFFDYLGSIINYAAVGAAILYLSKASSMSEAEISSLVARGSYSCLYLINAFSQAFKASEAASRVGGSATRVVELL 1092
            ++V   V  I   FYE ++ QD + F   +L+  LL+V + + LK+L         + WR+ L  +LHT+Y +    Y L                         +  +DNPDQRI  D+  L    + +A   ++ P  + YYT+      GW  P + + +FV+ ++ N +++  +V  ++ QE+ EG +R+ H  +R NAES+AFY        E  R  +    ++R +  ++ +   LY  V  FDY+G  ++Y  +   I +    S ++ AE+S+L++R ++ C+YLIN F+Q    S   S V G   R+ EL+
Sbjct:   56 QLVIYQVGVIPSKFYEVLAGQDLEAFKTLLLFAGLLIVLN-SMLKSLDQFICSVMYVSWRKSLTEWLHTFYFQSRVYYTLNVL----------------------REDLDNPDQRISQDTERLCKQMSTMASRLILSPFTLAYYTYQCFRSTGWVGPTSIFGYFVVGTVVNKILMGPIVSTLFDQEKLEGNFRFKHMQIRVNAESVAFYSRAGKV--EHMRTDRRLQELLRTQRSLMNKEFWLYIGVNTFDYVGGFLSYMVIAIPI-FTGVYSGLNPAELSALISRNAFVCIYLINCFTQLIDLSTTLSDVAGYTHRIGELM 351          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9987.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQX4_ECTSI2.250e-14358.94ATP-binding cassette, sub-family D, member 4 n=1 T... [more]
A0A836CDC0_9STRA2.520e-12153.95ABC transporter transmembrane region 2-domain-cont... [more]
A0A6H5KJY9_9PHAE1.870e-6650.86ABC transmembrane type-1 domain-containing protein... [more]
A0A6H5KC31_9PHAE7.710e-6367.25ABC transporter domain-containing protein n=1 Tax=... [more]
E9HT79_DAPPU1.140e-3531.18ABC protein, subfamily ABCD n=4 Tax=Daphnia TaxID=... [more]
A0A165ABA9_9CRUS8.760e-3531.12ABC protein, subfamily ABCD n=3 Tax=Daphnia magna ... [more]
UPI0010FAABD53.210e-3428.88ATP-binding cassette sub-family D member 4 isoform... [more]
A0A0P7TUM6_SCLFO1.260e-3328.88ATP-binding cassette sub-family D member 4-like n=... [more]
A0A8C7MWM8_ONCKI2.390e-3328.83ATP-binding cassette, sub-family D (ALD), member 4... [more]
A0A8C9RDW3_SCLFO3.680e-3328.57ATP-binding cassette, sub-family D (ALD), member 4... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9987contigC-tenellus_contig9987:1004..4382 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FQX4
Preferred nameABCD2
PFAMsABC_membrane_2,ABC_tran
Model size1143
Max annot lvl2759|Eukaryota
KEGG koko:K05675,ko:K05676,ko:K05677,ko:K05678,ko:K15628
KEGG TC3.A.1.203,3.A.1.203.1,3.A.1.203.2,3.A.1.203.3,3.A.1.203.6,3.A.1.203.7
KEGG Pathwayko02010,ko04146,map02010,map04146
Hectar predicted targeting categorysignal peptide
GOsGO:0000038,GO:0000166,GO:0001676,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005324,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005779,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006996,GO:0007031,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009605,GO:0009607,GO:0009617,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010565,GO:0010876,GO:0015399,GO:0015405,GO:0015711,GO:0015718,GO:0015849,GO:0015908,GO:0015909,GO:0015910,GO:0015919,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016054,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0019216,GO:0019217,GO:0019222,GO:0019395,GO:0019752,GO:0019899,GO:0022804,GO:0022857,GO:0030258,GO:0030554,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031903,GO:0031998,GO:0032000,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033036,GO:0033540,GO:0033559,GO:0034220,GO:0034440,GO:0035639,GO:0036094,GO:0036109,GO:0042579,GO:0042623,GO:0042626,GO:0042758,GO:0042760,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043492,GO:0043574,GO:0043651,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045834,GO:0045923,GO:0046320,GO:0046321,GO:0046395,GO:0046907,GO:0046942,GO:0046983,GO:0048471,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0050994,GO:0050996,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0055085,GO:0055114,GO:0062012,GO:0062013,GO:0065007,GO:0071702,GO:0071704,GO:0071840,GO:0072329,GO:0080090,GO:0097159,GO:0097367,GO:0098588,GO:0098656,GO:0098805,GO:1901265,GO:1901363,GO:1901575,GO:1902001,GO:1903825,GO:1905039
Exons6
Evalue3.7e-144
EggNOG OGsCOG4178@1|root,KOG0060@2759|Eukaryota,KOG0064@2759|Eukaryota
Descriptionlong-chain fatty acid transporter activity
Cds size1143
COG categoryGO
BRITEko00000,ko00001,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9987.4.1prot_C-tenellus_contig9987.4.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9987 1004..4382 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790210.1643379-CDS-C-tenellus_contig9987:1003..11201680790210.1643379-CDS-C-tenellus_contig9987:1003..1120Choristocarpus tenellus KU2346CDSC-tenellus_contig9987 1004..1120 -
1680790210.177984-CDS-C-tenellus_contig9987:1342..15441680790210.177984-CDS-C-tenellus_contig9987:1342..1544Choristocarpus tenellus KU2346CDSC-tenellus_contig9987 1343..1544 -
1680790210.1885848-CDS-C-tenellus_contig9987:2637..27801680790210.1885848-CDS-C-tenellus_contig9987:2637..2780Choristocarpus tenellus KU2346CDSC-tenellus_contig9987 2638..2780 -
1680790210.2055087-CDS-C-tenellus_contig9987:3315..35831680790210.2055087-CDS-C-tenellus_contig9987:3315..3583Choristocarpus tenellus KU2346CDSC-tenellus_contig9987 3316..3583 -
1680790210.2193336-CDS-C-tenellus_contig9987:3822..40251680790210.2193336-CDS-C-tenellus_contig9987:3822..4025Choristocarpus tenellus KU2346CDSC-tenellus_contig9987 3823..4025 -
1680790210.229612-CDS-C-tenellus_contig9987:4172..43821680790210.229612-CDS-C-tenellus_contig9987:4172..4382Choristocarpus tenellus KU2346CDSC-tenellus_contig9987 4173..4382 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9987.4.1

>prot_C-tenellus_contig9987.4.1 ID=prot_C-tenellus_contig9987.4.1|Name=mRNA_C-tenellus_contig9987.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=381bp
KRERWSVLRDIAIAVRVFFWCGLFVNGQWRFPLLLACSAASYEVVASTVM
NIIGDFYEAISSQDADLFVKQVLWRSLLVVTSVAFLKALRDLAEECCALQ
WRRDLVAFLHTWYLRGSTPYVLATAEWGSALDDYHGRRCGGRRSENKKVV
VDNPDQRIVSDSTTLTTAFAKVAHDTMVIPGLVVYYTWYLLGMFGWTAPA
ACYLFFVLASLTNWVMVKKVVPAVYTQERAEGTYRYDHAWLRSNAESIAF
YGPEAVEGREQERLGKSFAGVVRARWLVIRRHLPLYFTVQFFDYLGSIIN
YAAVGAAILYLSKASSMSEAEISSLVARGSYSCLYLINAFSQAFKASEAA
SRVGGSATRVVELLVGAGFTPEDSLALGPWS
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mRNA from alignment at C-tenellus_contig9987:1004..4382-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9987.4.1 ID=mRNA_C-tenellus_contig9987.4.1|Name=mRNA_C-tenellus_contig9987.4.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3379bp|location=Sequence derived from alignment at C-tenellus_contig9987:1004..4382- (Choristocarpus tenellus KU2346)
AAGAGAGAGAGGTGGTCAGTGTTAAGAGACATTGCTATTGCTGTGAGAGT GTTCTTCTGGTGTGGACTGTTTGTTAATGGGCAATGGAGATTCCCTCTTC TCCTCGCATGTAGTGCTGCAAGCTATGAGGTAGTCGCGTCGACCGTGATG AACATTATAGGAGACTTTTACGAGGCGATTTCTTCCCAGGACGCTGACCT CTTCGTCAAGGTAGGCAACAACACCAACCTCTCGCCAGCATGTCAGCAAG CTATCTGCAATCCCTCTCTCCCCAAAGTTCGTCGTATCTTATTCTTCATG TCCATACTTTTGGCTGCTGCATTGCCCTATTCATATCGATACACATCGTG CCTTTAGCAGGTGCTGTGGCGTTCCCTCTTGGTTGTTACTAGTGTTGCTT TTCTCAAAGCACTTCGGGACCTGGCGGAAGAATGCTGCGCACTGCAATGG CGAAGGGATCTGGTAGCCTTTTTACACACATGGTATCTCCGTGGCAGCAC CCCATATGTGCTTGCCACAGCAGAGTGGGGATCGGCTCTAGATGATTATC ATGGAAGACGGTGAGCACATTTTGGACTTGAGTGTGGAATTGAGCTTCAG CAATGTATGCCTTCTTAACCTTTTTGGATTGTTTATTCGGTGTGGATGAG GTATTATTGCAGATCTAGATCGGCCCTGCAGCAGTTACGAAAAATACTCG TACAACACGTCCATCCACAAGGATGGTTCCTCCAACTGTTGGAACGACTC TATACTCCTGATGCCGTTTCATTCCTTCCTCTCGCATTATGCTTCTTAGA TGCGGGGGACGTAGGAGTGAAAATAAAAAGGTGGTGGTTGACAATCCTGA CCAGCGGATTGTTTCAGACTCCACAACACTCACCACCGCCTTTGCCAAAG TGGCACACGACACAATGGTTATCCCCGGACTTGTGGTGTACTACACCTGG TACCTGCTAGGAATGTTTGGTTGGACGGCCCCTGCCGCTTGCTACCTCTT CTTTGTGCTTGCATCTCTTACGAACTGGGTAATGGTCAAGAAAGTCGTCC CTGCAGTGTACACCCAGGTGATGTTGGGATTGAATTTCCTGGTCGTCTTG CTGTTGACAATTAGGAGAGAAATATTTGTCGTCACTTTGGCATATGATGG TGTACATATGAGTTCAGTATTCTGGCAATGTATGTAAACTTTGTCGTATA TTTTTCCAGCTGCTCAACAACCACAGTTTCTTTTCTCAACAGAAAGTGCC GATTTCGCTTGTAGTTGGCAAGTCCGCAAACTAAGACTTCCCTATCTCAA GCAACGATTCTGCTTCTCTGCGATTTGGAGGGGGCTATCTATCTTCTGAA ACACTGACCACATTTTTTTGGTGTCAATGGCAAGACATTTATGGAACATA TTCGTGGACTCTTACGCTGCCACCTCAACCTCCTCGTCTTTCTATAGTCA CTTGTAGTTCAAGTATTGACAGTGATTTTTTCACATCAACAGTCCAGTTA TGAAGTCTTCCACAGTTATGTGCATGCGACCATGGGGTGAAATGTGATTG TGAATGAGTCTGTGTTCAAGTTTTGTACTCTTCTTCTCATTTCTTGTTGC AGGAAAGAGCAGAAGGAACCTACCGCTATGACCATGCTTGGCTCAGGTCC AATGCTGAGTCAATTGCTTTCTATGGACCGGAAGCTGTGGAGGGACGTGA GCAAGAGCGTTTGGGTAAAAGCTTCGCAGGTGTCGTCAGAGCAAGGTAAT ATAGCACCCAGTAGTGACTCGAGAGAGTGACTCGATTATTGGATTGATTT AGGAAAAAATTGTTCAAGGAGGGCTCAGCATTGTTGGCGGCATGCATTGG GATACCCTTGTTACCATTATGCAATGGATATTTGCCCCCTTGTATATCTG TGTGTGCCTGGTCAATATCTTTGTAATGAGACCTTGTTGTGCAGCCTAGG GGGTTGATAGGTTGTACTAATATCTGAAATTTGTTGGAGGTGTTTATTTT ATAGGGCTCTAGAGCACATTGAGCACTGGCTAAAATAGCATGCCTGCTAA GAAGATCAATCAAATGCATTTCTAGGTCATGTATCAACAGTACTTAGTAG TTATTCGACAACCTGTTATACTTCGGTATTGTCCTGTTGGGCGTGACAAG GCTCAATATCTCAACTCCAACTTTGCTGTACATACATATCAGTAGTATTA TGTTTGTGCCCTATGTTACAGTTGCTATGTGGGTCACAGACCAAAAACAT GGAATATCACCCTGCCGTTCAGCTGAGGTATCGAGTGCTGCCATAAATGT TCAGCAGCCAATTGAACCTAGATGACCCTATCACACTGAGGGGAGAGTTG GCCTCAGACCATCCCCAGTATGGATGGAATGAGTGACTGCAACTGACAAG ATAATTGGCAGTTGATTGGTCGTGTGCTGTGTATTTCGTTTTCAGTCTCC TTCATTCACCATTGGTTATGTGGGACTTGTAAGTATCATGTAGATTGTAT GTGTATCTCTCATAACTTCTTTGCAATAGAGTCTTGAGCGGCTGGACACA TTGGCTTCCTGCTCCTTCCCGTAGTTGACCAGGTTCCTGTAACCTTGTCT TTTTTTTTCCTTGGAAGGGGTGGTTAATGAGCTTTGTTGTGCTATGGGTG TGCTGGTGTGTTTATGTGTAGAACATGGATGGTACTGCGCCATTCCACGA TATGATATTCCCAAAGAAAAGTGCCACCACGAGCTACTTTTGCTCAGTTT GAAAAATTGTCTTATGCAATGGTTAATGTAGCGGCACCTGCTTCACTTGC TGTACACTCTTAACCATGTTCCTCGACCTTGTGTTCAGGTGGCTTGTCAT CCGACGCCACCTTCCGCTCTACTTTACGGTTCAGTTCTTTGATTACCTTG GATCGATTATCAACTATGCAGCTGTGGGTGCTGCTATACTTTACCTTTCC AAGGCCAGCAGTATGTCAGAGGCAGAGATATCATCCCTGGTGGCCCGTGG CAGCTACAGCTGCCTCTATCTTATCAATGCATTCTCACAGGTTTGTGGCC ATCATCAACAAGTCCTCCAAAGTGCAATCTCTGGATAGCAACATCAAATT GTATGCCACTTGTCCCTTGAGTTCTTGCTGATGGAGTGAGTGATTTTTAG TGTATCCATGATATCAATGTTGTTAAGTCCCACTGTCTGTGCTCCCTCCC TTTTTGAAGATATGGTAATATGTACATGCTCAACACATGTCAATGGGCTT ATGTTGTACCAGGCATTCAAAGCATCTGAGGCAGCAAGCAGGGTTGGTGG CAGCGCAACCCGAGTGGTGGAACTACTGGTGGGTGCTGGTTTCACACCAG AGGATTCTCTTGCCCTTGGACCCTGGTCC
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Coding sequence (CDS) from alignment at C-tenellus_contig9987:1004..4382-

>mRNA_C-tenellus_contig9987.4.1 ID=mRNA_C-tenellus_contig9987.4.1|Name=mRNA_C-tenellus_contig9987.4.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1143bp|location=Sequence derived from alignment at C-tenellus_contig9987:1004..4382- (Choristocarpus tenellus KU2346)
AAGAGAGAGAGGTGGTCAGTGTTAAGAGACATTGCTATTGCTGTGAGAGT
GTTCTTCTGGTGTGGACTGTTTGTTAATGGGCAATGGAGATTCCCTCTTC
TCCTCGCATGTAGTGCTGCAAGCTATGAGGTAGTCGCGTCGACCGTGATG
AACATTATAGGAGACTTTTACGAGGCGATTTCTTCCCAGGACGCTGACCT
CTTCGTCAAGCAGGTGCTGTGGCGTTCCCTCTTGGTTGTTACTAGTGTTG
CTTTTCTCAAAGCACTTCGGGACCTGGCGGAAGAATGCTGCGCACTGCAA
TGGCGAAGGGATCTGGTAGCCTTTTTACACACATGGTATCTCCGTGGCAG
CACCCCATATGTGCTTGCCACAGCAGAGTGGGGATCGGCTCTAGATGATT
ATCATGGAAGACGATGCGGGGGACGTAGGAGTGAAAATAAAAAGGTGGTG
GTTGACAATCCTGACCAGCGGATTGTTTCAGACTCCACAACACTCACCAC
CGCCTTTGCCAAAGTGGCACACGACACAATGGTTATCCCCGGACTTGTGG
TGTACTACACCTGGTACCTGCTAGGAATGTTTGGTTGGACGGCCCCTGCC
GCTTGCTACCTCTTCTTTGTGCTTGCATCTCTTACGAACTGGGTAATGGT
CAAGAAAGTCGTCCCTGCAGTGTACACCCAGGAAAGAGCAGAAGGAACCT
ACCGCTATGACCATGCTTGGCTCAGGTCCAATGCTGAGTCAATTGCTTTC
TATGGACCGGAAGCTGTGGAGGGACGTGAGCAAGAGCGTTTGGGTAAAAG
CTTCGCAGGTGTCGTCAGAGCAAGGTGGCTTGTCATCCGACGCCACCTTC
CGCTCTACTTTACGGTTCAGTTCTTTGATTACCTTGGATCGATTATCAAC
TATGCAGCTGTGGGTGCTGCTATACTTTACCTTTCCAAGGCCAGCAGTAT
GTCAGAGGCAGAGATATCATCCCTGGTGGCCCGTGGCAGCTACAGCTGCC
TCTATCTTATCAATGCATTCTCACAGGCATTCAAAGCATCTGAGGCAGCA
AGCAGGGTTGGTGGCAGCGCAACCCGAGTGGTGGAACTACTGGTGGGTGC
TGGTTTCACACCAGAGGATTCTCTTGCCCTTGGACCCTGGTCC
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