mRNA_C-tenellus_contig9984.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9984.1.1 vs. uniprot
Match: A0A6H5K5Z3_9PHAE (MSP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Z3_9PHAE) HSP 1 Score: 157 bits (396), Expect = 7.820e-42 Identity = 70/104 (67.31%), Postives = 86/104 (82.69%), Query Frame = 1 Query: 79 LQVTIFFRPDTAVEYSSRAFLDCVGREERLPLLLSAGGIGPKVVLSFDVLDMGDIFISSRHKYELTLMNKGEIAAEWSLSAPSTPFAEKFTFSPTYGKLDIKNR 390 ++VT+FFRP T EY S AFLDC+GREERLPL L GIGPKVVLSFDVLDMGD+FI+SRH +++TL+N+G+IAA+W+L AP TPFA KF F P G LD+K+R Sbjct: 479 IEVTVFFRPRTTTEYGSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHQVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDR 582
BLAST of mRNA_C-tenellus_contig9984.1.1 vs. uniprot
Match: D7FJY6_ECTSI (Hydrocephalus-inducing protein, Hydin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJY6_ECTSI) HSP 1 Score: 155 bits (391), Expect = 3.680e-41 Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 1 Query: 79 LQVTIFFRPDTAVEYSSRAFLDCVGREERLPLLLSAGGIGPKVVLSFDVLDMGDIFISSRHKYELTLMNKGEIAAEWSLSAPSTPFAEKFTFSPTYGKLDIKN 387 ++VT+FFRP T EY S AFLDC+GREERLPL L GIGPKVVLSFDVLDMGD+FI+SRH +E+TL+N+G+IAA+W+L AP TPF+ KF F P G LD+K+ Sbjct: 539 IEVTVFFRPRTTTEYGSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFSRKFRFGPMKGTLDVKD 641
BLAST of mRNA_C-tenellus_contig9984.1.1 vs. uniprot
Match: F0Y448_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y448_AURAN) HSP 1 Score: 114 bits (285), Expect = 7.070e-27 Identity = 56/101 (55.45%), Postives = 73/101 (72.28%), Query Frame = 1 Query: 79 LQVTIFFRPDTAVEYSSRAFLDCVGREERLPLLLSAGGIGPKVVLSFDVLDMGDIFISSRHKYELTLMNKGEIAAEWSLSAPSTPFAEKFTFSPTYGKLDI 381 ++V++ FRPDTA +Y+ A+LD +GREERLP+ L+ GIGPK LS+DVLDMGD+FISS ++Y L + NKG+I AEW L P T F FSPT G L + Sbjct: 408 IEVSVTFRPDTAADYACTAYLDVMGREERLPIWLTGLGIGPKGALSYDVLDMGDVFISSPYEYSLGITNKGDIPAEWKLFPPPTT---TFQFSPTSGVLAV 505
BLAST of mRNA_C-tenellus_contig9984.1.1 vs. uniprot
Match: A0A482SNA2_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNA2_9ARCH) HSP 1 Score: 112 bits (280), Expect = 3.300e-26 Identity = 54/98 (55.10%), Postives = 68/98 (69.39%), Query Frame = 1 Query: 82 QVTIFFRPDTAVEYSSRAFLDCVGREERLPLLLSAGGIGPKVVLSFDVLDMGDIFISSRHKYELTLMNKGEIAAEWSLSAPSTPFAEKFTFSPTYGKL 375 +VTI FRPDTA Y+ AFLD GR +RLPL L+ GIGP LSFDVLD+GD+F++ YEL++ NKG+I A+W+ + T F KF FSPT G L Sbjct: 331 EVTIVFRPDTAALYNCLAFLDVSGRHDRLPLQLTGQGIGPHAALSFDVLDIGDVFVNDVSTYELSIKNKGDIPAQWTFMSSLTKFGNKFQFSPTDGYL 428
BLAST of mRNA_C-tenellus_contig9984.1.1 vs. uniprot
Match: A0A8J1XSC2_OWEFU (Ofus.G062473 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XSC2_OWEFU) HSP 1 Score: 106 bits (264), Expect = 4.750e-24 Identity = 52/97 (53.61%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 79 LQVTIFFRPDTAVEYSSRAFLDCVGREERLPLLLSAGGIGPKVVLSFDVLDMGDIFISSRHKYELTLMNKGEIAAEWSLSAPSTPFAEKFTFSPTYG 369 L+VT+ F+PD A Y+ A+ D VGRE RLPL + GIGPKV SFD LDMG+IFISS H YE+ L NKG+I A +SL ++ F +F+F+P+ G Sbjct: 445 LEVTVIFKPDEAKTYTRTAYCDIVGRETRLPLRIKGDGIGPKVQFSFDSLDMGNIFISSSHAYEVVLANKGDIDAMFSLLPNNSVFGPRFSFNPSEG 541
BLAST of mRNA_C-tenellus_contig9984.1.1 vs. uniprot
Match: A0A8J1XSX0_OWEFU (Ofus.G062473 protein n=2 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XSX0_OWEFU) HSP 1 Score: 106 bits (264), Expect = 4.780e-24 Identity = 52/97 (53.61%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 79 LQVTIFFRPDTAVEYSSRAFLDCVGREERLPLLLSAGGIGPKVVLSFDVLDMGDIFISSRHKYELTLMNKGEIAAEWSLSAPSTPFAEKFTFSPTYG 369 L+VT+ F+PD A Y+ A+ D VGRE RLPL + GIGPKV SFD LDMG+IFISS H YE+ L NKG+I A +SL ++ F +F+F+P+ G Sbjct: 420 LEVTVIFKPDEAKTYTRTAYCDIVGRETRLPLRIKGDGIGPKVQFSFDSLDMGNIFISSSHAYEVVLANKGDIDAMFSLLPNNSVFGPRFSFNPSEG 516
BLAST of mRNA_C-tenellus_contig9984.1.1 vs. uniprot
Match: A0A8J2SKS6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKS6_9STRA) HSP 1 Score: 103 bits (256), Expect = 5.710e-23 Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 79 LQVTIFFRPDTAVEYSSRAFLDCVGREERLPLLLSAGGIGPKVVLSFDVLDMGDIFISSRHKYELTLMNKGEIAAEWSLSAPSTPFAEKFTFSPTYGKLDI 381 + + + FRPDTA +Y+ A+LD VGREERLP+ L+ GIGPK LS+DVLD+GD+F+ + Y L++ NKG+I A W L+ P + + F PT G L + Sbjct: 391 VDIHVMFRPDTAADYACTAYLDVVGREERLPVWLTGIGIGPKGALSYDVLDLGDVFVGHPYSYTLSIDNKGDIPAAWRLNPPES---DAFVVEPTQGTLAV 488
BLAST of mRNA_C-tenellus_contig9984.1.1 vs. uniprot
Match: A0A8J1ZKQ1_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1ZKQ1_9DINO) HSP 1 Score: 103 bits (256), Expect = 5.720e-23 Identity = 44/101 (43.56%), Postives = 70/101 (69.31%), Query Frame = 1 Query: 79 LQVTIFFRPDTAVEYSSRAFLDCVGREERLPLLLSAGGIGPKVVLSFDVLDMGDIFISSRHKYELTLMNKGEIAAEWSLSAPSTPFAEKFTFSPTYGKLDI 381 L VTI F P +A+ Y A+ VG++ER+P+ L+ GIGPK S+D +D+GDIF+ S H+YE+ ++N+G+IA + L ++PF KF+F+P G+L++ Sbjct: 429 LTVTISFSPKSALHYHCLAYCSIVGQQERIPVKLTGHGIGPKAAFSYDEMDVGDIFVESMHRYEVDIVNQGDIAVNYELIPNTSPFGSKFSFTPASGRLEV 529
BLAST of mRNA_C-tenellus_contig9984.1.1 vs. uniprot
Match: A0A0G4EW24_VITBC (Uncharacterized protein n=11 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EW24_VITBC) HSP 1 Score: 102 bits (255), Expect = 7.810e-23 Identity = 49/102 (48.04%), Postives = 67/102 (65.69%), Query Frame = 1 Query: 76 SLQVTIFFRPDTAVEYSSRAFLDCVGREERLPLLLSAGGIGPKVVLSFDVLDMGDIFISSRHKYELTLMNKGEIAAEWSLSAPSTPFAEKFTFSPTYGKLDI 381 S VT+ F P A+ Y A+ D VG ER+PLLL GIGPK S+D LD+GD+FI S+HKYE+ L+++G+IA +SL T F KF F+P G+L++ Sbjct: 482 SCTVTVSFSPKAALCYQCLAYCDIVGCGERVPLLLKGQGIGPKATFSYDELDVGDLFIGSKHKYEVDLISRGDIAVNYSLQPLETAFGPKFRFTPDSGRLEV 583
BLAST of mRNA_C-tenellus_contig9984.1.1 vs. uniprot
Match: A0A8J1Z3W3_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1Z3W3_9DINO) HSP 1 Score: 102 bits (254), Expect = 1.060e-22 Identity = 43/99 (43.43%), Postives = 68/99 (68.69%), Query Frame = 1 Query: 85 VTIFFRPDTAVEYSSRAFLDCVGREERLPLLLSAGGIGPKVVLSFDVLDMGDIFISSRHKYELTLMNKGEIAAEWSLSAPSTPFAEKFTFSPTYGKLDI 381 VTI F P +A+ Y A+ G++ER+P+ L+ GIGPK SFD +D+GDIF+ S H+YE+ ++N+G+IA + L ++PF KF+F+P G+L++ Sbjct: 454 VTISFSPKSALHYHCLAYCSIAGQQERIPIKLTGHGIGPKAAFSFDEMDVGDIFVESMHRYEVDIVNQGDIAVNYELMPNTSPFGSKFSFTPASGRLEV 552 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9984.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9984.1.1 >prot_C-tenellus_contig9984.1.1 ID=prot_C-tenellus_contig9984.1.1|Name=mRNA_C-tenellus_contig9984.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=131bp HSIFYISLSSVAKVMSPYSSSTTFFSLQVTIFFRPDTAVEYSSRAFLDCVback to top mRNA from alignment at C-tenellus_contig9984:1987..3065+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9984.1.1 ID=mRNA_C-tenellus_contig9984.1.1|Name=mRNA_C-tenellus_contig9984.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1079bp|location=Sequence derived from alignment at C-tenellus_contig9984:1987..3065+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9984:1987..3065+ >mRNA_C-tenellus_contig9984.1.1 ID=mRNA_C-tenellus_contig9984.1.1|Name=mRNA_C-tenellus_contig9984.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=393bp|location=Sequence derived from alignment at C-tenellus_contig9984:1987..3065+ (Choristocarpus tenellus KU2346)back to top |