mRNA_C-tenellus_contig9895.1.4 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9895.1.4 vs. uniprot
Match: D7G294_ECTSI (18S rRNA aminocarboxypropyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G294_ECTSI) HSP 1 Score: 184 bits (468), Expect = 1.010e-49 Identity = 92/118 (77.97%), Postives = 105/118 (88.98%), Query Frame = 1 Query: 1 QMRKGHHRLLPFLVAANPVNYGRPFKLSCAEAIAATLYIVGHQARLEEAVELMGCFGWGPEFLRINAEVLETYAACANGAEVVKAQEAFLARCQSEAVARREDVSLEDMMPPSYSDIE 354 QMR+GHHRLLPFLVAANPVNYG+P KL+CAEAIAATLYIVGHQ +EAV++M FGWG EFLR+N +VLETYAACA+GAEVVKAQ AFLARC+ EA +RR+ VS+EDMMPPSYSD E Sbjct: 155 QMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQ---DEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSRRDAVSMEDMMPPSYSDEE 269
BLAST of mRNA_C-tenellus_contig9895.1.4 vs. uniprot
Match: A0A835YJ70_9STRA (18S rRNA aminocarboxypropyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ70_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.820e-38 Identity = 81/127 (63.78%), Postives = 102/127 (80.31%), Query Frame = 1 Query: 1 QMRKGHHRLLPFLVAANPVNYGRPFKLSCAEAIAATLYIVGHQARLEEAVELMGCFGWGPEFLRINAEVLETYAACANGAEVVKAQEAFLARCQSEAVARREDVSLEDMMPPSY-SDIEGEEEEDRG 378 QMR+GHHRLLPFLVAANPVNYG+PFKL+CAEA+AATL IVG + E+ +M FGWGPEFL+INA+VL+ YAAC++GAEV+ AQ A+LA+C++EA ARR +DM+PP+Y S EGE E + G Sbjct: 154 QMRRGHHRLLPFLVAANPVNYGKPFKLTCAEALAATLVIVGLR---EQGALVMDQFGWGPEFLKINADVLDRYAACSSGAEVITAQAAYLAQCEAEAAARRRP---DDMLPPAYDSSDEGESEGEGG 274
BLAST of mRNA_C-tenellus_contig9895.1.4 vs. uniprot
Match: A0A329RNH6_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RNH6_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.870e-32 Identity = 77/122 (63.11%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 1 QMRKGHHRLLPFLVAANPVNYGRPFKLSCAEAIAATLYIVGHQARLEEAVELMGCFGWGPEFLRINAEVLETYAACANGAEVVKAQEAFLARCQSEAVARREDVSLEDMMPPSYSDIEGEEE 366 Q+R G HRLLPFLVAAN VNYGRP KLSC+EAIAATLYIVG + EEAV+LM F WGPEFL+INA+ LE YAAC N +VV+AQ A+LA CQ+E R ++L P SD E EEE Sbjct: 117 QLRSGVHRLLPFLVAANSVNYGRPHKLSCSEAIAATLYIVGLK---EEAVQLMDEFTWGPEFLKINADCLEAYAACENSEQVVEAQNAYLAACQTEHEQRLLRMNL----PTVESDEESEEE 231
BLAST of mRNA_C-tenellus_contig9895.1.4 vs. uniprot
Match: A0A024UTD3_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTD3_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.530e-31 Identity = 76/130 (58.46%), Postives = 92/130 (70.77%), Query Frame = 1 Query: 1 QMRKGHHRLLPFLVAANPVNYGRPFKLSCAEAIAATLYIVGHQARLEEAVELMGCFGWGPEFLRINAEVLETYAACANGAEVVKAQEAFLARCQSEAVARREDVSLEDMMPPSYSDIEGEEEEDRGMEAE 390 Q+ G HRLLPFLVAAN VNYG+P KLSC EAIAATLYIVG +EAV+LM F WG EFL+INA+VL+ YAAC + EVV AQ+A+LA CQ+E RR + L P+ SD EG +E++ EAE Sbjct: 141 QINSGTHRLLPFLVAANTVNYGKPHKLSCVEAIAATLYIVG---LADEAVQLMDEFPWGMEFLKINADVLDAYAACESSDEVVAAQDAYLASCQAEVDDRRNRLDL-----PALSDEEGSDEDEEAAEAE 262
BLAST of mRNA_C-tenellus_contig9895.1.4 vs. uniprot
Match: A0A3M6VVZ0_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVZ0_9STRA) HSP 1 Score: 134 bits (338), Expect = 6.580e-31 Identity = 69/106 (65.09%), Postives = 83/106 (78.30%), Query Frame = 1 Query: 1 QMRKGHHRLLPFLVAANPVNYGRPFKLSCAEAIAATLYIVGHQARLEEAVELMGCFGWGPEFLRINAEVLETYAACANGAEVVKAQEAFLARCQSEAVARREDVSL 318 Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG Q +EA+++M F WG EFL+INA+ L+ YAAC N AEVV+AQ A+LA CQ+E R++ + L Sbjct: 122 QLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLQ---DEAIQVMDEFSWGAEFLKINADCLQAYAACTNSAEVVEAQNAYLAACQTEQKERQQHMDL 224
BLAST of mRNA_C-tenellus_contig9895.1.4 vs. uniprot
Match: A0A484EFG2_BRELC (18S rRNA aminocarboxypropyltransferase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFG2_BRELC) HSP 1 Score: 135 bits (340), Expect = 7.690e-31 Identity = 76/131 (58.02%), Postives = 94/131 (71.76%), Query Frame = 1 Query: 1 QMRKGHHRLLPFLVAANPVNYGRPFKLSCAEAIAATLYIVGHQARLEEAVELMGCFGWGPEFLRINAEVLETYAACANGAEVVKAQEAFLARCQSEAVARREDVSLEDMMPPSYSDIEGEEEEDRGMEAER 393 Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG + +EAV+++ F WG EFL+INA+ L Y+ C N EVV+AQEA+LA C+SE R + ++L P SD EGEE E+ +E +R Sbjct: 116 QLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLK---QEAVQVVDEFSWGAEFLKINADCLNAYSVCKNSDEVVEAQEAYLAACRSEHQERLQKLNL----PSLASDDEGEEGEEETLELDR 239
BLAST of mRNA_C-tenellus_contig9895.1.4 vs. uniprot
Match: G4ZJA7_PHYSP (18S rRNA aminocarboxypropyltransferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJA7_PHYSP) HSP 1 Score: 132 bits (332), Expect = 2.150e-30 Identity = 74/113 (65.49%), Postives = 85/113 (75.22%), Query Frame = 1 Query: 1 QMRKGHHRLLPFLVAANPVNYGRPFKLSCAEAIAATLYIVGHQARLEEAVELMGCFGWGPEFLRINAEVLETYAACANGAEVVKAQEAFLARCQSEAVARREDVSLEDMMPPS 339 Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG + +EAV+LM F WG EFL+INA+ LE YAAC + A+VV AQEA+LA CQ+E R L+ MM PS Sbjct: 122 QLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLK---DEAVQLMDEFSWGAEFLKINADCLEAYAACEDSAQVVAAQEAYLAACQAENEQR-----LQRMMLPS 226
BLAST of mRNA_C-tenellus_contig9895.1.4 vs. uniprot
Match: D0P2X0_PHYIT (18S rRNA aminocarboxypropyltransferase n=11 Tax=Phytophthora TaxID=4783 RepID=D0P2X0_PHYIT) HSP 1 Score: 131 bits (329), Expect = 4.010e-30 Identity = 67/106 (63.21%), Postives = 82/106 (77.36%), Query Frame = 1 Query: 1 QMRKGHHRLLPFLVAANPVNYGRPFKLSCAEAIAATLYIVGHQARLEEAVELMGCFGWGPEFLRINAEVLETYAACANGAEVVKAQEAFLARCQSEAVARREDVSL 318 Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG + +EA +LM F WG EFL+INA+ LE Y+AC N EVV+AQ+A+L CQ+E + R + ++L Sbjct: 79 QLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLK---QEATQLMDEFSWGAEFLKINADCLEAYSACTNSTEVVEAQDAYLTACQTEHMERLQRINL 181
BLAST of mRNA_C-tenellus_contig9895.1.4 vs. uniprot
Match: A0A6A3KBB7_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KBB7_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.560e-29 Identity = 70/106 (66.04%), Postives = 81/106 (76.42%), Query Frame = 1 Query: 1 QMRKGHHRLLPFLVAANPVNYGRPFKLSCAEAIAATLYIVGHQARLEEAVELMGCFGWGPEFLRINAEVLETYAACANGAEVVKAQEAFLARCQSEAVARREDVSL 318 Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG + +EAV+LM F WG EFL+INA+ LE YAAC N AEVV+AQ A+L CQ+E R + + L Sbjct: 122 QVRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLK---DEAVQLMDEFSWGAEFLKINADCLEAYAACENSAEVVEAQTAYLTACQTEHEQRMQRMLL 224
BLAST of mRNA_C-tenellus_contig9895.1.4 vs. uniprot
Match: M4BTS6_HYAAE (18S rRNA aminocarboxypropyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BTS6_HYAAE) HSP 1 Score: 130 bits (326), Expect = 2.570e-29 Identity = 69/106 (65.09%), Postives = 80/106 (75.47%), Query Frame = 1 Query: 1 QMRKGHHRLLPFLVAANPVNYGRPFKLSCAEAIAATLYIVGHQARLEEAVELMGCFGWGPEFLRINAEVLETYAACANGAEVVKAQEAFLARCQSEAVARREDVSL 318 Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG Q +EA ++M F WG EFL+INA+ L YAAC N A+VVKAQ +LA CQSE R++ + L Sbjct: 122 QLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGCQ---DEARQVMDEFSWGAEFLKINADCLAAYAACENSAQVVKAQNDYLAACQSEHKERQQQMKL 224 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9895.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9895.1.4 >prot_C-tenellus_contig9895.1.4 ID=prot_C-tenellus_contig9895.1.4|Name=mRNA_C-tenellus_contig9895.1.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=204bp MRKGHHRLLPFLVAANPVNYGRPFKLSCAEAIAATLYIVGHQARLEEAVEback to top mRNA from alignment at C-tenellus_contig9895:255..3186+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9895.1.4 ID=mRNA_C-tenellus_contig9895.1.4|Name=mRNA_C-tenellus_contig9895.1.4|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2932bp|location=Sequence derived from alignment at C-tenellus_contig9895:255..3186+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9895:255..3186+ >mRNA_C-tenellus_contig9895.1.4 ID=mRNA_C-tenellus_contig9895.1.4|Name=mRNA_C-tenellus_contig9895.1.4|organism=Choristocarpus tenellus KU2346|type=CDS|length=612bp|location=Sequence derived from alignment at C-tenellus_contig9895:255..3186+ (Choristocarpus tenellus KU2346)back to top |