mRNA_C-tenellus_contig9867.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9867.1.1 vs. uniprot
Match: D7FVH6_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVH6_ECTSI) HSP 1 Score: 101 bits (251), Expect = 2.670e-19 Identity = 72/187 (38.50%), Postives = 96/187 (51.34%), Query Frame = 3 Query: 468 SSTELFVHARNEYGASDPVALALYGYELLVEPYRETTLSVEFSDSVTAVMRESHPYFHWYLALADDDGSVIDGVEPEL----DGEYGAEVLVTLKDPGSVYRLTVSEVFSDKSGGFRRTDVAQVPTSVSLLVTCKYVRRELRQLTDQDLDDFMHAMSVFYDVAESDSPANYGPDFITAKDMVALHSS 1016 SS+ L + A NEYG D ALALYG+++LVEPY++TT+SV S + + S W L DDD + VE E+ D G+ V VTL + G+ Y L V + GG VA V + ++ V CK+VRRELR LT D F AM FY V YG F +K + H++ Sbjct: 112 SSSGLTLVATNEYGEYDRGALALYGFDMLVEPYKKTTISVTGPASSSGSISYS-----WLLVREDDDEP--EAVELEVVEQDDTPSGSSVKVTLTEAGATYALHVQQQQLAPEGG-GDASVAVVVSEKTIQVACKHVRRELRDLTSADRTAFFSAMREFYTVNLEAGKEKYGKTFANSKIISTYHNT 290
BLAST of mRNA_C-tenellus_contig9867.1.1 vs. uniprot
Match: A0A6H5JZF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF0_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 5.440e-18 Identity = 68/193 (35.23%), Postives = 89/193 (46.11%), Query Frame = 3 Query: 468 SSTELFVHARNEYGASDPVALALYGYELLVEPYRETTLSVEFSDSVTAVMRESHPYFHWYLALADDDGSVIDGVE--PELDGEYGAEVLVTLKDPGSVYRLTVSEVFSDKSGGFRRTDVAQVPTSVSLLVTCKYVRRELRQLTDQDLDDFMHAMSVFYDVAESDSPANYGPDFITAKDMVALHSSLLQLNGTN 1040 SS+ L + A NEYG D ALALYG+++LVEPY++TT+SV S + + W L DDD +E + D G+ V VTL + G+ Y SL VTC++VRRELR LT +D F AM FY V YG F +K M H S ++ G N Sbjct: 13 SSSGLTLVATNEYGEYDRGALALYGFDMLVEPYKKTTISVTGLASSSGSTS-----YTWLLVREDDDEPEAVDLEVVEQNDAPSGSSVNVTLIEAGATY---------------------------SLRVTCRHVRRELRDLTSEDRTAFFSAMRKFYTVNLEAGKEKYGKTFANSKIMSTYHHSRVRAGGRN 173
BLAST of mRNA_C-tenellus_contig9867.1.1 vs. uniprot
Match: D7FP10_ECTSI (TYRosinase family member (Tyr-3) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP10_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 2.540e-17 Identity = 63/191 (32.98%), Postives = 99/191 (51.83%), Query Frame = 3 Query: 471 STELFVHARNEYGASDPVALALYGYELLVEPYRETTLSVEFSDSVTAVMRESHPYFHWYLALADDDGSVIDGVEPELDGEYG---------AEVLVTLKDPGSVYRLTVSEVFSDKSGGFRRTDVAQVPTSVSLLVTCKYVRRELRQLTDQDLDDFMHAMSVFYDVAESDSPANYGPDFITAKDMVALHSS 1016 S +L + A NEYG D +L +YG ++++EP+R TT++ E + +H Y W L AD +G+ P+ G G +V V L+ PG+ Y L+V V D++G +V T + V+CKYVRRE+R LTD+D + F+ AM ++Y + YGP F + + A H++ Sbjct: 17 SPKLKLRATNEYGEYDKASLKMYGLDMVIEPFRSTTVTAEGM----LIDSPAHMYV-WRLRYADQEGA------PQNSGTAGDAWNCTTGKPQVTVELERPGTAYFLSVESV--DENG--------RVITEGNSKVSCKYVRREIRDLTDRDREAFLDAMLIWYTLPTDVGKDRYGPSFSNYQVITAYHNA 186
BLAST of mRNA_C-tenellus_contig9867.1.1 vs. uniprot
Match: D7G530_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G530_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 5.220e-16 Identity = 60/168 (35.71%), Postives = 85/168 (50.60%), Query Frame = 3 Query: 528 LALYGYELLVEPYRETTLSVEFSDSVTAVMRESHPYFHWYLALADDDGSVIDGVEPELDGEY-----GAEVLVTLKDPGSVYRLTVSEVFSDKSGGFRRTDVAQVPTSVSLLVTCKYVRRELRQLTDQDLDDFMHAMSVFYDVAESDSPANYGPDFITAKDMVALHSS 1016 L YG ++++EP+RETTL+VE +V+ R S W L A + G + E DG+ G + VTL PG+VY LTV EV D QV + +CKYVRRE+R LTD D + F+ AM +Y + A YGP++ + A+H + Sbjct: 10 LETYGLDMVIEPFRETTLAVE-GTNVSLSGRYS-----WRLQHASEQGITV-----EDDGDLWAHSGGPQATVTLDSPGTVYVLTVREVSED----------GQVVAEGRVKASCKYVRREIRDLTDGDREAFLDAMETWYTLPTDAGKAKYGPNYSNYMSIAAIHGT 156
BLAST of mRNA_C-tenellus_contig9867.1.1 vs. uniprot
Match: D8LM86_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM86_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 1.390e-10 Identity = 56/205 (27.32%), Postives = 82/205 (40.00%), Query Frame = 3 Query: 528 LALYGYELLVEPYRETTLSVEFSDSVTAVMRESHPYFHWYLALADDDGSVIDGVEPELDGEYGAEVLVTLKDPGSVYRLTVSEVFSDKSGGFRRTDVAQVPTSVSLLVTCKYVRR---------------------------------------ELRQLTDQDLDDFMHAMSVFYDVAESDSPANYGPDFITAKDMVALHSSLLQ 1025 L YG ++++EP+R+TTL+VE + S++ + W L + G G + VTL PG+VY LTV EV D QV + +CKYVRR E+R+LTD+D + F AM +Y + S YGPDF + A+H + +Q Sbjct: 10 LGTYGLDMVIEPFRKTTLAVEGNVSLSR-------RYVWQLQHGSNHGVTAKDAGDAWAYTGGPQATVTLDSPGTVYVLTVREVSED----------GQVVAEARVEASCKYVRRFPLGACVQYLRVWRPFASGQPLTRPQHVPPLLLVSCDRREIRELTDRDREAFFDAMQTWYTIPNSVGKTTYGPDFSNYMPVTAIHGTEVQ 197
BLAST of mRNA_C-tenellus_contig9867.1.1 vs. uniprot
Match: A0A835Z854_9STRA (Polyphenol oxidase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z854_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 2.270e-10 Identity = 40/126 (31.75%), Postives = 65/126 (51.59%), Query Frame = 3 Query: 642 WYLALADDDGSVIDGVEPELDGEYGAEVLVTLKDPGSVYRLTVSEVFSDKSGGFRRTDVAQVPTSVSLLVTCKYVRRELRQLTDQDLDDFMHAMSVFYDVAESDSPANYGPDFITAKDMVALHSSL 1019 W L L D+ G+ D + + G Y V V L PG Y LTV+E + G V S++ + C+YVRRE+R L+ D D F+ A+++ Y ++ + A YG F++ + + A+H + Sbjct: 66 WSLTLLDESGAASDTIVSDQVGSY---VDVVLTAPGHSYTLTVTEQLTATDG------TTTVVASLAATIACRYVRREIRALSQVDRDRFLDALAILYFNSDEEGQAKYGDQFVSYERLCAMHDDI 182
BLAST of mRNA_C-tenellus_contig9867.1.1 vs. uniprot
Match: A0A7S3YHN7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YHN7_HETAK) HSP 1 Score: 71.2 bits (173), Expect = 4.070e-10 Identity = 47/162 (29.01%), Postives = 73/162 (45.06%), Query Frame = 3 Query: 525 ALALYGYELLVEPYRETTLSVEFSDSVTAVMRESHPYFHWYLALADDDGSVIDGVEPELDGEYGAEVLVTLKDPGSVYRLTVSEVFSDKSGGFRRTDVAQVPTSVSLLVTCKYVRRELRQLTDQDLDDFMHAMSVFYDVAESDSPANYGPDFITAKDMVALH 1010 +L LY + +VEPYR T+L + M S F W + D++ + ++ LD +EV GS Y + V + G SV V CKYVRRE+R L D D +F++A+ +F+ + + YG DF +D+ +H Sbjct: 94 SLHLYNFPFVVEPYRTTSLKIP-----EIFMSASSTPFSW--EILDENNNPLEVTS--LDATLSSEVSAVFTSAGSFYTIQV------EGNGL----------SVQTKVICKYVRREIRSLNDDDKSNFLNALKIFHTIDSEEGKRLYGEDFFNYQDLTNMH 230
BLAST of mRNA_C-tenellus_contig9867.1.1 vs. uniprot
Match: A0A7S3XY60_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY60_HETAK) HSP 1 Score: 71.6 bits (174), Expect = 1.080e-9 Identity = 56/192 (29.17%), Postives = 95/192 (49.48%), Query Frame = 3 Query: 534 LYGYELLVEPYRETTLSVEFSDSVTAVMRESHPYFHWYLALADDDGSVIDGVEPELDGEYGAEVLVTLKDPGSVYRLTVSEVFSDKSGGFRRTDVAQVPTSVSLLVTCKYVRRELRQLTDQDLDDFMHAMSVFYDVAESDSPANYGPDFITAKDMVALHSSLLQ-----LNGTN*WGTLFRNHFRTEFIVQL 1094 +YG+E +VEPYR TTL++ ++S + + W + L D + + VE E +G+ + + T PG Y + + E SD +G T+V + V CKYVRRE+R L ++D + + A+ ++ ++ + YG F AKD+ H ++++ G N T F R E ++QL Sbjct: 123 MYGWEFIVEPYRRTTLTIRSTNSDPSTKHQ------WTVFL---DENPHEHVEIEDNGQSVVQAMFT--KPGRFYHVHIEE--SDSNGN---TNVFKYK------VICKYVRREIRSLHEEDREKYFSALEAYHRLSMEEGQQLYGMTFHNAKDLTIRHLAVIEDCSPWHGGANFVPTHFAFVARLEQVLQL 292
BLAST of mRNA_C-tenellus_contig9867.1.1 vs. uniprot
Match: D7FSG6_ECTSI (Common central domain of tyrosinase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG6_ECTSI) HSP 1 Score: 65.5 bits (158), Expect = 9.530e-8 Identity = 45/137 (32.85%), Postives = 71/137 (51.82%), Query Frame = 3 Query: 636 FHWYLA-LADDDGSVIDGVEPELDGEYGAEVLVTLKDPGSVYRLTVSE------VFSDKSGGFRRTDVAQVPTSVSLLVTCKYVRRELRQLTDQDLDDFMHAMSVFYDVAESDSPANYGPDFITAKDMVALHSSLLQ 1025 F W + L +++G + E +G AEV V PG VY LTV E V D + + A + + ++ V+CK+VRRELR L++ D + F+ AM +Y V++ D A YG F + + + HS+ L+ Sbjct: 48 FSWKVVELGEEEGGPAATIFEEEEGR--AEVSVEFTKPGGVYLLTVEERLRAGAVSRDGTVVLNAGETAVIGRA-TIKVSCKHVRRELRDLSEADREAFLDAMEAYYAVSKEDGRAKYGEGFFDYQLLASYHSADLK 181
BLAST of mRNA_C-tenellus_contig9867.1.1 vs. uniprot
Match: A0A7S2W132_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W132_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.900e-6 Identity = 66/199 (33.17%), Postives = 91/199 (45.73%), Query Frame = 3 Query: 459 TSPSSTELFVHARNEYG---ASDPVALALYGYE-----LLVEPYRETTLSVEF----SDSVTAVMRESHPYFHWYLALADDDGSVIDGVEPELDGEYGAEVLVTLKDPGSVYRLTVSEVFSDKSGGFRRTDVAQVPTSVSLLVTCKYVRRELRQLTDQDLDDFMHAMSVFYDVAESDSPANYGPDFITAKDMVALHSSL 1019 T+ SST L V A NEYG A D L G + ++VEP+R+TTL+ + S S T R +F W L S G P L G V+V L+ G ++ + +S+V R V V KYVRRELR LTD+DL DF+ A S + V+ D +GP + + +H+ L Sbjct: 282 TARSSTLLRVLATNEYGTFTAEDFTYPFLAGRKDPSEAVVVEPFRDTTLAAVWHGAASSSSTGCPR---CHFQWVL-------STTRGTTPPLVLS-GDSVVVHLEQTG-LWSMELSQV---------RDGDGVVVHRRMFTVYVKYVRRELRDLTDKDLTDFVAAASTLWKVSTVDGRDLFGPRYYDIYYLALVHNDL 459 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9867.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9867.1.1 >prot_C-tenellus_contig9867.1.1 ID=prot_C-tenellus_contig9867.1.1|Name=mRNA_C-tenellus_contig9867.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=330bp MEERSDQGLHQSYGSIAMGESVAPSSSRVQPAVGENLTADGVRPSRRNPYback to top mRNA from alignment at C-tenellus_contig9867:1545..4015+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9867.1.1 ID=mRNA_C-tenellus_contig9867.1.1|Name=mRNA_C-tenellus_contig9867.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2471bp|location=Sequence derived from alignment at C-tenellus_contig9867:1545..4015+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9867:1545..4015+ >mRNA_C-tenellus_contig9867.1.1 ID=mRNA_C-tenellus_contig9867.1.1|Name=mRNA_C-tenellus_contig9867.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=990bp|location=Sequence derived from alignment at C-tenellus_contig9867:1545..4015+ (Choristocarpus tenellus KU2346)back to top |