mRNA_C-tenellus_contig9865.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9865.1.1 vs. uniprot
Match: D7FUH7_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH7_ECTSI) HSP 1 Score: 139 bits (351), Expect = 7.860e-38 Identity = 63/115 (54.78%), Postives = 88/115 (76.52%), Query Frame = 1 Query: 100 CTEEDLPEICTVDGDCGGVVRDMSNPSDRVPTSVATGENMSPSDLSAIETMCYSILLNNQMRAGFDAGAPYGASALYWGAWTGVFRYFPGNAQDVCGDFDPRNRPWFISAGSGPK 444 CT+ ++ EIC + DCG ++RD NP+ R+P SVA GEN++P+D IETMCYS+LLN +R ++ + G++A+Y+GAWTGVFRYFPG AQ+ CG +DPR RPW+++A SGPK Sbjct: 2 CTQYEILEICAEE-DCG-MIRDYDNPTVRLPESVADGENLNPTDEDVIETMCYSVLLNTPLRDLYEEASQVGSNAVYFGAWTGVFRYFPGIAQESCGTYDPRIRPWYVAASSGPK 114
BLAST of mRNA_C-tenellus_contig9865.1.1 vs. uniprot
Match: A0A7S2LVH6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LVH6_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 6.340e-21 Identity = 54/158 (34.18%), Postives = 84/158 (53.16%), Query Frame = 1 Query: 1 QVNVAFQGRCAI-TKSECKNLHIDACRSRFPTGECTEEDLPEICTVDGDCGG---VVRDMSNPSDRVPTSVATGENMSPSDLSAIETMCYSILLNNQMRAGFDAGAPYGASA------LYWGAWTGVFRYFPGNAQDVCGDFDPRNRPWFISAGSGPK 444 +V A+ RC+I T S+C + C S FP +C D + G GG + D + +P+++A G++ +P+D IET CY++L + MR ++ + S Y+GA G+FR PG + CG++DPR RPWF++A SGPK Sbjct: 104 EVENAYTQRCSIETLSQCSRGSFNGCSSVFPNQQCMAADELVVEACGGGSGGGCNALWDKTTSIVSIPSALAQGKDDNPTDPELIETACYTLLAEDYMRTKYENDEIFWDSYNVQPSWTYFGAHNGLFRKLPGTVDEECGNYDPRLRPWFVAASSGPK 261
BLAST of mRNA_C-tenellus_contig9865.1.1 vs. uniprot
Match: K0R0F1_THAOC (VWFA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R0F1_THAOC) HSP 1 Score: 89.7 bits (221), Expect = 4.750e-18 Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 1 Query: 1 QVNVAFQGRCAI-TKSECKNLHIDACRSRFPTGECTE--EDLPEICTVDGDCGGVVRDMSNPSDRVPTSVATGENMSPSDLSAIETMCYSILLNNQMRAGFDAGAPYGASALYWGAWTGVFRYFPGNAQDVCGDFDPRNRPWFISAGSGPK 444 ++ +Q RC I T ++C + + C S +P C + E L C + + D + + R+P +A G+ +PSD +E++CYS L M G + +Y+G+ TG R P +VCG +DPR RPWF++A SGPK Sbjct: 47 EIERVYQNRCDIETLNQCGRSNFNDCTSTYPNQMCMDSSEMLVSACGSGSNGCNALWDKTQTAVRIPARLANGQGGNPSDDDLVESICYSRLAEPYMIKNNQDG-----NQMYYGSATGSLRIIPAQHSEVCGLYDPRRRPWFVAASSGPK 192
BLAST of mRNA_C-tenellus_contig9865.1.1 vs. uniprot
Match: K0TQX2_THAOC (VWFA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQX2_THAOC) HSP 1 Score: 86.7 bits (213), Expect = 5.770e-17 Identity = 54/156 (34.62%), Postives = 80/156 (51.28%), Query Frame = 1 Query: 1 QVNVAFQGRC-AITKSECKNLHIDACRSRFPTGECT-EEDLPEICTVDGDCGGVVRDMSNPSDRVPTSVATGENMSPSDLSAIETMCYSILLNNQMRAGFDAG----APYGA--SALYWGAWTGVFRYFPGNAQDVCGDFDPRNRPWFISAGSGPK 444 +V A+ RC T C + +C S F G+CT EE+L +G + D + + +P+ + D IET+CYS+L M F+ A YG+ S Y+GA G+FR P + Q+VCG++DPR RPW+++A SGPK Sbjct: 46 EVERAYSRRCETATLHGCSRASLSSCSSSFSNGQCTTEEELSIPACDEGAYCSSLWDAQSSAVSLPSFL-------DQDPEVIETICYSLLAEPFMVESFERDTEWHARYGSYPSWRYFGAHDGIFRKIPAHHQEVCGEYDPRKRPWYVAASSGPK 194
BLAST of mRNA_C-tenellus_contig9865.1.1 vs. uniprot
Match: A0A8J9TQH8_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TQH8_PHATR) HSP 1 Score: 79.7 bits (195), Expect = 2.690e-15 Identity = 50/156 (32.05%), Postives = 73/156 (46.79%), Query Frame = 1 Query: 1 QVNVAFQGRCAITKSE-CKNLHIDACRSRFPTGECTE-EDLPEICTVDGDCGGVVRDMSNPSDRVPTSVATGENMSPSDLSAIETMCYSILLNNQMRAGFDAGAPYG------ASALYWGAWTGVFRYFPGNAQDVCGDFDPRNRPWFISAGSGPK 444 QV +Q RC+ E C + + C S +P C +DL DG + D S + R+ T + +PSD + IET+C++ L+ PY +Y+G+ G FR +P + CG FDPR RPW+I+A SGPK Sbjct: 44 QVEFLYQTRCSEASMEACARANYNECTSLYPNQTCPGGQDLNVAQCGDGVSCASLWDYSVSNTRLHTDLIGASGGNPSDPNVIETVCFTQQLDEFFIRKRAEQKPYWDRLGLRTPQMYFGSQNGAFRIYPARQSETCGAFDPRVRPWYIAASSGPK 199
BLAST of mRNA_C-tenellus_contig9865.1.1 vs. uniprot
Match: A0A7R9U062_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9U062_9VIRI) HSP 1 Score: 81.3 bits (199), Expect = 4.390e-15 Identity = 50/155 (32.26%), Postives = 79/155 (50.97%), Query Frame = 1 Query: 1 QVNVAFQGRCAITKSECKNLHIDACRSRFPTGECTEEDLPEICTVDGDCG--GVVRDMSNPSDRVPTS-VATGENMSPSDLSAIETMCYSILLNNQMRAGFD---AGAPYGA-SALYWGAWTGVFRYFPGNAQDVCGDFDPRNRPWFISAGSGPK 444 +V + RCA++ + CK + C + + D +I G+CG G V D + + R+P + ++ G SP S ET+CY+ + + M + AG+ + Y+GA G+FR++P VCG +DPR RPWF +A SGPK Sbjct: 27 EVEKQYARRCALSANSCKEAAYEGCVTSYTDQAECSADYIKI----GECGSCGAVFDFTTSNVRIPKAYMSNGPGSSPDTPSLKETVCYTNAITDFMVRQAEEVKAGSVFQEIPQTYFGAHNGLFRFYPARQTGVCGGYDPRVRPWFTAASSGPK 177
BLAST of mRNA_C-tenellus_contig9865.1.1 vs. uniprot
Match: A0A7S3P4E5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4E5_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 4.420e-15 Identity = 49/156 (31.41%), Postives = 76/156 (48.72%), Query Frame = 1 Query: 19 QGRCA--ITKSECKNLHIDACRSRFPTGECTEEDLPEICT------VDGDCGGVVRDMSNPSDRVPTSVATGENMSPSDLSAIETMCYSILLNNQMRAGFDAGAPYGAS------ALYWGAWTGVFRYFPGNAQDVCGDFDPRNRPWFISAGSGPK 444 Q RC + C + C+S FP +C + +I D C G+ D S + R+P +A G +P+D IET+CY+ ++ ++A + Y + A Y+G+ G FR +P D CG +DPR RPW+++A SGPK Sbjct: 117 QTRCETIVDLETCNRGNYHDCQSVFPDPQCLGGESYQISACGNGSIADNQCSGLY-DFSVSNVRIPAELADGPFGNPTDKQVIETICYTQAMDEFLQAKRETDKAYWENIGVEPRAWYFGSSVGSFRIWPARPGDDCGQYDPRVRPWYVAASSGPK 271
BLAST of mRNA_C-tenellus_contig9865.1.1 vs. uniprot
Match: B7G9V1_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G9V1_PHATC) HSP 1 Score: 78.6 bits (192), Expect = 3.730e-14 Identity = 52/157 (33.12%), Postives = 78/157 (49.68%), Query Frame = 1 Query: 1 QVNVAFQGRC-AITKSECKNLHIDACRSRFPTGECTE-EDLPEICTVDG-DCGGVVRDMSNPSDRVPTSVATGENMSPSDLSAIETMCYSILLNNQMRAGFDAGAPYGASA------LYWGAWTGVFRYFPGNAQDVCGDFDPRNRPWFISAGSGPK 444 QV + +Q RC I+ +C + C S +P C EDL DG C G+ D S + R+ ++ + +PSD + IET+C++ L+ PY S +Y+G+ G FR +P + CG +DPR RPW+I+A SGPK Sbjct: 44 QVELLYQKRCNEISLRQCARGSYNECTSLYPNQTCPGGEDLNVAQCGDGVSCSGLW-DYSISNTRLHQNLVDSADGNPSDPNVIETICFTQQLDEFFVQKRAEQKPYWDSLGLRTPQMYFGSQNGAFRIYPARQSETCGVYDPRLRPWYIAASSGPK 199
BLAST of mRNA_C-tenellus_contig9865.1.1 vs. uniprot
Match: A0A7S1UP04_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UP04_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 7.430e-12 Identity = 50/155 (32.26%), Postives = 70/155 (45.16%), Query Frame = 1 Query: 16 FQGRC-AITKSECKNLHIDACRSRFPTGECTEE--DLPE-ICTVDGDCGGVVRDMSNPSDRVPTSVATGE--NMSPSDLSAIETMCYSILLNNQMRAGFDAGAP----YGASA--LYWGAWTGVFRYFPGNAQDVCGDFDPRNRPWFISAGSGPK 444 F RC A C + D C + FP C + DL +C G C D S R+P V E N PS+ IET+C++ L+ + D YG +++G GVFR +P D+C ++DP RPWF++ SGPK Sbjct: 61 FNNRCDASILQTCDRSNHDECNTIFPNLTCQNKGHDLETLVCAEAGQCMTSGFDTSQSVIRLPPYVTLTEDGNPDPSNTEVIETICFTQQLDPWFQEKRDEDLEFYQGYGIDPPQMHYGDRNGVFRLYPARHSDICHEYDPTIRPWFVAGSSGPK 215
BLAST of mRNA_C-tenellus_contig9865.1.1 vs. uniprot
Match: A0A7S2LVG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LVG3_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 2.170e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 1 Query: 319 SALYWGAWTGVFRYFPGNAQDVCGDFDPRNRPWFISAGSGPK 444 S Y+GA G+FR P Q CG++DPR RPWF++A SGPK Sbjct: 15 SLTYFGAHNGLFRILPALGQVECGNYDPRKRPWFVAASSGPK 56 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9865.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9865.1.1 >prot_C-tenellus_contig9865.1.1 ID=prot_C-tenellus_contig9865.1.1|Name=mRNA_C-tenellus_contig9865.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=148bp QVNVAFQGRCAITKSECKNLHIDACRSRFPTGECTEEDLPEICTVDGDCGback to top mRNA from alignment at C-tenellus_contig9865:175..3781- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9865.1.1 ID=mRNA_C-tenellus_contig9865.1.1|Name=mRNA_C-tenellus_contig9865.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3607bp|location=Sequence derived from alignment at C-tenellus_contig9865:175..3781- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9865:175..3781- >mRNA_C-tenellus_contig9865.1.1 ID=mRNA_C-tenellus_contig9865.1.1|Name=mRNA_C-tenellus_contig9865.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=444bp|location=Sequence derived from alignment at C-tenellus_contig9865:175..3781- (Choristocarpus tenellus KU2346)back to top |