mRNA_C-tenellus_contig9856.1.5 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: D8LQ49_ECTSI (HPP family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ49_ECTSI) HSP 1 Score: 223 bits (568), Expect = 4.550e-59 Identity = 161/519 (31.02%), Postives = 232/519 (44.70%), Query Frame = 2 Query: 302 LITHRFVPLIPPVQKMLETVCSDLDAYGESFVPNEGNGHTLVHCCSFIPERVNDQTDADLVHFSRNANT-----------ETYAKRIGLPGITWATETPALHDIKAMVVDPCCNPGGSRLKQASMLFHTALTIPLIIDRGGTKIQK---GGFSQSLGVLVVYLPTPQN--HISALMTYAESIAGAAQRVSQLMMHRALFIEGRRNRLQRNMRVMKIALYFLMPMLIRYHNRTGDQVT------------------------DTFEFLELKSDTPPMAEQIIQRRSPHRSPVIGGKVLSYTRRPSWMRLSDIDTSTAVLKRERSSAGLASARLLDLLTYGSTAKPVKMKKMPLLEACVTWVGTFCGIGATQVAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYW 1738 L+ R P+ P V+ ++E +C DL A GE FVP+ HTLV C FIP V + D F + E Y + IGLPGI WAT L ++ + D + GG RL QA +F TAL IP+ T G Q +GV+V+Y P+N SAL+ YA ++A +A +S+LM+HRA F+ GR +R++RN RV+ I L F M ML+RY RTG T T F + T P A ++ R HR V+ ++ D T + +E L A + L + + TW GTF IG+ Q+ +D +N + W Q + V+ F G VWLQK+++ + I M L G +HPPAGAL ++ + A N+ AT E++++LV+SV GLGMH+ V I +N++S +R YP +W Sbjct: 134 LLPRRKAPITPAVRYLMEAMCVDLVACGECFVPHFRARHTLVRFCGFIPPEVREGLDKQTRRFMGGEDVCDAVDGNVTGGEAYGRGIGLPGIAWATARATLVELSTLTSDASFDCGGVRLAQAGKIFQTALAIPIYFATNPTNTGSTLWGQQQQLMGVVVIYFRGPKNASSASALVRYASAVAKSAGPISELMVHRARFVVGRSHRIKRNWRVLIIGLRFAMLMLVRYRQRTGKAATPLTKSVDDAASQSLGGGYDGTATTSTPRFSFTRGTTRPSAGEMSASRRTHRVETSERAVMVVG------QVQDRTKQTILPSKEE----LTKAWVHQYLAKAKGGPVNLPARASPRDGFFTWFGTFAAIGSLQLIYDRINQSSLWETQ------------------------------------------MVVVSIFEEGQAVWLQKSVSVASVILGMSLTGSVHPPAGALCLVLLSAYNDGATWERMLLLVVSVAMGLGMHLLVGICINNISPRRGYPAFW 600
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A7S4CNL2_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CNL2_9EUGL) HSP 1 Score: 150 bits (378), Expect = 1.080e-37 Identity = 83/176 (47.16%), Postives = 114/176 (64.77%), Query Frame = 2 Query: 1196 GSTAKPVKMKKMPLLEACVTWVGTFCGIGATQVAFDILN-SAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKR 1720 G A P K+M + +TW+ TF I + + F +N + +A GQ DLF L GSFGAL+TLLY+LP+APLAQPR +L H+L M V+Y F G VWLQKALA S+T++ M +G HPPAGAL++IF G N+ +N ++ L +SVL GL + + +AI LN+LS +R Sbjct: 26 GKAAMP---KRMQWDLSLLTWLATFTAIASMGLIFQAINDTGLAIEGQQDLFTLAGSFGALSTLLYSLPSAPLAQPRVLLLGHVLAMCVSCAVMYPFGRGTEVWLQKALACSITVALMAKLGFPHPPAGALTLIFTGNFNSGKSNWNILFLAISVLMGLCISVIIAIVLNNLSRRR 198
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A7S3HJK6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJK6_9STRA) HSP 1 Score: 157 bits (396), Expect = 2.390e-37 Identity = 128/477 (26.83%), Postives = 224/477 (46.96%), Query Frame = 2 Query: 347 MLETVCSDLDAYGESFVPNEGNGHTLVHCCSFIPERVNDQTDADLVHFSRNANTETYAKRIGLPGITWATETPALHDIKAMVVDPCCNPGGSRLKQASMLFHTALTIPLIIDRGGTKIQKGGFSQSLGVLVVYLPTPQNHISALMTYAESIAGAAQRVSQLMMHRALFIEG-------RRNRLQRN-----MRVMKIALYFLMPMLIRYHNRTGDQVTDTFEFLELKSDTPPMAEQIIQRRSPHRSPVIGGKVLSYTRRPSWMRLSDIDTSTAVLKRERSSAGLASARLLDLLTYGSTAKPVKMKKMPLLEACVTWVGTFCGIGATQVAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATN-EQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYW 1738 ML+ C+ L YGESF+ L + S + +N +D +++ +Y +GLPG T ++++K +++D + GGSRL + +F A T+P+I+ + ++GG + +GV+V+YL + L TY E++ L+ RA + R N + +N +V K+++ + V++T E +L+ + E + + +P R + ++L RP W++ R L G P ++ + + ++GTF + QV FD +N + + G G+LF++ SFGAL+T++YALPAAPL QPR V AH MA + +IY F VWLQ+ALAA + I M +G+++PP+GA+S+ + N+ + + E ++ V+S + I V + ++ R+YP W Sbjct: 39 MLKVPCNTLKCYGESFIMENNE---LKYSESCLDYSLNLPGVSD--ELAQSGKGSSYIDGVGLPGDCKTKRTAEVYNLKMLILDGYFDTGGSRLVHFANVFKLACTLPVIVPK-----REGG-ADFIGVVVLYLTFEPTELEPLQTYLEALVADMGPGYNLIEKRANVMASMSRQGSVRSNSISQNDIELERKVSKVSVVSI--------------VSETGEIYKLEIE-----ENVPEETAPKRKRPLSNRLLIEKARP-WLQ-----------------------RYLRKWEGGKNTLPPGLENK---YSFMAFIGTFAALAILQVIFDHINDSFTYRGVGNLFFIPTSFGALSTIVYALPAAPLGQPRIVYTAHTWAMAVSIVIIYIFDQYQYVWLQRALAAGVCIGGMAKLGILNPPSGAVSVALITYYNSASYSVEGLLFNVVSTYICCTLIILVGMLFQNVLRDRAYPTVW 458
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A7S0UCK6_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UCK6_HEMAN) HSP 1 Score: 103 bits (258), Expect = 9.220e-20 Identity = 70/186 (37.63%), Postives = 104/186 (55.91%), Query Frame = 2 Query: 1196 GSTAKPVKMKKMPLLEAC-VTWVGTFCGIGATQVAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIY----SFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYW 1738 G A P K E C VT+VG F + A A D L + +N + ++ L GSFGALATLL+A P APLAQPR V+ H++ A G+ V Y F + W+ ALA ++ I+ M G+ HPPAGA S++++ + N + + +V+ ++ G M + VA+ +N+LS R YP +W Sbjct: 249 GQKASPPKPNSA---EFCFVTFVGCFLSLLALSGADDALRRHI-FNNE-EMLLLIGSFGALATLLFAAPVAPLAQPRIVVGGHIISAAVGIIVDYLTNDKFVAIIPQWVANALAPALAITLMAATGLTHPPAGACSLMYI-SGNARIKSLGWLFIVVPIITGSLMMLGVALLVNNLSKHRKYPLFW 428
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A7V6X1J0_9FIRM (HPP family protein n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A7V6X1J0_9FIRM) HSP 1 Score: 91.7 bits (226), Expect = 1.050e-17 Identity = 57/166 (34.34%), Postives = 86/166 (51.81%), Query Frame = 2 Query: 1241 EACVTWVGTFCGIGATQVAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYW 1738 + ++W+G F GI + VAF L D+ + SFGA A L+Y +P PLAQPR V+F H+L GV V F + W AL S++I+ M L HPPAGA ++ V T + + ++ V G + + + + N++S +RSYP+YW Sbjct: 17 DVFISWLGAFLGI--STVAFLTLTY--------DVPLMVASFGASAVLIYGVPDVPLAQPRNVIFGHILSATTGVIVYSLFG---LTWWSTALGCSLSIALMLLTKTTHPPAGATGMVAVW------TQQSPMFIIAPVAIGAVILVIIGLFTNNISPRRSYPKYW 163
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: UPI0013D15E96 (HPP family protein n=1 Tax=Desulfopila sp. IMCC35008 TaxID=2653858 RepID=UPI0013D15E96) HSP 1 Score: 90.9 bits (224), Expect = 2.790e-17 Identity = 63/183 (34.43%), Postives = 94/183 (51.37%), Query Frame = 2 Query: 1196 GSTAKPVKMKKMPLLEACVTWVGTFCGIGATQ-VAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFV-GAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYW 1738 GST P ++ E +W+G F GIGA + F++ + D L GSFGA A L+Y +PLAQPR + H+L GV FP +WL +L+ + I+ M +HPP GA ++I V G+A N + +VL V G + + +A+ +N++ KRSYPE+W Sbjct: 9 GSTISPPRVS---FAEILWSWLGAFLGIGAVSYIHFNLFDGL-------DSVMLIGSFGASAVLIYGAVKSPLAQPRNFIGGHVLSAIIGVTFYKLFP--EQLWLASSLSVATAIAVMHATKTLHPPGGATALIAVIGSAK--IHNLGYLYVVLPVGIGALIMLVIALLVNNIPKKRSYPEFW 177
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A830I2A8_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830I2A8_9CHLO) HSP 1 Score: 94.7 bits (234), Expect = 1.300e-16 Identity = 65/190 (34.21%), Postives = 95/190 (50.00%), Query Frame = 2 Query: 1193 YGSTAKPVKMKKMPLLEACVTWVGTFCGIGATQVAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPC--------GVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYW 1738 + AK K + L +A ++G F T + N ++ G+ L GS GAL TLL+A P +PLAQPR VL+ HL MAC VG++ ++ G+ W+ +AL+ S+ I+ M L GV HPPAGA+S+I V A + V V + + + VA N+ K+ YP W Sbjct: 271 FKGAAKGTPPKMIKLEQAAHIFIGVFI----TLILLSGGNKLISEETSGEYGLLLGSMGALCTLLFAAPNSPLAQPRNVLYGHL--MACLVGIVLNYMTETANDKGDGIPRWVTQALSPSLAIAGMALFGVTHPPAGAVSLIMVSAKPMIDAKWRAVGA--PVFAMITISVIVASMYNNAHPKKQYPTAW 452
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A7K3NPT4_9DELT (HPP family protein n=2 Tax=root TaxID=1 RepID=A0A7K3NPT4_9DELT) HSP 1 Score: 89.0 bits (219), Expect = 1.300e-16 Identity = 61/167 (36.53%), Postives = 84/167 (50.30%), Query Frame = 2 Query: 1241 EACVTWVGTFCGIGATQVAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYWW 1741 E ++ G F GI A L A L L GSFGA A L+Y +PLAQPR VLF H+L GV + G +VWL ALA + I+ M L +HPP GA ++I V ++ + LV + L G + + VA+ +N++ R YPE+WW Sbjct: 21 EVAWSFAGAFVGIAAVGFLHAGLLDATG------LGLLIGSFGATAVLVYGAIKSPLAQPRNVLFGHVLSALAGVAAQQAL--GEVVWLAAALAVASAIAIMHLTKTLHPPGGATALIAVIGGDSVHALGYLYALVPAGL-GATVLLLVALIVNNIPKNRRYPEFWW 178
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A1M7YCV1_9DELT (HPP family protein n=1 Tax=Desulfopila aestuarii DSM 18488 TaxID=1121416 RepID=A0A1M7YCV1_9DELT) HSP 1 Score: 87.8 bits (216), Expect = 3.290e-16 Identity = 65/185 (35.14%), Postives = 90/185 (48.65%), Query Frame = 2 Query: 1196 GSTAKPVKMKKMPLLEACVTWVGTFCGIGATQVA-FDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHIS--VAIGLNHLSSKRSYPEYWW 1741 G T P ++ L E +W+G F GI A F++L + D L GSFGA A L+Y +PLAQPR L HL+ GV FP +WL +LA S+ I+ M +HPP GA ++I A T + L + G G I VA+ +N++ KRSYPE+W+ Sbjct: 9 GVTKSPPRVS---LAEIFWSWLGAFVGISAVAYCHFNLLEPS-------DAVMLIGSFGASAVLIYGAIKSPLAQPRNFLGGHLVSAVIGVTCYKLFPD--QLWLASSLAVSVAIAVMHATKTLHPPGGATALI---AVIGTTKVHHLGYLYALMPVGAGALIMLLVALLINNIPKKRSYPEFWF 178
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A7S1VY98_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VY98_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 9.970e-16 Identity = 60/182 (32.97%), Postives = 93/182 (51.10%), Query Frame = 2 Query: 1193 YGSTAKPVKMKKMPLLEACVTWVGTFCGIGATQVAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYW 1738 YG +P P + TF G+ AT A ++ V+ + + FGAL TL Y L AAP +QPR ++ LGM+ G+ + S + +WL+++L+A++ + M +G IHPP GAL+I+F A NNT + L G + I++A +N+LS R YP +W Sbjct: 67 YGGNVQPP-----PAASWIQSLFNTF-GVFATISAITNFSNGVSNATNSKAYAIMPVFGALVTLQYGLTAAPPSQPRNIILGQFLGMSIGMAI--SKAASLELWLRQSLSAALVVGCMSKLGTIHPPGGALAIVF-SAGNNTWNQVG------THLAGDVIAIAIAAWINNLSYIRQYPTFW 233 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9856.1.5 >prot_C-tenellus_contig9856.1.5 ID=prot_C-tenellus_contig9856.1.5|Name=mRNA_C-tenellus_contig9856.1.5|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=555bp MLASFSRSQSVGNLAKSGNDEPARTPLLKPGHRSVSPSGTFAPMQRNPNVback to top mRNA from alignment at C-tenellus_contig9856:2..4552- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9856.1.5 ID=mRNA_C-tenellus_contig9856.1.5|Name=mRNA_C-tenellus_contig9856.1.5|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4551bp|location=Sequence derived from alignment at C-tenellus_contig9856:2..4552- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9856:2..4552- >mRNA_C-tenellus_contig9856.1.5 ID=mRNA_C-tenellus_contig9856.1.5|Name=mRNA_C-tenellus_contig9856.1.5|organism=Choristocarpus tenellus KU2346|type=CDS|length=1665bp|location=Sequence derived from alignment at C-tenellus_contig9856:2..4552- (Choristocarpus tenellus KU2346)back to top |