mRNA_C-tenellus_contig9856.1.5 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9856.1.5
Unique NamemRNA_C-tenellus_contig9856.1.5
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: D8LQ49_ECTSI (HPP family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ49_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 4.550e-59
Identity = 161/519 (31.02%), Postives = 232/519 (44.70%), Query Frame = 2
Query:  302 LITHRFVPLIPPVQKMLETVCSDLDAYGESFVPNEGNGHTLVHCCSFIPERVNDQTDADLVHFSRNANT-----------ETYAKRIGLPGITWATETPALHDIKAMVVDPCCNPGGSRLKQASMLFHTALTIPLIIDRGGTKIQK---GGFSQSLGVLVVYLPTPQN--HISALMTYAESIAGAAQRVSQLMMHRALFIEGRRNRLQRNMRVMKIALYFLMPMLIRYHNRTGDQVT------------------------DTFEFLELKSDTPPMAEQIIQRRSPHRSPVIGGKVLSYTRRPSWMRLSDIDTSTAVLKRERSSAGLASARLLDLLTYGSTAKPVKMKKMPLLEACVTWVGTFCGIGATQVAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYW 1738
            L+  R  P+ P V+ ++E +C DL A GE FVP+    HTLV  C FIP  V +  D     F    +            E Y + IGLPGI WAT    L ++  +  D   + GG RL QA  +F TAL IP+      T       G   Q +GV+V+Y   P+N    SAL+ YA ++A +A  +S+LM+HRA F+ GR +R++RN RV+ I L F M ML+RY  RTG   T                         T  F   +  T P A ++   R  HR       V+         ++ D    T +  +E     L  A +   L            +    +   TW GTF  IG+ Q+ +D +N +  W  Q                                          + V+  F  G  VWLQK+++ +  I  M L G +HPPAGAL ++ + A N+ AT E++++LV+SV  GLGMH+ V I +N++S +R YP +W
Sbjct:  134 LLPRRKAPITPAVRYLMEAMCVDLVACGECFVPHFRARHTLVRFCGFIPPEVREGLDKQTRRFMGGEDVCDAVDGNVTGGEAYGRGIGLPGIAWATARATLVELSTLTSDASFDCGGVRLAQAGKIFQTALAIPIYFATNPTNTGSTLWGQQQQLMGVVVIYFRGPKNASSASALVRYASAVAKSAGPISELMVHRARFVVGRSHRIKRNWRVLIIGLRFAMLMLVRYRQRTGKAATPLTKSVDDAASQSLGGGYDGTATTSTPRFSFTRGTTRPSAGEMSASRRTHRVETSERAVMVVG------QVQDRTKQTILPSKEE----LTKAWVHQYLAKAKGGPVNLPARASPRDGFFTWFGTFAAIGSLQLIYDRINQSSLWETQ------------------------------------------MVVVSIFEEGQAVWLQKSVSVASVILGMSLTGSVHPPAGALCLVLLSAYNDGATWERMLLLVVSVAMGLGMHLLVGICINNISPRRGYPAFW 600          
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A7S4CNL2_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CNL2_9EUGL)

HSP 1 Score: 150 bits (378), Expect = 1.080e-37
Identity = 83/176 (47.16%), Postives = 114/176 (64.77%), Query Frame = 2
Query: 1196 GSTAKPVKMKKMPLLEACVTWVGTFCGIGATQVAFDILN-SAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKR 1720
            G  A P   K+M    + +TW+ TF  I +  + F  +N + +A  GQ DLF L GSFGAL+TLLY+LP+APLAQPR +L  H+L M     V+Y F  G  VWLQKALA S+T++ M  +G  HPPAGAL++IF G  N+  +N  ++ L +SVL GL + + +AI LN+LS +R
Sbjct:   26 GKAAMP---KRMQWDLSLLTWLATFTAIASMGLIFQAINDTGLAIEGQQDLFTLAGSFGALSTLLYSLPSAPLAQPRVLLLGHVLAMCVSCAVMYPFGRGTEVWLQKALACSITVALMAKLGFPHPPAGALTLIFTGNFNSGKSNWNILFLAISVLMGLCISVIIAIVLNNLSRRR 198          
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A7S3HJK6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJK6_9STRA)

HSP 1 Score: 157 bits (396), Expect = 2.390e-37
Identity = 128/477 (26.83%), Postives = 224/477 (46.96%), Query Frame = 2
Query:  347 MLETVCSDLDAYGESFVPNEGNGHTLVHCCSFIPERVNDQTDADLVHFSRNANTETYAKRIGLPGITWATETPALHDIKAMVVDPCCNPGGSRLKQASMLFHTALTIPLIIDRGGTKIQKGGFSQSLGVLVVYLPTPQNHISALMTYAESIAGAAQRVSQLMMHRALFIEG-------RRNRLQRN-----MRVMKIALYFLMPMLIRYHNRTGDQVTDTFEFLELKSDTPPMAEQIIQRRSPHRSPVIGGKVLSYTRRPSWMRLSDIDTSTAVLKRERSSAGLASARLLDLLTYGSTAKPVKMKKMPLLEACVTWVGTFCGIGATQVAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATN-EQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYW 1738
            ML+  C+ L  YGESF+        L +  S +   +N    +D    +++    +Y   +GLPG      T  ++++K +++D   + GGSRL   + +F  A T+P+I+ +     ++GG +  +GV+V+YL      +  L TY E++         L+  RA  +         R N + +N      +V K+++  +              V++T E  +L+ +     E + +  +P R   +  ++L    RP W++                       R L     G    P  ++      + + ++GTF  +   QV FD +N +  + G G+LF++  SFGAL+T++YALPAAPL QPR V  AH   MA  + +IY F     VWLQ+ALAA + I  M  +G+++PP+GA+S+  +   N+ + + E ++  V+S      + I V +   ++   R+YP  W
Sbjct:   39 MLKVPCNTLKCYGESFIMENNE---LKYSESCLDYSLNLPGVSD--ELAQSGKGSSYIDGVGLPGDCKTKRTAEVYNLKMLILDGYFDTGGSRLVHFANVFKLACTLPVIVPK-----REGG-ADFIGVVVLYLTFEPTELEPLQTYLEALVADMGPGYNLIEKRANVMASMSRQGSVRSNSISQNDIELERKVSKVSVVSI--------------VSETGEIYKLEIE-----ENVPEETAPKRKRPLSNRLLIEKARP-WLQ-----------------------RYLRKWEGGKNTLPPGLENK---YSFMAFIGTFAALAILQVIFDHINDSFTYRGVGNLFFIPTSFGALSTIVYALPAAPLGQPRIVYTAHTWAMAVSIVIIYIFDQYQYVWLQRALAAGVCIGGMAKLGILNPPSGAVSVALITYYNSASYSVEGLLFNVVSTYICCTLIILVGMLFQNVLRDRAYPTVW 458          
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A7S0UCK6_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UCK6_HEMAN)

HSP 1 Score: 103 bits (258), Expect = 9.220e-20
Identity = 70/186 (37.63%), Postives = 104/186 (55.91%), Query Frame = 2
Query: 1196 GSTAKPVKMKKMPLLEAC-VTWVGTFCGIGATQVAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIY----SFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYW 1738
            G  A P K       E C VT+VG F  + A   A D L   + +N + ++  L GSFGALATLL+A P APLAQPR V+  H++  A G+ V Y     F   +  W+  ALA ++ I+ M   G+ HPPAGA S++++ + N    +   + +V+ ++ G  M + VA+ +N+LS  R YP +W
Sbjct:  249 GQKASPPKPNSA---EFCFVTFVGCFLSLLALSGADDALRRHI-FNNE-EMLLLIGSFGALATLLFAAPVAPLAQPRIVVGGHIISAAVGIIVDYLTNDKFVAIIPQWVANALAPALAITLMAATGLTHPPAGACSLMYI-SGNARIKSLGWLFIVVPIITGSLMMLGVALLVNNLSKHRKYPLFW 428          
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A7V6X1J0_9FIRM (HPP family protein n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A7V6X1J0_9FIRM)

HSP 1 Score: 91.7 bits (226), Expect = 1.050e-17
Identity = 57/166 (34.34%), Postives = 86/166 (51.81%), Query Frame = 2
Query: 1241 EACVTWVGTFCGIGATQVAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYW 1738
            +  ++W+G F GI  + VAF  L          D+  +  SFGA A L+Y +P  PLAQPR V+F H+L    GV V   F    + W   AL  S++I+ M L    HPPAGA  ++ V       T +  + ++  V  G  + + + +  N++S +RSYP+YW
Sbjct:   17 DVFISWLGAFLGI--STVAFLTLTY--------DVPLMVASFGASAVLIYGVPDVPLAQPRNVIFGHILSATTGVIVYSLFG---LTWWSTALGCSLSIALMLLTKTTHPPAGATGMVAVW------TQQSPMFIIAPVAIGAVILVIIGLFTNNISPRRSYPKYW 163          
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: UPI0013D15E96 (HPP family protein n=1 Tax=Desulfopila sp. IMCC35008 TaxID=2653858 RepID=UPI0013D15E96)

HSP 1 Score: 90.9 bits (224), Expect = 2.790e-17
Identity = 63/183 (34.43%), Postives = 94/183 (51.37%), Query Frame = 2
Query: 1196 GSTAKPVKMKKMPLLEACVTWVGTFCGIGATQ-VAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFV-GAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYW 1738
            GST  P ++      E   +W+G F GIGA   + F++ +         D   L GSFGA A L+Y    +PLAQPR  +  H+L    GV     FP    +WL  +L+ +  I+ M     +HPP GA ++I V G+A     N   + +VL V  G  + + +A+ +N++  KRSYPE+W
Sbjct:    9 GSTISPPRVS---FAEILWSWLGAFLGIGAVSYIHFNLFDGL-------DSVMLIGSFGASAVLIYGAVKSPLAQPRNFIGGHVLSAIIGVTFYKLFP--EQLWLASSLSVATAIAVMHATKTLHPPGGATALIAVIGSAK--IHNLGYLYVVLPVGIGALIMLVIALLVNNIPKKRSYPEFW 177          
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A830I2A8_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830I2A8_9CHLO)

HSP 1 Score: 94.7 bits (234), Expect = 1.300e-16
Identity = 65/190 (34.21%), Postives = 95/190 (50.00%), Query Frame = 2
Query: 1193 YGSTAKPVKMKKMPLLEACVTWVGTFCGIGATQVAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPC--------GVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYW 1738
            +   AK    K + L +A   ++G F     T +     N  ++    G+   L GS GAL TLL+A P +PLAQPR VL+ HL  MAC VG++ ++          G+  W+ +AL+ S+ I+ M L GV HPPAGA+S+I V A        + V     V   + + + VA   N+   K+ YP  W
Sbjct:  271 FKGAAKGTPPKMIKLEQAAHIFIGVFI----TLILLSGGNKLISEETSGEYGLLLGSMGALCTLLFAAPNSPLAQPRNVLYGHL--MACLVGIVLNYMTETANDKGDGIPRWVTQALSPSLAIAGMALFGVTHPPAGAVSLIMVSAKPMIDAKWRAVGA--PVFAMITISVIVASMYNNAHPKKQYPTAW 452          
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A7K3NPT4_9DELT (HPP family protein n=2 Tax=root TaxID=1 RepID=A0A7K3NPT4_9DELT)

HSP 1 Score: 89.0 bits (219), Expect = 1.300e-16
Identity = 61/167 (36.53%), Postives = 84/167 (50.30%), Query Frame = 2
Query: 1241 EACVTWVGTFCGIGATQVAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYWW 1741
            E   ++ G F GI A       L  A        L  L GSFGA A L+Y    +PLAQPR VLF H+L    GV    +   G +VWL  ALA +  I+ M L   +HPP GA ++I V   ++      +  LV + L G  + + VA+ +N++   R YPE+WW
Sbjct:   21 EVAWSFAGAFVGIAAVGFLHAGLLDATG------LGLLIGSFGATAVLVYGAIKSPLAQPRNVLFGHVLSALAGVAAQQAL--GEVVWLAAALAVASAIAIMHLTKTLHPPGGATALIAVIGGDSVHALGYLYALVPAGL-GATVLLLVALIVNNIPKNRRYPEFWW 178          
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A1M7YCV1_9DELT (HPP family protein n=1 Tax=Desulfopila aestuarii DSM 18488 TaxID=1121416 RepID=A0A1M7YCV1_9DELT)

HSP 1 Score: 87.8 bits (216), Expect = 3.290e-16
Identity = 65/185 (35.14%), Postives = 90/185 (48.65%), Query Frame = 2
Query: 1196 GSTAKPVKMKKMPLLEACVTWVGTFCGIGATQVA-FDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHIS--VAIGLNHLSSKRSYPEYWW 1741
            G T  P ++    L E   +W+G F GI A     F++L  +       D   L GSFGA A L+Y    +PLAQPR  L  HL+    GV     FP    +WL  +LA S+ I+ M     +HPP GA ++I   A   T     +  L   +  G G  I   VA+ +N++  KRSYPE+W+
Sbjct:    9 GVTKSPPRVS---LAEIFWSWLGAFVGISAVAYCHFNLLEPS-------DAVMLIGSFGASAVLIYGAIKSPLAQPRNFLGGHLVSAVIGVTCYKLFPD--QLWLASSLAVSVAIAVMHATKTLHPPGGATALI---AVIGTTKVHHLGYLYALMPVGAGALIMLLVALLINNIPKKRSYPEFWF 178          
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Match: A0A7S1VY98_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VY98_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 9.970e-16
Identity = 60/182 (32.97%), Postives = 93/182 (51.10%), Query Frame = 2
Query: 1193 YGSTAKPVKMKKMPLLEACVTWVGTFCGIGATQVAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVLFAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGALSIIFVGAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPEYW 1738
            YG   +P      P      +   TF G+ AT  A    ++ V+       + +   FGAL TL Y L AAP +QPR ++    LGM+ G+ +  S    + +WL+++L+A++ +  M  +G IHPP GAL+I+F  A NNT           + L G  + I++A  +N+LS  R YP +W
Sbjct:   67 YGGNVQPP-----PAASWIQSLFNTF-GVFATISAITNFSNGVSNATNSKAYAIMPVFGALVTLQYGLTAAPPSQPRNIILGQFLGMSIGMAI--SKAASLELWLRQSLSAALVVGCMSKLGTIHPPGGALAIVF-SAGNNTWNQVG------THLAGDVIAIAIAAWINNLSYIRQYPTFW 233          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9856.1.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ49_ECTSI4.550e-5931.02HPP family protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A7S4CNL2_9EUGL1.080e-3747.16Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7S3HJK6_9STRA2.390e-3726.83Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S0UCK6_HEMAN9.220e-2037.63Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7V6X1J0_9FIRM1.050e-1734.34HPP family protein n=1 Tax=Clostridia bacterium Ta... [more]
UPI0013D15E962.790e-1734.43HPP family protein n=1 Tax=Desulfopila sp. IMCC350... [more]
A0A830I2A8_9CHLO1.300e-1634.21Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
A0A7K3NPT4_9DELT1.300e-1636.53HPP family protein n=2 Tax=root TaxID=1 RepID=A0A7... [more]
A0A1M7YCV1_9DELT3.290e-1635.14HPP family protein n=1 Tax=Desulfopila aestuarii D... [more]
A0A7S1VY98_9STRA9.970e-1632.97Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9856contigC-tenellus_contig9856:2..4552 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog765912.Thimo_3367
PFAMsHPP
Model size2815
Max annot lvl135613|Chromatiales
Hectar predicted targeting categoryother localisation
Exons7
Evalue5.77e-21
EggNOG OGsCOG3448@1|root,COG3448@2|Bacteria,1MXJG@1224|Proteobacteria,1RYFC@1236|Gammaproteobacteria,1WWC0@135613|Chromatiales
DescriptionPFAM HPP family
Cds size1665
COG categoryT
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9856.1.5prot_C-tenellus_contig9856.1.5Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9856 1070..4470 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790204.6725168-UTR-C-tenellus_contig9856:1..10691680790204.6725168-UTR-C-tenellus_contig9856:1..1069Choristocarpus tenellus KU2346UTRC-tenellus_contig9856 2..1069 -
1680790204.7655919-UTR-C-tenellus_contig9856:4470..45521680790204.7655919-UTR-C-tenellus_contig9856:4470..4552Choristocarpus tenellus KU2346UTRC-tenellus_contig9856 4471..4552 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790204.6849883-CDS-C-tenellus_contig9856:1069..11831680790204.6849883-CDS-C-tenellus_contig9856:1069..1183Choristocarpus tenellus KU2346CDSC-tenellus_contig9856 1070..1183 -
1680790204.6963108-CDS-C-tenellus_contig9856:1637..19341680790204.6963108-CDS-C-tenellus_contig9856:1637..1934Choristocarpus tenellus KU2346CDSC-tenellus_contig9856 1638..1934 -
1680790204.7117-CDS-C-tenellus_contig9856:2347..27501680790204.7117-CDS-C-tenellus_contig9856:2347..2750Choristocarpus tenellus KU2346CDSC-tenellus_contig9856 2348..2750 -
1680790204.7241042-CDS-C-tenellus_contig9856:2956..32651680790204.7241042-CDS-C-tenellus_contig9856:2956..3265Choristocarpus tenellus KU2346CDSC-tenellus_contig9856 2957..3265 -
1680790204.7327888-CDS-C-tenellus_contig9856:3404..36851680790204.7327888-CDS-C-tenellus_contig9856:3404..3685Choristocarpus tenellus KU2346CDSC-tenellus_contig9856 3405..3685 -
1680790204.7453566-CDS-C-tenellus_contig9856:4043..42841680790204.7453566-CDS-C-tenellus_contig9856:4043..4284Choristocarpus tenellus KU2346CDSC-tenellus_contig9856 4044..4284 -
1680790204.754387-CDS-C-tenellus_contig9856:4450..44701680790204.754387-CDS-C-tenellus_contig9856:4450..4470Choristocarpus tenellus KU2346CDSC-tenellus_contig9856 4451..4470 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9856.1.5

>prot_C-tenellus_contig9856.1.5 ID=prot_C-tenellus_contig9856.1.5|Name=mRNA_C-tenellus_contig9856.1.5|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=555bp
MLASFSRSQSVGNLAKSGNDEPARTPLLKPGHRSVSPSGTFAPMQRNPNV
VDIGAEGEKNVVEDIESGRKHDILITHRFVPLIPPVQKMLETVCSDLDAY
GESFVPNEGNGHTLVHCCSFIPERVNDQTDADLVHFSRNANTETYAKRIG
LPGITWATETPALHDIKAMVVDPCCNPGGSRLKQASMLFHTALTIPLIID
RGGTKIQKGGFSQSLGVLVVYLPTPQNHISALMTYAESIAGAAQRVSQLM
MHRALFIEGRRNRLQRNMRVMKIALYFLMPMLIRYHNRTGDQVTDTFEFL
ELKSDTPPMAEQIIQRRSPHRSPVIGGKVLSYTRRPSWMRLSDIDTSTAV
LKRERSSAGLASARLLDLLTYGSTAKPVKMKKMPLLEACVTWVGTFCGIG
ATQVAFDILNSAVAWNGQGDLFYLTGSFGALATLLYALPAAPLAQPRTVL
FAHLLGMACGVGVIYSFPCGVMVWLQKALAASMTISAMGLMGVIHPPAGA
LSIIFVGAANNTATNEQVVMLVLSVLFGLGMHISVAIGLNHLSSKRSYPE
YWWE*
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mRNA from alignment at C-tenellus_contig9856:2..4552-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9856.1.5 ID=mRNA_C-tenellus_contig9856.1.5|Name=mRNA_C-tenellus_contig9856.1.5|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4551bp|location=Sequence derived from alignment at C-tenellus_contig9856:2..4552- (Choristocarpus tenellus KU2346)
GTAAGAGTTGTACAGACATCTGGCGATGTAGCCTTAGCAACCCCCTCCCC TTTCACCTCCCACCTTCATCAATTTGACGATCATGTTGGCGAGTTTTTCG AGGTTTGTGCTTTCTTCCGACATAATCCTGAATTGGGGTGGCAATTATCG ACAATACTTCCCATGCCCCACCCTTTTGAGTTCATTACAGTTACGTCCAA CGAATTGCTAGTTTCCCCTCCCTGACATGCCCCACCTGGTGCACACCTCA CTTCTTGATTGTGAGCAGGTCTCAAAGTGTTGGCAATCTGGCGAAGAGTG GGAATGACGAGCCAGCCAGAACGCCACTCCTCAAACCAGGTCACCGAAGC GTGTCTCCCTCTGGCACCTTCGCACCCATGCAACGGAATCCGAACGTAGT GGACATTGGCGCCGAAGGCGAAAAAAATGTTGTGGAAGATATCGAAAGCG GTCGAAAGCACGATATTCTGATCACTCACCGTTTCGTCCCACTAATTCCT CCTGTACAGGCAAGAGTTGATTGTTTCTGTCTAGATGGACTCTGGAGTGT GCATGAGAATAGGGGGAGAGTGCTTGGGGGATGATATGCCCTCCCCATAC TCTTTTCTGGGATTGTTTGCGTGTCACGGGCGAAATTAGTTGGGCCTCGG CTTCAATACCACCTATGGTCACTTTTTCTGACTCATCACCAGGAGACAAC ACAACAGTTCTGTAGCTTATGTACAGCCTCTGAAGTATCATCTCACCATC CCGAGAGGAAAAAGAAATCCCTCCCTGTACCTTGCATTTTTCCATGTTTC GTCCCCACGCTATCTAAGAAATATTTCTTCCTAACCAGATGTTTTATATT TCCTCCTGTGTAAACAGAAAATGCTCGAGACGGTTTGCTCCGATCTTGAC GCGTATGGAGAGTCCTTTGTCCCGAACGAAGGAAATGGGCACACGCTTGT CCACTGCTGCTCCTTCATCCCTGAGAGAGTCAACGATCAGACTGATGCCG ACCTTGTTCATTTCAGTCGAAACGCCAACACAGAGACATACGCAAAGCGG ATTGGCTTGCCTGGGATCACTTGGGCAACTGAAACACCAGCTTTACACGA CATCAAGGCAATGGTGGTAGATCCTTGCTGTAACCCAGGGGGCAGCAGGC AAGATTTCGACATATTTTTGCTTTTCCTTCTTTTGGCTCGAGATATATCC TGCGCTTGTCGAGGTATTTGACATGGGCGTCACAGACTGCTCTACTCTGC ACTAAGTGTCCCACAATTTTGTTGTCACTCTTTGCAGACTCAAACAGGCC TCCATGCTCTTCCACACAGCCTTGACAATTCCACTCATCATAGACCGTGG TGGCACTAAAATCCAAAAGGGTGGCTTCAGTCAGTCTTTGGGTGTCTTGG TGGTTTATCTACCAACTCCACAGAACCACATCTCAGCCCTAATGACATAC GCAGAAAGTATCGCTGGGGCAGCACAGCGGGTTTCCCAACTCATGATGCA CCGTGCTCTCTTCATTGAGGGCCGGCGGAATCGCCTCCAAAGGAACATGC GGGTCATGAAAATTGCTTTGTATTTTCTCATGCCTATGCTCATCAGGTCA GAGCCCTGGACACATGCTTTTAGTTTCATAGACTGCCAACACATATAAAT GGCAAGTTTCCCAAAGTGGTGTTGAGTATTGAGTGAATTTGGGATGAAGG CAGGGAGCCATCAACTGAACTCTACAAACTGTCCCAGATTTTGGTTTGTG TGCCGTATGTTACTGCCCCATGTCTTATACTCCCACACTTGCGACACCAC AGGTACCACAATAGAACAGGAGACCAGGTGACAGATACTTTTGAGTTTCT AGAACTAAAGAGTGATACACCACCTATGGCAGAACAGATTATTCAACGAA GGTCACCACATAGGAGTCCAGTCATTGGTGGTAAAGTTTTAAGCTACACT AGAAGACCTTCGTGGATGAGACTGTCGGATATTGACACCTCCACTGCTGT TCTTAAGAGGGAGAGATCTTCTGCTGGTTTGGCCTCCGCCCGGTTGCTTG ACCTGCTGACATACGGGTCAACTGCCAAGCCGGTCAAGATGAAGAAGATG CCCCTACTTGAGGCTTGTGTGACATGGGTGGGAACATTTTGTGGTATTGG TGCTACGCAGGTGGCATTTGATATACTCAACAGCGCTGTTGCATGGAATG GACAGGTGAGCTGTCCCAGGAGTACAAATCAGCTTTGATTTGCAGTGTCT TCAAGGATTGGAGAAAGGTCATTCATGAAGCAGGACTCATATTTCCTTGT ACCCCCCACCTATGCAGCATCCTGTGTAGGTAATGTTTACTTGATGTGGA GTCAAAGTGTGACGATCACATTATGTGGATGCACTTCTGCTGAGGTGTTA ACTTCAACTTCACAGGAAATCCTATCCTACCACCTTGCTCACCTAGTGTT TCATGATCAAGATCTCCATCCGTAGGGATAATTACAAATGACACAAATCT CCTACATCTGCGTTCTGCTTCACCTCTACAGCATGTCACAGACTGCCCCC ATTACATGCTCAATACCATCCATGTAAGGCATTGACAGCGAACATATTGT TTCTCTTTTCCCCTTCAGGGGGACCTGTTTTACCTTACAGGTTCATTTGG TGCCTTGGCCACCTTGCTCTATGCTCTACCTGCAGCCCCGTTGGCCCAGC CCCGGACAGTGCTTTTTGCGCACCTTTTGGGGATGGCATGTGGGGTGGGG GTAATCTATAGCTTTCCGTGTGGGGTGATGGTGTGGCTACAGAAAGCACT GGCTGCATCCATGACAATCTCTGCTATGGGGTTGATGGGAGTCATCCACC CTCCTGCTGGAGCATTGTCCATCATATTCGTCGGTGCTGCGAACAACACA GCAACAAATGAACAGGTGAGAAGAGCATGCCATTTGCCATTTGCTGAGGT CCATTGAGCAAAGAAGGCCCGGATTAACTTGACCAATGATAATATATACT GGCCCTTGTCATTAAGGTCGGTTGTAATGCCATTGGGTGTGGGTGTATTT TTTACACAGCTTGCAATTGTGGATTCTTAAAGTATCAAAACATGAAGGTG GGTGAGAGGACCACATACAACAAACCCACAACGTGCTCAGCTCTCTTTCA TGCAACTTTGTGGCATAGATCTCACAGTTCTTTGCACCCACACATATTTC ATGCCATATCTGTAAACACCATTGATCGGTCCATCCAAAGTTCTGTAAGG TGGGTTGTCCTTGGTTGTGGTGGAGGTGCCTGATAATCTATGTTGTTCCG ATCCTGTTATTTCATTCGACTGTTGTCATGCCATTTCCTGCTTCCTTGTC TTTCAAATGATATTTGCAGGTGGTGATGCTGGTCTTGTCAGTTCTGTTTG GATTGGGCATGCACATCTCAGTGGCTATTGGACTCAACCACTTATCTTCT AAGCGTTCTTACCCTGAGTATTGGTGGGAATAGGGAGTAGCTGTGCATTT ATTTTTGCCCAACAGAATTTTAAGCACCTCCAATCTGTTGATGAAGGTAT GTATAGGTTGACTGTGTTCACTTGGACAGTGATGGACAGATTTGCAAAAA GGTGACAATGTGTGCTGGTTGTGAAAATATTGAGGGGTATTCTAGGTGTT TTTGACCCACTTATGATACACACTTACATCCAATGGTGCAAGTTCCTTTG CAAGAGATATGGTTTTGTTTCTTACAAGTCAAAAAATCTGCTTGATCATT GGTCCTAGTCCTTCATTTCGATTTTTAGGTTTCCCTCTTTAAACAATAGG AGAGATCATCGCCTGCAGTGTGACAGGGGTGATGAAGTTTGTCCAGGAAG CATTATTAGGGGATTGGAATGTTGCGATAAGTGTTTTTACTGGTAACTGA GGCAGTGAGAGTGAAACGTTTTTGGTGTGTAGATATGTATCTATCAGTAG ACAATGATATAGAGAGATTGCCTTGCATTGAGTAGGTCAATTGGTGCTCT TCCTTTTTTGTTTGTCCCTTTCTGCCTGAGGATGTCATCACAGTTCCATG AATCAAGCGCCATTTTTTTATTGGGAGGGTGTTCTCACTGCATAGAGTCT TAAATTTTTTTGAGTGTATACCTGGTACTTGTGGTTTGTTGATGTAGGAA ATGCAATAGGGGAGGGGAGGGTCATCGTAACTGAAAGGCATGTTTTGTTT TTGTTTCTGAAGTAGTTCTGAGTTGTGCCCACTGTTGAGAATATTCAATA TTGCTGTAGTTACCACCTTACACTTTTGCTTGTTTTGTAGGTAGGCTCTC AATTGACATGGTCAAGATACTGTCAAGCCCATTGGGACCGTTGTTCTAGA AGCAGAAAGTTGTTTGAATTTGGTGTGATTGCCCTGTCTCGCATCCAGCT TTCTGTAAGGGTTTTCGCGTTTCGTTGTGTGGCACGGTATGATCATGCAT GAAACCATGGACAGTGTATGTTTCTTGTATCGAGCCAAAGTATCTTAGAG GGTAGAGCCGCGTCCATTTGGGGATCAAAATACAATGTTGTGATTTTGAT G
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Coding sequence (CDS) from alignment at C-tenellus_contig9856:2..4552-

>mRNA_C-tenellus_contig9856.1.5 ID=mRNA_C-tenellus_contig9856.1.5|Name=mRNA_C-tenellus_contig9856.1.5|organism=Choristocarpus tenellus KU2346|type=CDS|length=1665bp|location=Sequence derived from alignment at C-tenellus_contig9856:2..4552- (Choristocarpus tenellus KU2346)
ATGTTGGCGAGTTTTTCGAGGTCTCAAAGTGTTGGCAATCTGGCGAAGAG
TGGGAATGACGAGCCAGCCAGAACGCCACTCCTCAAACCAGGTCACCGAA
GCGTGTCTCCCTCTGGCACCTTCGCACCCATGCAACGGAATCCGAACGTA
GTGGACATTGGCGCCGAAGGCGAAAAAAATGTTGTGGAAGATATCGAAAG
CGGTCGAAAGCACGATATTCTGATCACTCACCGTTTCGTCCCACTAATTC
CTCCTGTACAGAAAATGCTCGAGACGGTTTGCTCCGATCTTGACGCGTAT
GGAGAGTCCTTTGTCCCGAACGAAGGAAATGGGCACACGCTTGTCCACTG
CTGCTCCTTCATCCCTGAGAGAGTCAACGATCAGACTGATGCCGACCTTG
TTCATTTCAGTCGAAACGCCAACACAGAGACATACGCAAAGCGGATTGGC
TTGCCTGGGATCACTTGGGCAACTGAAACACCAGCTTTACACGACATCAA
GGCAATGGTGGTAGATCCTTGCTGTAACCCAGGGGGCAGCAGACTCAAAC
AGGCCTCCATGCTCTTCCACACAGCCTTGACAATTCCACTCATCATAGAC
CGTGGTGGCACTAAAATCCAAAAGGGTGGCTTCAGTCAGTCTTTGGGTGT
CTTGGTGGTTTATCTACCAACTCCACAGAACCACATCTCAGCCCTAATGA
CATACGCAGAAAGTATCGCTGGGGCAGCACAGCGGGTTTCCCAACTCATG
ATGCACCGTGCTCTCTTCATTGAGGGCCGGCGGAATCGCCTCCAAAGGAA
CATGCGGGTCATGAAAATTGCTTTGTATTTTCTCATGCCTATGCTCATCA
GGTACCACAATAGAACAGGAGACCAGGTGACAGATACTTTTGAGTTTCTA
GAACTAAAGAGTGATACACCACCTATGGCAGAACAGATTATTCAACGAAG
GTCACCACATAGGAGTCCAGTCATTGGTGGTAAAGTTTTAAGCTACACTA
GAAGACCTTCGTGGATGAGACTGTCGGATATTGACACCTCCACTGCTGTT
CTTAAGAGGGAGAGATCTTCTGCTGGTTTGGCCTCCGCCCGGTTGCTTGA
CCTGCTGACATACGGGTCAACTGCCAAGCCGGTCAAGATGAAGAAGATGC
CCCTACTTGAGGCTTGTGTGACATGGGTGGGAACATTTTGTGGTATTGGT
GCTACGCAGGTGGCATTTGATATACTCAACAGCGCTGTTGCATGGAATGG
ACAGGGGGACCTGTTTTACCTTACAGGTTCATTTGGTGCCTTGGCCACCT
TGCTCTATGCTCTACCTGCAGCCCCGTTGGCCCAGCCCCGGACAGTGCTT
TTTGCGCACCTTTTGGGGATGGCATGTGGGGTGGGGGTAATCTATAGCTT
TCCGTGTGGGGTGATGGTGTGGCTACAGAAAGCACTGGCTGCATCCATGA
CAATCTCTGCTATGGGGTTGATGGGAGTCATCCACCCTCCTGCTGGAGCA
TTGTCCATCATATTCGTCGGTGCTGCGAACAACACAGCAACAAATGAACA
GGTGGTGATGCTGGTCTTGTCAGTTCTGTTTGGATTGGGCATGCACATCT
CAGTGGCTATTGGACTCAACCACTTATCTTCTAAGCGTTCTTACCCTGAG
TATTGGTGGGAATAG
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