mRNA_C-tenellus_contig9851.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9851.2.1 vs. uniprot
Match: A0A7C2KFL5_9SPIR (DDE Tnp4 domain-containing protein n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A7C2KFL5_9SPIR) HSP 1 Score: 64.7 bits (156), Expect = 3.860e-12 Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 1 Query: 1 LDRCCKIFRITKGVYRGKHKNHGKVWNLIAGLVNLRY 111 ++R CKIFRI K YRGKHKN+GK WN++A LVNLRY Sbjct: 92 INRRCKIFRIVKETYRGKHKNYGKTWNVVAALVNLRY 128
BLAST of mRNA_C-tenellus_contig9851.2.1 vs. uniprot
Match: A0A2S5CFM7_9GAMM (IS5/IS1182 family transposase n=10 Tax=Methylovulum psychrotolerans TaxID=1704499 RepID=A0A2S5CFM7_9GAMM) HSP 1 Score: 63.2 bits (152), Expect = 4.720e-12 Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 1 Query: 1 LDRCCKIFRITKGVYRGKHKNHGKVWNLIAGLVNLRYGE 117 ++R CKIFRI K VYRGKHKN+ W+L+A LVNLRYG Sbjct: 41 VNRRCKIFRIVKDVYRGKHKNYSLTWSLVAALVNLRYGN 79
BLAST of mRNA_C-tenellus_contig9851.2.1 vs. uniprot
Match: UPI001E4CFCE2 (transposase n=1 Tax=Methylovulum psychrotolerans TaxID=1704499 RepID=UPI001E4CFCE2) HSP 1 Score: 63.2 bits (152), Expect = 7.370e-12 Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 1 Query: 1 LDRCCKIFRITKGVYRGKHKNHGKVWNLIAGLVNLRYGE 117 ++R CKIFRI K VYRGKHKN+ W+L+A LVNLRYG Sbjct: 59 VNRRCKIFRIVKDVYRGKHKNYSLTWSLVAALVNLRYGN 97
BLAST of mRNA_C-tenellus_contig9851.2.1 vs. uniprot
Match: A0A7C2KIY6_9SPIR (IS5/IS1182 family transposase n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A7C2KIY6_9SPIR) HSP 1 Score: 61.6 bits (148), Expect = 7.880e-12 Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 1 Query: 1 LDRCCKIFRITKGVYRGKHKNHGKVWNLIAGLVNLRY 111 ++R CKIFRI K YRGKHKN+ K WN++A LVNLRY Sbjct: 4 INRRCKIFRIVKETYRGKHKNYRKTWNVVAALVNLRY 40
BLAST of mRNA_C-tenellus_contig9851.2.1 vs. uniprot
Match: UPI001FAD84FE (transposase n=3 Tax=Methylobacter sp. S3L5C TaxID=2839024 RepID=UPI001FAD84FE) HSP 1 Score: 62.8 bits (151), Expect = 2.000e-11 Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 1 Query: 1 LDRCCKIFRITKGVYRGKHKNHGKVWNLIAGLVNLRYG 114 ++R CKIFRI K VYRGKHK++ WNL+A LVNLRYG Sbjct: 87 VNRRCKIFRIAKDVYRGKHKHYSLTWNLVAALVNLRYG 124
BLAST of mRNA_C-tenellus_contig9851.2.1 vs. uniprot
Match: UPI00037B4950 (IS5/IS1182 family transposase n=1 Tax=Methylovulum miyakonense TaxID=645578 RepID=UPI00037B4950) HSP 1 Score: 62.4 bits (150), Expect = 2.900e-11 Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 1 Query: 1 LDRCCKIFRITKGVYRGKHKNHGKVWNLIAGLVNLRY 111 ++R CKIFRI K VYRGKHKN+ WNL+A LVNLRY Sbjct: 88 VNRRCKIFRIVKDVYRGKHKNYSLTWNLVAALVNLRY 124
BLAST of mRNA_C-tenellus_contig9851.2.1 vs. uniprot
Match: UPI001E5D9B12 (transposase n=1 Tax=Methylovulum psychrotolerans TaxID=1704499 RepID=UPI001E5D9B12) HSP 1 Score: 57.8 bits (138), Expect = 5.650e-10 Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 1 Query: 1 LDRCCKIFRITKGVYRGKHKNHGKVWNLIAGLVNLR 108 ++R CKIFRI K VYRGKHKN+ W+L+A LVNLR Sbjct: 40 VNRRCKIFRIVKDVYRGKHKNYSLTWSLVAALVNLR 75
BLAST of mRNA_C-tenellus_contig9851.2.1 vs. uniprot
Match: A0A0S6VT88_9BACT (Transposase, IS4 family protein n=1 Tax=Candidatus Moduliflexus flocculans TaxID=1499966 RepID=A0A0S6VT88_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 2.290e-9 Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 1 Query: 1 LDRCCKIFRITKGVYRGKHKNHGKVWNLIAGLVNLRY 111 ++R CKIFRI K YRGKHK+ G W+LIAGLVNLRY Sbjct: 240 VNRRCKIFRIVKETYRGKHKHIGLTWHLIAGLVNLRY 276
BLAST of mRNA_C-tenellus_contig9851.2.1 vs. uniprot
Match: G3IXG0_METTV (Transposase n=2 Tax=Methylobacter tundripaludum (strain ATCC BAA-1195 / DSM 17260 / SV96) TaxID=697282 RepID=G3IXG0_METTV) HSP 1 Score: 59.7 bits (143), Expect = 2.300e-9 Identity = 24/37 (64.86%), Postives = 29/37 (78.38%), Query Frame = 1 Query: 1 LDRCCKIFRITKGVYRGKHKNHGKVWNLIAGLVNLRY 111 ++R CK+FRI K VYRGKHKN+ W L+A LVNLRY Sbjct: 239 VNRRCKVFRIVKDVYRGKHKNYSLTWRLVAALVNLRY 275
BLAST of mRNA_C-tenellus_contig9851.2.1 vs. uniprot
Match: UPI001F4F8908 (hypothetical protein n=1 Tax=Pontibacter sp. E15-1 TaxID=2919918 RepID=UPI001F4F8908) HSP 1 Score: 53.5 bits (127), Expect = 7.830e-8 Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 1 Query: 1 LDRCCKIFRITKGVYRGKHKNHGKVWNLIAGLVNLR 108 ++R CKIFRI K YRGKH+N+G WNL+A + NL+ Sbjct: 78 VNRQCKIFRIVKDTYRGKHRNYGLNWNLVAAINNLK 113 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9851.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9851.2.1 >prot_C-tenellus_contig9851.2.1 ID=prot_C-tenellus_contig9851.2.1|Name=mRNA_C-tenellus_contig9851.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=43bp LDRCCKIFRITKGVYRGKHKNHGKVWNLIAGLVNLRYGESMI*back to top mRNA from alignment at C-tenellus_contig9851:4322..4450+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9851.2.1 ID=mRNA_C-tenellus_contig9851.2.1|Name=mRNA_C-tenellus_contig9851.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=129bp|location=Sequence derived from alignment at C-tenellus_contig9851:4322..4450+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9851:4322..4450+ >mRNA_C-tenellus_contig9851.2.1 ID=mRNA_C-tenellus_contig9851.2.1|Name=mRNA_C-tenellus_contig9851.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=129bp|location=Sequence derived from alignment at C-tenellus_contig9851:4322..4450+ (Choristocarpus tenellus KU2346)back to top |