mRNA_C-tenellus_contig984.5.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig984.5.1 vs. uniprot
Match: D8LKT4_ECTSI (DUF202 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKT4_ECTSI) HSP 1 Score: 247 bits (631), Expect = 1.070e-78 Identity = 140/270 (51.85%), Postives = 175/270 (64.81%), Query Frame = 1 Query: 25 HRRRSPAALNSKKTLFVRFEGRDNEVSWYPGASDASISRGVDLALQIPTGTGVIVRDPQDGSVLAISDSLPDRLHVNA-----------ERTVVQERVQSIVGGGKPVGDGLGSAAREERHDGEG------------------KEFRGELLKFERINAHLANERTWLAWVRTALSVLTMALSLLSLTDDL-SSSIKILGVLLGVAFVVCTLFTYFTGWLRYSRVKEVLAWRGTQVKAKLGRFGLSYQARFLGIALACAVPLYVFGGVNVI 744 HR + SKK + VR+EGR++ VSW+ GASD +I+R ++LAL++P GT +VRDP+DGS LA+SDSLPD L V+A +R + G G+ G+ S A+ HD G EFRGELLKFER+NAHLANERTWLAWVRTALSVL +ALSL+SLTDD+ S+++ + LGVAFV CTLFTY TGWLRY+RVKEVL W G+QVK + GRFGL Y FLG +L VP+Y GVNV+ Sbjct: 6 HRTGGTLDVGSKKAITVRYEGREHAVSWFAGASDEAITRTIELALRLPRGTPAVVRDPEDGSALAVSDSLPDGLTVDATAVPACSGGDNDRRRAESSGNGFYGRGES-GNNKNSDAKP-AHDSAGGIGXXXXXXXXXXXXXAAHEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIAGVNVV 273
BLAST of mRNA_C-tenellus_contig984.5.1 vs. uniprot
Match: A0A7S2Y0E1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E1_9STRA) HSP 1 Score: 172 bits (437), Expect = 7.890e-50 Identity = 100/238 (42.02%), Postives = 141/238 (59.24%), Query Frame = 1 Query: 58 KKTLFVRFEGRDNEVSWYPGASDASISRGVDLALQIPTGTGVIVRDPQDGSVLAISDSLPDRLHVNAERTVVQERVQSIVGGGKPVGDGLGSAAREERHDGE--------------GKEFRGELLKFERINAHLANERTWLAWVRTALSVLTMALSLLSLTDDLSS-SIKILGVLLGVAFVVCTLFTYFTGWLRYSRVKEVLAWRGTQVKAKLGRFGLSYQARFLGIALACAVPLYVF 726 KK+ + F + ++W+PGA+DAS+ R V A +P + ++ DP DG ++A+S++LP L +N + Q R P +G + E D E GK+FRGELLKFER+NAHLANERT+LAWVRTALSVL+ A S+ SLT+D S + K++ + G +VV LFTY TGW+RYS+V+ +L ++VKA+ GRFGLS+ A+FL Y F Sbjct: 10 KKSAVLAFGQKKESITWFPGATDASLHRLVLDAFSLPLHSRFLLVDPADGCIVALSENLPSGLVLNVQHVQTQGR-------DTPAKEGQAYTSAREDRDSEKSGGLESGDDESSTGKKFRGELLKFERVNAHLANERTFLAWVRTALSVLSSAFSIDSLTEDFSDGAFKVMVFIFGCLYVVGVLFTYTTGWVRYSQVRAILGLPASKVKAQFGRFGLSHVAKFLAFLFLFTAIGYCF 240
BLAST of mRNA_C-tenellus_contig984.5.1 vs. uniprot
Match: A0A7S3YD22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD22_HETAK) HSP 1 Score: 163 bits (413), Expect = 3.080e-46 Identity = 94/234 (40.17%), Postives = 138/234 (58.97%), Query Frame = 1 Query: 40 PAALNSKKTLFVRFEGRDNEVSWYPGASDASISRGVDLALQIPTGTGVIVRDPQDGSVLAISDSLPDRLHVNAERTVVQERVQSIVGGGKPVGDGLGSAAREERHDGEG-----KEFRGELLKFERINAHLANERTWLAWVRTALSVLTMALSLLSLTDDLSSSIKILGVLLGVAFVVCTLFTYFTGWLRYSRVKEVLAWRGTQVKAKLGRFGLSYQARFLGIALACAVPLYVF 726 P +K+T+ VR + +SWY G +D + + + + +P+ T I+ D D + +A+S SLP + + + E S + V + S +E DG+G +EF+GELLKFER+NAHLANERTWLAWVRTAL+VL+ A + L LT+D +S +I +LG ++ L TY TGWLRY++V+E+L G+ +K K RFGLS+QAR+L + L Y F Sbjct: 7 PNCKMAKRTISVRSGRKTERISWYDGTTDEGLEKLIADSFSLPSKTRFILIDSADNTTIALSSSLPSGIELQIQPL---EGDPSFDEQRRGVLNKKASPDPDEAADGDGSGLQGQEFQGELLKFERVNAHLANERTWLAWVRTALAVLSSAFTFLGLTEDFASGTQIFVFVLGGFYIGNVLLTYGTGWLRYAQVREILGLPGSMIKPKFNRFGLSHQARYLAVLLLVTGVSYWF 237
BLAST of mRNA_C-tenellus_contig984.5.1 vs. uniprot
Match: A0A7S2FKJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKJ2_9STRA) HSP 1 Score: 157 bits (396), Expect = 2.630e-44 Identity = 92/211 (43.60%), Postives = 133/211 (63.03%), Query Frame = 1 Query: 55 SKKTLFVRFEGRDNEVSWYPGASDASISRGVDLALQIPTGTGVIVRDPQDGSVLAISDSLPDRLHVNAERTVVQERVQSIVGGGKPVGDGLGSAAREERHDGEGKEFRGELLKFERINAHLANERTWLAWVRTALSVLTMALSLLSLTDDLSSSIKILGVLLGVAFVVCTLFTYFTGWLRYSRVKEVLAWRGTQVKAKLGRFGLSYQARFL 687 ++KT+ VR G++ V W+ GASD SI + AL + + ++ RD DG+V+A+S ++P L T+V + S+ P ++A + + FRG++LKFER+ AHLANERTWLAWVRTALS LT+A SLL+L+DD SS+ ++ ++G V LFT+ TGWLRY RVK+VL +++ GRFGLS+QARF+ Sbjct: 3 ARKTVVVRGHGKEATVGWFEGASDESIKTSITSALLMKADS-IVARD-LDGNVVAVSQAMPSGL------TLVVDPSDSV-----PTTTTARASAEQRTLN-----FRGQVLKFERVQAHLANERTWLAWVRTALSALTIAFSLLTLSDDASSASQLALFVMGSCMVANVLFTFVTGWLRYVRVKDVLMLTRSEMSENFGRFGLSHQARFM 195
BLAST of mRNA_C-tenellus_contig984.5.1 vs. uniprot
Match: A0A7S2WVC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVC3_9STRA) HSP 1 Score: 145 bits (365), Expect = 4.320e-39 Identity = 95/230 (41.30%), Postives = 133/230 (57.83%), Query Frame = 1 Query: 46 ALNSKKTLFVRFEGRDNEVSWYPGASDASISRGVDLALQIPTGTGVIVRDPQDGSVLAISDSLPDRLHVNAERTVVQERVQSIVGGGKPVGDGLGSAAREERHDGEGKEFRGELLKFERINAHLANERTWLAWVRTALSVLTMALSLLSLTDDLSSS-IKILGVLLGVAFVVCTLFTYFTGWLRYSRVKEVLAWRGTQVKAKLGRFGLSYQARFLGIALACAVPLYVFGG 732 A+ + + R GR V+WYPG+S AS+ + + AL I RD + G V+A+SD+LPD TV+ + S + G A R FRG++LKFER+ AHLANERTWLAWVRTAL+ L+++ +LL+L+DD + + + ++G VV LFT+ TGWLRY RVK+VL R ++ + GRFGLS+ ARFL AL A+ + GG Sbjct: 18 AVRRQVEVVDRSSGRRAVVAWYPGSSTASLLQSMVSALGIADDRPRCPRD-ESGRVVALSDTLPDA-------TVLYMDLVSETPTPSSPAEPTGPAKPNLRLSA----FRGQVLKFERVQAHLANERTWLAWVRTALAALSISFTLLTLSDDATKDWLALFLFVVGCLMVVNVLFTFITGWLRYVRVKDVLMLRKQEMSDEFGRFGLSHHARFLS-ALLVAISIAYLGG 234
BLAST of mRNA_C-tenellus_contig984.5.1 vs. uniprot
Match: A0A7S2GM95_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GM95_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.830e-34 Identity = 82/202 (40.59%), Postives = 115/202 (56.93%), Query Frame = 1 Query: 130 SISRGVDLALQIPTGTGVIVRDPQDGSVLAISDSLPDRLHVNAERTVVQERVQSIVGGGKPVGDGLGSAAREERHDGEGKEFRGELLKFERINAHLANERTWLAWVRTALSVLTMALSLLSLTDDLSSS-IKILGVLLGVAFVVCTLFTYFTGWLRYSRVKEVLAWRGTQVKAKLGRFGLSYQARFLGIALACAVPLYVFGG 732 SI R + +L+ G +V +G+V+A+S SLP+ + E V + + + V KP + FRG++LKFER+ AHLANERTWLAWVRTALS L++A SLL+L+D+ + +K+ ++G V L T+ TGWLRY RVK+VL + A GR GLS+QARFL + L Y+ GG Sbjct: 1 SIYRSIASSLKYDVLKGTLVARDNEGNVVALSSSLPNGTELTVEE--VDKCLVNNVRSSKPT-------------EKASMAFRGQVLKFERVQAHLANERTWLAWVRTALSALSIAFSLLTLSDESTKQWLKVTLFVVGSLMVANVLMTFVTGWLRYVRVKDVLMLDKQDMSANFGRLGLSHQARFLSLLLFVISFAYITGG 187
BLAST of mRNA_C-tenellus_contig984.5.1 vs. uniprot
Match: F0YI70_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI70_AURAN) HSP 1 Score: 126 bits (316), Expect = 3.870e-32 Identity = 79/224 (35.27%), Postives = 116/224 (51.79%), Query Frame = 1 Query: 64 TLFVRFEGRDN-EVSWYPG--ASDASISRGVDLALQIPTGTGVIVRDPQDGSVLAISDSLPDRLHVNAERTVVQERVQSIVGGGKPVGDGLGSAAREERHDGEGKEFRGELLKFERINAHLANERTWLAWVRTALSVLTMALSLLSLTDDLSSS-IKILGVLLGVAFVVCTLFTYFTGWLRYSRVKEVLAWRGTQVKAKLGRFGLSYQARFLGIALACAVPLYV 723 T+ +R G + +V W+ +DA+I V AL + G ++ R P DGS +A+ +LPD L +N + R + FR +L+KFE I AHLANERTWLAWVRT+LS L++A SLL+L D S + ++ LLG F+V + TGWLRY+R+++VL +V A R G+ +QAR +G+ Y+ Sbjct: 8 TVKLRLHGTNGVDVRWFGAEWVTDAAIRSLVTKALGLLVGPDIVCRHPCDGSFVALGAALPDGLLLNVHVSAAGRRSTGV--------------------------FRKQLIKFENIQAHLANERTWLAWVRTSLSALSVAFSLLTLVGDSRESWLAVVLFLLGSGFIVSVFTAFLTGWLRYARIRDVLMLTKREVPAHFHRIGVRHQARLMGLLFIFLTATYL 205
BLAST of mRNA_C-tenellus_contig984.5.1 vs. uniprot
Match: A0A7S3K4A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4A5_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.370e-31 Identity = 77/228 (33.77%), Postives = 118/228 (51.75%), Query Frame = 1 Query: 58 KKTLFVRF--EGRDNEVSWYPGASDASISRGVDLALQIPTGTGVIVRDPQDGSVLAISDSLPDRLHVNAERTVVQERVQSIVGGGKPVGDGLGSAAREERHDGEGKEFRGELLKFERINAHLANERTWLAWVRTALSVLTMALSLLSLTDDLSSS-IKILGVLLGVAFVVCTLFTYFTGWLRYSRVKEVLAWRGTQVKAKLGRFGLSYQARFLGIALACAVPLYVFGG 732 + T++VR ++ ++ WY SD + + AL +PTGT +I +GSV+A++ ++PD + E + + FR +L+KFE I AHLANERT+LAW+RTAL+ L+++ SLL+L D S + + LG AFV T+ TGWLR++R++++L QV R GLS+QA F+ I LY+ GG Sbjct: 5 RTTVYVRLGLNEKEQKIGWYGKVSDDHVRSLITTALSVPTGTDIIASC--EGSVVALNSAIPDGTRLKVEPA----------------------------YSTPSRGFRRQLIKFENIQAHLANERTFLAWIRTALASLSISFSLLALVADASKNWLAACLYALGAAFVFSVFTTFLTGWLRFARIRDILMLAQNQVPTDFHRIGLSHQAYFIAILCGLLTFLYLVGG 202
BLAST of mRNA_C-tenellus_contig984.5.1 vs. uniprot
Match: A0A7S2G4H1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4H1_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.690e-21 Identity = 56/124 (45.16%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 373 FRGELLKFERINAHLANERTWLAWVRTALSVLTMALSLLSLTDDLSSSIKILGVL-LGVAFVVCTLFTYFTGWLRYSRVKEVLAWRGTQVKAKLGRFGLSYQARFLGIALACAVPL-YVFGGVN 738 F+ ++LKF+RINAHLANERTWLAW+RT S+L+ L+L + +D SS + +G A +V FTY TGW+RY +VKE+L + K+GR L YQ FL C V + Y GG + Sbjct: 58 FQKQMLKFDRINAHLANERTWLAWIRTTFSLLSCGLTLQTYANDSSSGTWHWWLFAVGCATIVSMDFTYMTGWIRYGKVKEILQQNKEVLGPKMGRLKLKYQT-FLVFGTLCTVAVVYWMGGYD 180
BLAST of mRNA_C-tenellus_contig984.5.1 vs. uniprot
Match: A0A7S2DFA2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFA2_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.350e-17 Identity = 67/230 (29.13%), Postives = 104/230 (45.22%), Query Frame = 1 Query: 100 VSWYPGASDASISRGVDLALQIPTGTG-------------VIVRDPQ-DGSVLAISDSLPDRL-----HVNAERTVVQERVQSIVGGGKPVGDGLGSAAREERHDGEGKEFRGELLKFERINAHLANERTWLAWVRTALSVLTMALSLLSLTDDLSS----SIKILGVLLGVAFVVCTLFTYFTGWLRYSRVKEVLAWRGTQVKAKLGRFGLSYQARFLGIALACAVPLY 720 ++WY G+S SI R +AL P G+ + DP S L + S + + + N+ V ++Q+I G P + +F+ + +KFER+ +HLANERTWLAW+R AL++L+ A ++ L D ++ +I + LG+ +V+ T GWLRY R K +L + G G+ QA LG L V Y Sbjct: 5 IAWYKGSSLNSIKRAASVALGHPPGSSDTLDIFEDEEMKRALPWDPSLSTSTLKVFSSSNESMCAWNDNANSVLQEVIHKMQNIPTVGLP----------------DDPQFQDQYVKFERVLSHLANERTWLAWIRAALTMLSSAFTIWKLYDSVNDKIHPTISLALYSLGLCYVLVVPLTVVVGWLRYERTKHILGLSKVDIHEYFGSLGVVIQAALLGSVLVFTVGCY 218 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig984.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig984.5.1 >prot_C-tenellus_contig984.5.1 ID=prot_C-tenellus_contig984.5.1|Name=mRNA_C-tenellus_contig984.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=251bp MLTGEGNLHRRRSPAALNSKKTLFVRFEGRDNEVSWYPGASDASISRGVDback to top mRNA from alignment at C-tenellus_contig984:13650..14622- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig984.5.1 ID=mRNA_C-tenellus_contig984.5.1|Name=mRNA_C-tenellus_contig984.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=973bp|location=Sequence derived from alignment at C-tenellus_contig984:13650..14622- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig984:13650..14622- >mRNA_C-tenellus_contig984.5.1 ID=mRNA_C-tenellus_contig984.5.1|Name=mRNA_C-tenellus_contig984.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=753bp|location=Sequence derived from alignment at C-tenellus_contig984:13650..14622- (Choristocarpus tenellus KU2346)back to top |