mRNA_C-tenellus_contig98.10.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE) HSP 1 Score: 407 bits (1045), Expect = 8.240e-126 Identity = 205/313 (65.50%), Postives = 255/313 (81.47%), Query Frame = 1 Query: 25 APLQLPAVLHASMAPLLFVQRINVGTLVVRATVLGHIPGKQVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTIGGGSGVMRPIAGTMSLVHRTSQSLIASTGVNSEWQHATPAAAANPVLCHLNTDLWYRWSLLPPDHDFLYQTQAMCSHASYSRADIPVMIILSNKSIFLYRGASGCEKLWMQIEHSDITLVEQGAEHVPAELILNTRAVRRPRHQFTGISAVAV 963 +P LP L A++ P LF+QR+++G LVVRATV G+IPGKQVF+ALDKS LL +PVSLRGV ARP+ IAE I SNYA DA+L+SLAVVGSL+A+GSPT LL+EWG+GVYDLF++PI+A+PQGP +T RA++ G+SSL+RH SAG LSSVSG++ LSR +GG GV+RPIAGTM LV+RTS+SLIASTGV+SEW HA AANP +LN DLWYR LLP H+FLY+T A+CS+ASYS+A++PV I+LS+K++FLYRG SGCE LW QI+H DITLVEQ AEH PAELILN R RRP+ + ++A V Sbjct: 4315 SPQLLPPALGANVVPRLFIQRVDIGALVVRATVQGYIPGKQVFLALDKSPLLFRPVSLRGVLARPDEIAEQIASNYAVDALLRSLAVVGSLEALGSPTTLLSEWGKGVYDLFAMPIKAMPQGPSSTFRATFRGVSSLLRHASAGTLSSVSGVSNALSRNLGGRGGVVRPIAGTMGLVYRTSKSLIASTGVDSEWTHAEANTAANPATAYLNADLWYRCCLLPAGHEFLYRTPALCSNASYSQANVPVTIVLSSKAVFLYRGGSGCETLWKQIDHQDITLVEQSAEHAPAELILNARGYRRPKSATSPLAAARV 4627
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: A0A7S1G5R3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G5R3_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 3.760e-13 Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 1 Query: 151 FVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQ-----GPFATLRASYL-GLSSLVRHGSAGALSSVSGLTATLSRTI 504 F+++D++ L L VSL V A PE +A + +NY ADA+L+S A+VGSL+ +G+PT + G G+ DLF+LP+ A+ G A + + G SL H + GALSSV+G +A LSR + Sbjct: 37 FLSVDEAPLALASVSLDCVRATPERLARELLANYIADAILRSPALVGSLELLGNPTRFMRGLGSGLRDLFALPMLAIRDREKGVGSGAGILTGFARGWGSLAAHVAEGALSSVAGFSAALSRNL 160
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: W7TJC5_9STRA (VPS13_C domain-containing protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJC5_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 5.000e-13 Identity = 57/156 (36.54%), Postives = 84/156 (53.85%), Query Frame = 1 Query: 40 PAVLHAS-MAPLLFVQRINVGTLVVRATVLGHIPGKQVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 504 PAVL + P F Q + L V +PG +VF+ LD S L + V L VF+ P+A + I SNY ADA+ +S A++GSL+ IGSP IL++ G+ DL L +L + GL SL RH G L+S++G ++++ R + Sbjct: 3437 PAVLTENDQTPCTFFQSVTFSPLSVLLDARVFVPGSRVFLGLDGSPLFFEGVRLTDVFSTPQAFLKGILSNYVADAIFRSPALLGSLEIIGSPAILVSRVVSGLKDLVMLSASG-------SLTGAGRGLLSLTRHVVGGTLASLAGFSSSVRRNL 3585
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: A0A4D9D6P0_9STRA (VPS13_C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6P0_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.460e-12 Identity = 57/156 (36.54%), Postives = 84/156 (53.85%), Query Frame = 1 Query: 40 PAVLHAS-MAPLLFVQRINVGTLVVRATVLGHIPGKQVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 504 PAVL + P F Q + L V +PG +VF+ LD S L + V L VF+ P+A + I SNY ADA+ +S A++GSL+ IGSP IL++ G+ DL L +L + GL SL RH G L+S++G ++++ R + Sbjct: 985 PAVLTENDPTPSTFFQSVTFSPLSVLLDARVFVPGSRVFLGLDGSPLFFEGVRLTDVFSTPQAFLKGILSNYVADAIFRSPALLGSLEIIGSPAILVSRVVSGLKDLVLLSASG-------SLTGAGRGLLSLTRHVVGGTLASLAGFSSSVRRNL 1133
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: A0A6P8J9P6_ACTTE (vacuolar protein sorting-associated protein 13B-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8J9P6_ACTTE) HSP 1 Score: 75.1 bits (183), Expect = 4.040e-11 Identity = 44/120 (36.67%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 145 QVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 504 ++F+ +D + L L + V+A A A+ + +Y + M + VVGSL+ +G+P L+ + +G+ D F LP L +GP A + G+SSLVRH SAGAL+SV+ L + +SR + Sbjct: 2886 KLFIGMDDTSLSLGHFHMSPVYAPTSAFAQKVLFHYMSSVMFKIGWVVGSLELLGNPAGLIRNFSQGLSDFFFLPYDGLTRGPGAFVSGMSQGVSSLVRHVSAGALTSVTNLASGISRNL 3005
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: UPI000719AC75 (vacuolar protein sorting-associated protein 13B-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719AC75) HSP 1 Score: 70.9 bits (172), Expect = 1.010e-9 Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 1 Query: 145 QVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 504 ++F+A D + L R + P +A + +YAA A L++ VVGSL +GSPT +L E G+ DLF +P GP + + G +SL+RH SAGA++SV+ ++SR + Sbjct: 3697 KLFLASDSTPLSFGAFERRDLCTTPWCLANALLRHYAAGAALRAGWVVGSLDLLGSPTSMLREVTSGMADLFRMPYEGATHGPGSFIAGMSRGAASLLRHTSAGAITSVTNFALSVSRNM 3816
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: A7SZF7_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SZF7_NEMVE) HSP 1 Score: 69.3 bits (168), Expect = 2.940e-9 Identity = 41/120 (34.17%), Postives = 69/120 (57.50%), Query Frame = 1 Query: 145 QVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 504 ++F+A+D + L + L V+ + A+A+ IF +Y + A+ + V+GSL+ +GSP L+ + +G+ D F LP L +GP A + RH SAGAL+SV+ L ++SR + Sbjct: 1105 KLFIAMDDTPLYFGELQLSPVYTQSSALAQKIFYHYLSAAVFKVGWVLGSLELLGSPAGLIRNFTQGLSDFFYLPYDGLTRGPGAFVSGMXXXXXXXXRHFSAGALTSVTNLATSISRNL 1224
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: A0A6P4ZTE8_BRABE (vacuolar protein sorting-associated protein 13B-like n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZTE8_BRABE) HSP 1 Score: 69.3 bits (168), Expect = 3.230e-9 Identity = 43/120 (35.83%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 145 QVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 504 +VF++ D +RL + S VF + + + +Y + A+ ++ V+GSL +GSP LL G+ D F LP L +GP A + G SSLVRH SAG L+S+ L ++SR + Sbjct: 3549 KVFISSDHTRLTFKHFSRTPVFTVSRNLVQDLALHYGSGALFRAGWVLGSLDILGSPASLLGSISSGISDFFRLPYEGLTRGPGAFVSGVTKGASSLVRHVSAGTLTSIVNLANSISRNM 3668
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: C3ZQS8_BRAFL (Uncharacterized protein n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZQS8_BRAFL) HSP 1 Score: 69.3 bits (168), Expect = 3.250e-9 Identity = 43/120 (35.83%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 145 QVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 504 +VF++ D +RL + S VF + + + +Y + A+ ++ V+GSL +GSP LL G+ D F LP L +GP A + G SSLVRH SAG L+S+ L ++SR + Sbjct: 3880 KVFISSDHTRLTFKNFSRTPVFTVSRNLVQDLALHYGSGALFRAGWVLGSLDILGSPASLLGSISSGISDFFRLPYEGLTRGPGAFVSGVTKGASSLVRHVSAGTLTSIVNLANSISRNM 3999
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: A0A7M7N2I3_STRPU (Uncharacterized protein n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7N2I3_STRPU) HSP 1 Score: 68.6 bits (166), Expect = 5.790e-9 Identity = 39/120 (32.50%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 145 QVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 504 ++F++LD++RL Q ++A + + + +Y + A+ ++ +GSL IG+P L G+YD LP L +GP A + G+SSLVRH SAG L+S++ +++SR + Sbjct: 3650 KMFLSLDQTRLQFQRYETGPIYATHRQLGQALTLHYTSGALFKAGWAIGSLDLIGNPAGFLRSARTGLYDTMYLPYEGLTRGPSAFVSGVASGMSSLVRHLSAGTLTSITKFASSMSRNL 3769 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig98.10.1 >prot_C-tenellus_contig98.10.1 ID=prot_C-tenellus_contig98.10.1|Name=mRNA_C-tenellus_contig98.10.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=323bp MDLEVIRLAPLQLPAVLHASMAPLLFVQRINVGTLVVRATVLGHIPGKQVback to top mRNA from alignment at C-tenellus_contig98:22330..27100- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig98.10.1 ID=mRNA_C-tenellus_contig98.10.1|Name=mRNA_C-tenellus_contig98.10.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4771bp|location=Sequence derived from alignment at C-tenellus_contig98:22330..27100- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig98:22330..27100- >mRNA_C-tenellus_contig98.10.1 ID=mRNA_C-tenellus_contig98.10.1|Name=mRNA_C-tenellus_contig98.10.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=969bp|location=Sequence derived from alignment at C-tenellus_contig98:22330..27100- (Choristocarpus tenellus KU2346)back to top |