mRNA_C-tenellus_contig9780.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9780.1.1 vs. uniprot
Match: D8LE55_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE55_ECTSI) HSP 1 Score: 279 bits (713), Expect = 3.170e-88 Identity = 152/243 (62.55%), Postives = 185/243 (76.13%), Query Frame = 1 Query: 10 DNRRAGVVCIWLLGLVLGYLMLREFTQLLRQIAESRLGRPSLVRETSRVGSIEAALIKTWRG----VRWIAILTFRRRVWRGEGMG---RQGSREQVAGFFKDVILAPNIQEQVRSLAVATCNARRNRAPYRHLLLYGPPGTGKTMVAKRLAASSGMDCAIMSGGDVGPLGKDAVTELHGIFRWAKRTSRGLLLFIDEAEAFLGRRSNPTMSEDTRNALNALLFHTGTPSHCFMMVLATNRAE 717 D RRA + WLLGL+ GY++L+E T LLRQ+ E+ LG+PSLVRETSRVG++ + + VR+I + + GEG + RE+ F+DV+LAP+++EQV SLAVAT N++RN APYRHLLLYGPPGTGKTMVAKRLAA SGMDCA+MSGGDV PLGK+AVTELH +FRWA ++ RGLLLFIDEAEAFLG+RS P MSE TRNALNALL++TG+ S MMVLATNRAE Sbjct: 133 DPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHAAKCLVRFICEKAGKASL-EGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAE 374
BLAST of mRNA_C-tenellus_contig9780.1.1 vs. uniprot
Match: A0A835Z4U6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U6_9STRA) HSP 1 Score: 244 bits (622), Expect = 4.770e-75 Identity = 139/236 (58.90%), Postives = 155/236 (65.68%), Query Frame = 1 Query: 10 DNRRAGVVCIWLLGLVLGYLMLREFTQLLRQIAESRLGRPSLVRETSRVGSIEAALIKTWRGVRWIAILTFRRRVWRGEGMGRQGSREQVAGFFKDVILAPNIQEQVRSLAVATCNARRNRAPYRHLLLYGPPGTGKTMVAKRLAASSGMDCAIMSGGDVGPLGKDAVTELHGIFRWAKRTSRGLLLFIDEAEAFLGRRSNPTMSEDTRNALNALLFHTGTPSHCFMMVLATNRAE 717 D +A V WLLGL GY +LRE L ++ +RLGRPSLVRETSR G E A +EQV SLA AT NAR+NRAP+RHLLLYGPPGTGKTMVAKRLAA SGMD AIMSGGDVGPLGKDAVTELH +F WA+R+ RG+LLFIDEAEAFLG RS+ T+SEDTRNALNALL+ TGT SH FM+VLATNRAE Sbjct: 147 DPMKAAAVAAWLLGLAAGYFILREAIGLCGRVISARLGRPSLVRETSR---------------------------------GWHRKSEDAA------------KEQVLSLATATRNARKNRAPFRHLLLYGPPGTGKTMVAKRLAACSGMDYAIMSGGDVGPLGKDAVTELHSLFAWARRSKRGVLLFIDEAEAFLGSRSSSTLSEDTRNALNALLYQTGTASHSFMLVLATNRAE 337
BLAST of mRNA_C-tenellus_contig9780.1.1 vs. uniprot
Match: A0A6H5JZK9_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZK9_9PHAE) HSP 1 Score: 221 bits (564), Expect = 7.010e-66 Identity = 135/276 (48.91%), Postives = 162/276 (58.70%), Query Frame = 1 Query: 100 QIAESRLGRPSLVRETSRVGSIEAA---LIKTWRGVRWIAILTFRRRVWRGEGMG---RQGSREQVAGFFKDVILAPNIQEQVRSLAVATCNARRNRAPYRHLLLYGPPGTGKTMVAKRL----------------------------------------------------------------AASSGMDCAIMSGGDVGPLGKDAVTELHGIFRWAKRTSRGLLLFIDEAEAFLGRRSNPTMSEDTRNALNALLFHTGTPSHCFMMVLATNRAE 717 Q+ E+ LG+PSLVRETSRVG++ + L+ + + + GEG + RE+ F+DV+LAP+++EQV SLAVAT NA+RN APYRHLLLYGPPGTGKTMVAKRL AA SGMDCA+MSGGDV PLGK+AVTELHG+FRWA ++ RGLLLFIDEAEAFLG+RS P MSE TRNALNALL++TG+ S MMVLATNRAE Sbjct: 91 QLLETYLGKPSLVRETSRVGTLRSTNHCLLHVAKCLISFKCKKAGKASLEGEGWSPKRTRSGREEAMNAFRDVVLAPDLKEQVLSLAVATRNAKRNGAPYRHLLLYGPPGTGKTMVAKRLVSGLSNLSRSLEDGLDADPCCWNPSKRMLPRLFRHLSEFPRQGCQERLSKHSFTGTMRKTSCFQAAYSGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAE 366
BLAST of mRNA_C-tenellus_contig9780.1.1 vs. uniprot
Match: W4FKJ4_9STRA (AAA domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FKJ4_9STRA) HSP 1 Score: 209 bits (531), Expect = 7.270e-60 Identity = 118/221 (53.39%), Postives = 150/221 (67.87%), Query Frame = 1 Query: 61 GYLMLREFTQLLRQIAESRLGRPSLVRETSRVGSIEAALIKTWRGVRWIAILTFRRRVWRGEGMGRQGSREQVAGFFKDVILAPNIQEQVRSLAVATCNARRNRAPYRHLLLYGPPGTGKTMVAKRLAASSGMDCAIMSGGDVGPLGKDAVTELHGIFRWAKRTSRGLLLFIDEAEAFLGRRSNPT--MSEDTRNALNALLFHTGTPSHCFMMVLATNRAE 717 G + RE +++ ++ E RLG+PSL+RETSR G + + W R W +G + F+DV++ ++ ++ LA AT NA+++ APYRHLLLYGPPGTGKTMVAKRLAA+SGMD AIMSGGDVGPLG DAVTELH +F WA+ + RG+L+FIDEAEAFLG R+ MSE RNALNALLFHTGT + FM+V+ATNR E Sbjct: 355 GIYLTRETIRIVGRLVEQRLGKPSLIRETSRQGGL----------LGWF-------RSWFQAPVGLES--------FQDVVVHAALESRLLGLARATRNAKKHNAPYRHLLLYGPPGTGKTMVAKRLAAASGMDYAIMSGGDVGPLGSDAVTELHALFHWAQSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLFHTGTQTKQFMLVIATNRPE 550
BLAST of mRNA_C-tenellus_contig9780.1.1 vs. uniprot
Match: F0Y2W0_AURAN (AAA domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2W0_AURAN) HSP 1 Score: 206 bits (523), Expect = 1.850e-59 Identity = 115/236 (48.73%), Postives = 152/236 (64.41%), Query Frame = 1 Query: 10 DNRRAGVVCIWLLGLVLGYLMLREFTQLLRQIAESRLGRPSLVRETSRVGSIEAALIKTWRGVRWIAILTFRRRVWRGEGMGRQGSREQVAGFFKDVILAPNIQEQVRSLAVATCNARRNRAPYRHLLLYGPPGTGKTMVAKRLAASSGMDCAIMSGGDVGPLGKDAVTELHGIFRWAKRTSRGLLLFIDEAEAFLGRRSNPTMSEDTRNALNALLFHTGTPSHCFMMVLATNRAE 717 D R + + ++ L+ G RE L R +AE+ LGRP LVRETSR R+ + RV R +R G+ V+L +++ +V LAVAT NA+RNRAP+RH+LL+GPPGTGKT+VAKRLA +SG++ A+MSGGDVGPLG D VT LH +FRWA+ + G+L+FIDEAEAFL RS ++E RNALNA L+ TG+P+ F++VLATNRAE Sbjct: 188 DPRMLATLVLAIVALIGGGFFAREAAILARSLAEAYLGRPRLVRETSR---------------RYFSRTAAALRVAGRAAAARARARAAEDGWLDGVVLPGDLRTRVLQLAVATRNAKRNRAPFRHMLLHGPPGTGKTLVAKRLAKASGLEYALMSGGDVGPLGADGVTALHTLFRWARTSDTGVLIFIDEAEAFLASRSRSKLTEHMRNALNAFLYQTGSPTKSFILVLATNRAE 408
BLAST of mRNA_C-tenellus_contig9780.1.1 vs. uniprot
Match: A0A6G0Q5C4_9STRA (AAA domain-containing protein (Fragment) n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0Q5C4_9STRA) HSP 1 Score: 199 bits (506), Expect = 2.990e-59 Identity = 119/225 (52.89%), Postives = 151/225 (67.11%), Query Frame = 1 Query: 49 GLVLGYLMLREFTQLLRQIAESRLGRPSLVRETSRVGSIEAALIKTWRGVRWIAILTFRRRVWRGEGMGRQGSREQVAGFFKDVILAPNIQEQVRSLAVATCNARRNRAPYRHLLLYGPPGTGKTMVAKRLAASSGMDCAIMSGGDVGPLGKDAVTELHGIFRWAKRTSRGLLLFIDEAEAFLGRRSNPT--MSEDTRNALNALLFHTGTPSHCFMMVLATNRAE 717 L G + RE +++ ++ E RLG+PSLVRETSR A +R + FRR +G+ +++A DV+L ++ +V +A +T NA + APYRHLLLYGPPGTGKTMVAKRLA +SGMD AI+SGGDVGPLG DAVTELH +F+WA + RG+L+FIDEAEAFLG R+ MSE RNALNALL+HTGT S FM+V+ATNR E Sbjct: 5 ALAAGIYLSREVIRIVGKLIEQRLGKPSLVRETSR----SAGAFGFFRSL-------FRRNAAKGQ--------DELA----DVVLRNALETRVFEIARSTRNAMLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWANSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLYHTGTQSKKFMLVVATNRPE 206
BLAST of mRNA_C-tenellus_contig9780.1.1 vs. uniprot
Match: A0A024UDM1_9STRA (AAA domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UDM1_9STRA) HSP 1 Score: 206 bits (523), Expect = 1.100e-58 Identity = 119/221 (53.85%), Postives = 148/221 (66.97%), Query Frame = 1 Query: 61 GYLMLREFTQLLRQIAESRLGRPSLVRETSRVGSIEAALIKTWRGVRWIAILTFRRRVWRGEGMGRQGSREQVAGFFKDVILAPNIQEQVRSLAVATCNARRNRAPYRHLLLYGPPGTGKTMVAKRLAASSGMDCAIMSGGDVGPLGKDAVTELHGIFRWAKRTSRGLLLFIDEAEAFLGRRSNPT--MSEDTRNALNALLFHTGTPSHCFMMVLATNRAE 717 G + RE ++ ++ E RLG+PSLVRETSR G L R V + + G + F+DV++ ++ ++ LA AT NA+++ PYRHLLLYGPPGTGKTMVAKRLAA+SGMD AIMSGGDVGPLG DAVTELH +FRWA+ + RG+L+FIDEAEAFLG R+ MSE RNALNALLFHTGT + FM+V+ATNR E Sbjct: 356 GIYLTREIMRIAGRLVEQRLGKPSLVRETSRKGGFFGWL----RSVFQVPV-------------GLES--------FQDVVVHAALETRLLGLARATRNAKKHNVPYRHLLLYGPPGTGKTMVAKRLAAASGMDYAIMSGGDVGPLGSDAVTELHALFRWAQSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLFHTGTQTKQFMLVIATNRPE 551
BLAST of mRNA_C-tenellus_contig9780.1.1 vs. uniprot
Match: A0A812Z0Q8_9DINO (ATAD3A protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812Z0Q8_9DINO) HSP 1 Score: 195 bits (495), Expect = 6.680e-58 Identity = 111/217 (51.15%), Postives = 137/217 (63.13%), Query Frame = 1 Query: 61 GYLMLREFTQLLRQIAESRLGRPSLVRETSRVGSIEAALIKTWRGVRWIAILTFRRRVWRGEGMGRQGSREQVAGFFKDVILAPNIQEQVRSLAVATCNARRNRAPYRHLLLYGPPGTGKTMVAKRLAASSGMDCAIMSGGDVGPLGKDAVTELHGIFRWAKRTSRGLLLFIDEAEAFLGRRSNPTMSEDTRNALNALLFHTGTPSHCFMMVLATNR 711 G ++RE LLR+ RLGRPSLVR T+R G ++ IAIL R R F DV+L P +++QV LA AT +A+R R P +H + YGPPGTGKTMVA+R A SG++ AIMSGGDV PL + AVTELH +FRW R+ RG+LLFIDEA+AFL R N MSE RNAL +L+HTGTPS FM+V+ATNR Sbjct: 6 GIYLVREMAILLREQLNKRLGRPSLVRMTNRRGGMQEF---------GIAILRLLR------------LRPPRGAEFNDVVLHPKLKQQVMRLADATSSAKRRRMPLQHAMFYGPPGTGKTMVAQRFAEYSGLEYAIMSGGDVAPLEEQAVTELHKLFRWVHRSKRGVLLFIDEADAFLASRKNSGMSESLRNALTTMLYHTGTPSSQFMLVIATNR 201
BLAST of mRNA_C-tenellus_contig9780.1.1 vs. uniprot
Match: A0A812LTK1_9DINO (Atad3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812LTK1_9DINO) HSP 1 Score: 199 bits (505), Expect = 2.230e-57 Identity = 121/236 (51.27%), Postives = 148/236 (62.71%), Query Frame = 1 Query: 4 ILDNRRAGVVCIWLLGLVLGYLMLREFTQLLRQIAESRLGRPSLVRETSRVGSIEAALIKTWRGVRWIAILTFRRRVWRGEGMGRQGSREQVAGFFKDVILAPNIQEQVRSLAVATCNARRNRAPYRHLLLYGPPGTGKTMVAKRLAASSGMDCAIMSGGDVGPLGKDAVTELHGIFRWAKRTSRGLLLFIDEAEAFLGRRSNPTMSEDTRNALNALLFHTGTPSHCFMMVLATNR 711 I D R G + + G +RE ++ +I E RL PSLVRE+S + + W + G+ R+G DVIL +I ++V+ LAVAT N R N APYRH++ YGPPGTGKTM+AKRLA SSGMD AIMSGGDVGPLGK+AVTELH +F +A+R+ RG+LLFIDEA+AFL RS MSE+ RNALNALLF TG S FMMVLATNR Sbjct: 134 ITDGDRVGRTVLAVSLAAAGIYSMREGARVGGRILEKRLLTPSLVRESS---ASTGRFSLRGQAKHWFDSM---------RGVQREGES------LTDVILRKDIADRVQRLAVATRNTRANGAPYRHMMFYGPPGTGKTMLAKRLARSSGMDYAIMSGGDVGPLGKEAVTELHRLFDYAERSQRGMLLFIDEADAFLASRSKAAMSEEQRNALNALLFRTGEASDRFMMVLATNR 351
BLAST of mRNA_C-tenellus_contig9780.1.1 vs. uniprot
Match: A0A7S3LY20_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LY20_9STRA) HSP 1 Score: 202 bits (515), Expect = 3.050e-57 Identity = 115/243 (47.33%), Postives = 162/243 (66.67%), Query Frame = 1 Query: 16 RRAGVVCIWLLGLVLGYLMLREFTQLLRQIAESRLGRPSLVRETSRVGSIEAALIKTWRGVRWIAILTFRRRVWRGEGMGRQGSREQVAGFFKDVILAPNIQEQVRSLAVATCNARRNRAPYRHLLLYGPPGTGKTMVAKRLAASSGMDCAIMSGGDVGPLGKDAVTELHGIFRWAKRTSRGLLLFIDEAEAFLGRRSN---------PTMSEDTRNALNALLFHTGTPSHCFMMVLATNRAE 717 ++ +V +LGL+ Y + +E +LLRQ +SR+G+PSLVRETS SI I + R E + SR+++ F ++IL+ +++V LA+AT N +++ AP+RH+LL+G PGTGKT++A+RLAASSGMD AIMSGGDV PLG+DAV++LHG+F+WA R+ +GLL+FIDEAEAFL R++ + RNALNALL+ TGTPSH FM++LATNR + Sbjct: 331 KQVAIVTGIILGLIALYYVFKELFKLLRQYVQSRIGKPSLVRETSFTYSIVPHFIANYFS--------------RPEELS--SSRKKLEEAFSNIILSSEDKQRVVHLALATRNTKQSDAPFRHVLLHGSPGTGKTLIARRLAASSGMDYAIMSGGDVAPLGEDAVSQLHGLFQWAARSRKGLLVFIDEAEAFLAARTSVAGAGSGDGASSEVHIRNALNALLYQTGTPSHNFMLILATNRPQ 557 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9780.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9780.1.1 >prot_C-tenellus_contig9780.1.1 ID=prot_C-tenellus_contig9780.1.1|Name=mRNA_C-tenellus_contig9780.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=239bp VILDNRRAGVVCIWLLGLVLGYLMLREFTQLLRQIAESRLGRPSLVRETSback to top mRNA from alignment at C-tenellus_contig9780:560..3976- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9780.1.1 ID=mRNA_C-tenellus_contig9780.1.1|Name=mRNA_C-tenellus_contig9780.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3417bp|location=Sequence derived from alignment at C-tenellus_contig9780:560..3976- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9780:560..3976- >mRNA_C-tenellus_contig9780.1.1 ID=mRNA_C-tenellus_contig9780.1.1|Name=mRNA_C-tenellus_contig9780.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=717bp|location=Sequence derived from alignment at C-tenellus_contig9780:560..3976- (Choristocarpus tenellus KU2346)back to top |