mRNA_C-tenellus_contig9767.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: A0A835Z819_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z819_9STRA) HSP 1 Score: 235 bits (600), Expect = 4.510e-69 Identity = 123/156 (78.85%), Postives = 135/156 (86.54%), Query Frame = 1 Query: 1 VRPELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNV-----GDGVKSE---EELQEVFAVVFDEFHYMNDRDRGTV 444 VR ELF ALFPFDLDGFQ EAL AL RKNVIVSAPTGSGKTVAGELAIYYALAL LRVFYTTPLKALSNQK++DF+++FG ERVGLLTGDSS+NREAQV VMTTEVFRNMLYD+ G+G + +EL++VFAVVFDEFHYMNDRDRGTV Sbjct: 110 VRSELFHALFPFDLDGFQLEALDALGARKNVIVSAPTGSGKTVAGELAIYYALALGLRVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGDSSYNREAQVCVMTTEVFRNMLYDSAAGIVGGEGAAATLGPDELKDVFAVVFDEFHYMNDRDRGTV 265
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: A0A6H5L357_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L357_9PHAE) HSP 1 Score: 209 bits (531), Expect = 1.050e-63 Identity = 109/148 (73.65%), Postives = 122/148 (82.43%), Query Frame = 1 Query: 1 VRPELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 444 V+PELFQALFPF+LD FQTEAL LA R NVIVSAPTGSGKTV GELA+ VFYTTPLKALSNQK+ DF++QFG ++VGLLTGDSSFNR+AQV+VMTTEVFRNMLYD+ G +L +VFAVVFDEFHYMNDRDRGTV Sbjct: 35 VQPELFQALFPFELDPFQTEALRGLAGRNNVIVSAPTGSGKTVVGELAV---------VFYTTPLKALSNQKFQDFRRQFGEDKVGLLTGDSSFNRDAQVAVMTTEVFRNMLYDSEETG-----DLDDVFAVVFDEFHYMNDRDRGTV 168
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: A0A7S4DB23_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB23_HETAK) HSP 1 Score: 198 bits (503), Expect = 1.050e-62 Identity = 104/134 (77.61%), Postives = 111/134 (82.84%), Query Frame = 1 Query: 43 DGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 444 DGFQ EAL AL RKN IVSAPTGSGKTVAGELAIYYALAL LRVFYT+PLKALSNQKY DF++QFG ER GLLTGD+S NR AQV VMTTEVFRNMLY+ EE+L +VFAVVFDEFHYMND RGTV Sbjct: 1 DGFQLEALTALGQRKNAIVSAPTGSGKTVAGELAIYYALALGLRVFYTSPLKALSNQKYQDFRRQFGAERAGLLTGDTSINRGAQVCVMTTEVFRNMLYE--------EEDLLDVFAVVFDEFHYMNDPSRGTV 126
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: A0A4D9D0G8_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0G8_9STRA) HSP 1 Score: 211 bits (537), Expect = 1.810e-60 Identity = 109/148 (73.65%), Postives = 125/148 (84.46%), Query Frame = 1 Query: 1 VRPELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 444 V+ E F+A+FPF LD FQ AL AL R+NV+VSAPTGSGKTVAGELAIYYALAL+LRV+YTTPLKALSNQK+ADF +QFGPERVGLLTGD++ NR AQV++MTTEV+RNMLY GD EL +VFAVVFDEFHYMND +RGTV Sbjct: 157 VKREFFKAIFPFPLDDFQLAALDALGGRENVVVSAPTGSGKTVAGELAIYYALALDLRVYYTTPLKALSNQKFADFCRQFGPERVGLLTGDTNINRGAQVTIMTTEVYRNMLY--TGDAG----ELDQVFAVVFDEFHYMNDPERGTV 298
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: D7G373_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G373_ECTSI) HSP 1 Score: 210 bits (534), Expect = 4.540e-60 Identity = 110/148 (74.32%), Postives = 122/148 (82.43%), Query Frame = 1 Query: 1 VRPELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 444 V+PELFQALFPF+LD FQTEAL LA R NVIVSAPTGSGKTV GELA+ VFYTTPLKALSNQK+ DF++QFG ++VGLLTGDSSFNR+AQV+VMTTEVFRNMLYD+ G EL +VFAVVFDEFHYMNDRDRGTV Sbjct: 377 VQPELFQALFPFELDPFQTEALRGLAGRNNVIVSAPTGSGKTVVGELAV---------VFYTTPLKALSNQKFQDFRRQFGEDKVGLLTGDSSFNRDAQVAVMTTEVFRNMLYDSEETG-----ELDDVFAVVFDEFHYMNDRDRGTV 510
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: A0A7S2DG78_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DG78_9STRA) HSP 1 Score: 198 bits (504), Expect = 4.590e-56 Identity = 103/145 (71.03%), Postives = 117/145 (80.69%), Query Frame = 1 Query: 10 ELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 444 ELF+ALF FDLD FQ EAL AL R++V+VSAPTGSGKTVAGELAI+YALAL L+V YTTPLKALSNQK+ DF++Q+G RVGLLTGDS NREA V VMTTEVFRNMLYD++ +Q+VFAVV DE HYMND RGTV Sbjct: 134 ELFRALFSFDLDSFQLEALQALGTRRSVVVSAPTGSGKTVAGELAIWYALALGLKVMYTTPLKALSNQKFRDFRRQYGAHRVGLLTGDSGVNREAPVLVMTTEVFRNMLYDDLNM-------VQDVFAVVLDELHYMNDPSRGTV 271
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: A0A7S0QGM8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QGM8_9CRYP) HSP 1 Score: 178 bits (452), Expect = 2.000e-53 Identity = 94/149 (63.09%), Postives = 111/149 (74.50%), Query Frame = 1 Query: 1 VRPELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNRE-AQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 444 ++ E Q FP+ LD FQ +A+ +L +K+VIVSAPTGSGKTV GE A+Y LAL +V YTTPLKALSNQKY+DF KQFG ERVGLLTGD S NRE A V V+TTEV+RNMLYD K + +V +V+ DEFHYMNDRDRGTV Sbjct: 22 IQVETIQRCFPYPLDTFQIDAVRSLVEKKSVIVSAPTGSGKTVCGEAAVYLGLALGKKVLYTTPLKALSNQKYSDFCKQFGEERVGLLTGDVSLNRENATVIVLTTEVYRNMLYD------KESGTVSDVHSVILDEFHYMNDRDRGTV 164
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: F0YPB7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPB7_AURAN) HSP 1 Score: 179 bits (455), Expect = 1.930e-52 Identity = 96/139 (69.06%), Postives = 107/139 (76.98%), Query Frame = 1 Query: 28 FPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 444 FPF LD FQ +AL +L +NVIVSAPTGSGKTVAGELAI YAL++ RVFYTTPLKALSNQK+ DF QFG RVGL TGDS R+A V VMTTEVFRNM+YD+ G E ++VFAVVFDEFHYMND RGTV Sbjct: 1 FPFPLDAFQRDALRSLRADRNVIVSAPTGSGKTVAGELAIAYALSVGKRVFYTTPLKALSNQKFGDFCAQFGAGRVGLSTGDSGVRRDAAVVVMTTEVFRNMIYDDEGRA----EIAKDVFAVVFDEFHYMNDAQRGTV 135
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: A0A3D0P8F4_9CYAN (DEAD/DEAH box helicase (Fragment) n=1 Tax=Synechococcales bacterium UBA8647 TaxID=2055797 RepID=A0A3D0P8F4_9CYAN) HSP 1 Score: 173 bits (438), Expect = 5.140e-52 Identity = 92/141 (65.25%), Postives = 107/141 (75.89%), Query Frame = 1 Query: 22 ALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 444 ALFPF LD FQ EA+ AL +V+VSAPTGSGKT+ GE AI+ ALA RVFYTTPLKALSNQK DF++QFG +RVGL+TGD + NREA + VMTTE+FRNMLY + DG E+ L+ V AVV DE HYMND RGTV Sbjct: 11 ALFPFPLDDFQLEAVAALNQGHSVVVSAPTGSGKTLIGEYAIHRALAHGQRVFYTTPLKALSNQKLRDFREQFGADRVGLMTGDLTANREAPIVVMTTEIFRNMLYAEIEDG---EDPLEGVEAVVLDECHYMNDSQRGTV 148
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: S0F3W1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3W1_CHOCR) HSP 1 Score: 187 bits (474), Expect = 5.320e-52 Identity = 93/147 (63.27%), Postives = 114/147 (77.55%), Query Frame = 1 Query: 4 RPELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 444 + +L + FPF LD FQT AL +LAN ++V++SAPTG+GKT+ GE+A+Y AL LRVFYTTPLKALSNQK+ DFKK FG RVGLLTGD + NR+A V VMTTEV+RNMLY + + V ++FAVVFDEFHY+NDRDRGTV Sbjct: 113 QEKLILSTFPFKLDNFQTSALHSLANGESVVLSAPTGAGKTIVGEMAVYLALCRRLRVFYTTPLKALSNQKFYDFKKLFGERRVGLLTGDVTVNRDADVVVMTTEVYRNMLYADSTEVVSYRSVTDDLFAVVFDEFHYLNDRDRGTV 259 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9767.1.1 >prot_C-tenellus_contig9767.1.1 ID=prot_C-tenellus_contig9767.1.1|Name=mRNA_C-tenellus_contig9767.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=152bp VRPELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYback to top mRNA from alignment at C-tenellus_contig9767:288..2345- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9767.1.1 ID=mRNA_C-tenellus_contig9767.1.1|Name=mRNA_C-tenellus_contig9767.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2058bp|location=Sequence derived from alignment at C-tenellus_contig9767:288..2345- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9767:288..2345- >mRNA_C-tenellus_contig9767.1.1 ID=mRNA_C-tenellus_contig9767.1.1|Name=mRNA_C-tenellus_contig9767.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=456bp|location=Sequence derived from alignment at C-tenellus_contig9767:288..2345- (Choristocarpus tenellus KU2346)back to top |