mRNA_C-tenellus_contig9766.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9766.2.1 vs. uniprot
Match: A0A024FXH0_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FXH0_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 2.380e-17 Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 1 Query: 226 MLGSFVSGNWNENHINPLLRINWRVCLMPAASGIPAPIAYT*VAGVKKHIVGFVSRS-----LGTIGGI 417 ML F SGNWNEN++NPL RINWR L+PAA+ IPAPIAY V VKK +VGF+ R+ LG GG+ Sbjct: 1 MLWLFESGNWNENNLNPLTRINWRASLVPAAAVIPAPIAYIKVVAVKKLVVGFLIRTSGPLPLGVFGGL 69
BLAST of mRNA_C-tenellus_contig9766.2.1 vs. uniprot
Match: F4S2J7_MELLP (Uncharacterized protein n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4S2J7_MELLP) HSP 1 Score: 83.2 bits (204), Expect = 1.010e-16 Identity = 59/172 (34.30%), Postives = 73/172 (42.44%), Query Frame = -2 Query: 58 MKTSLANAFAMVHLP*IQEFQL*KL-------------------NANTPNRS*RPT------HKSNYMLFYSSNLCIRYWSWNPRGCWH*TYPPIDPQ*GIYMVLIPIAGHKRAQHCSLCQDWVIYPPVAFLGCCSRLSGSLSEIEPQFPVTR*GHSKPIPYHPQLIGQKLE 498 MK+SLA+AFA+V L IQEF + N+N P P + +Y LF +N IRYWSWN RGCWH T PPIDP+ P++G IEP FPVTR H +P+ YH +LIGQ E Sbjct: 1 MKSSLADAFAVVCLTSIQEFTSDDVIQMPPTDPINHYGDPRNQQNSNIPGSLQHPVKCIKVHQEFDYELFNVNNFNIRYWSWNYRGCWHQTCPPIDPR--------PLSG----------------------------------IEPLFPVTRHHHGRPLSYHRKLIGQIFE 130
BLAST of mRNA_C-tenellus_contig9766.2.1 vs. uniprot
Match: B8CEF3_THAPS (rRNA intron-encoded homing endonuclease (Fragment) n=2 Tax=Eukaryota TaxID=2759 RepID=B8CEF3_THAPS) HSP 1 Score: 76.3 bits (186), Expect = 8.900e-15 Identity = 43/63 (68.25%), Postives = 46/63 (73.02%), Query Frame = 1 Query: 508 TKMTRYHRSLNHKLCRLGI--------VRVKKSKSLGARESMVARLKRKEIDGRVSPGVEPAA 672 +KM RYHRSLNHKLCRLGI +KSKSLG+ SMVARLK KEIDGR PGVEPAA Sbjct: 7 SKMIRYHRSLNHKLCRLGIGGCFLTPPAPYEKSKSLGSGGSMVARLKLKEIDGRAPPGVEPAA 69
BLAST of mRNA_C-tenellus_contig9766.2.1 vs. uniprot
Match: J9HR62_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HR62_9SPIT) HSP 1 Score: 77.0 bits (188), Expect = 1.370e-14 Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = -2 Query: 238 PTHKSNYMLFYSSNLCIRYWSWNPRGCWH*TYPPIDPQ*GIYMVLIPIAGHK 393 P+ KSNY LF +N IRYWSWN RGCWH T PPIDP+ G+ ++LI I H+ Sbjct: 15 PSQKSNYELFNCNNFNIRYWSWNYRGCWHQTCPPIDPRKGVQILLIAIPKHR 66
BLAST of mRNA_C-tenellus_contig9766.2.1 vs. uniprot
Match: A0A6A5LB40_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5LB40_LUPAL) HSP 1 Score: 77.8 bits (190), Expect = 2.240e-14 Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 3 Query: 45 QQRFIQVSVLSAVDGRVLAYCGLNG*RGIGVRFRRGSLRDGYNIQGMQQAGKLPNPDTG 221 ++R IQ+S LS DGR++AY G G GVRFRRGSLR+GY+IQG QQA KLPNPDTG Sbjct: 30 RRRIIQISALSTFDGRIVAYHG-----GDGVRFRRGSLRNGYHIQGRQQARKLPNPDTG 83
BLAST of mRNA_C-tenellus_contig9766.2.1 vs. uniprot
Match: A0A397IPV8_9GLOM (Uncharacterized protein n=2 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397IPV8_9GLOM) HSP 1 Score: 75.1 bits (183), Expect = 7.240e-14 Identity = 53/119 (44.54%), Postives = 59/119 (49.58%), Query Frame = -3 Query: 24 TICFFTPATYVYAIGAGIPEAAGIRHTLQLILNKGFIWFSFQLPDTKEPSIAPCVRIG*FTRLLHSLDVVAVSQAPSPKSNPNSPLPVKATVSQYPTIHS**DRNLNETL-LWRPAIRK 377 T F T T +YAIGAGI AAG R LQL L K F +SFQL D EP VSQAPSP+SNPNSPLPVK RNLN++ + AIRK Sbjct: 8 TTSFLTATTLIYAIGAGITAAAGTRLALQLFLVKRFKLYSFQLRDPNEPP---------------------VSQAPSPESNPNSPLPVKTM-----------GRNLNDSSPVQDHAIRK 94
BLAST of mRNA_C-tenellus_contig9766.2.1 vs. uniprot
Match: Q7RN92_PLAYO (Uncharacterized protein n=1 Tax=Plasmodium yoelii yoelii TaxID=73239 RepID=Q7RN92_PLAYO) HSP 1 Score: 74.3 bits (181), Expect = 1.220e-13 Identity = 47/95 (49.47%), Postives = 54/95 (56.84%), Query Frame = -3 Query: 78 TPATYVYAIGAGIPEAAGIRHTLQLILNKGFIWFSFQLPDTKEPSIAPCVRIG*FTRLLHSLDVVAVSQAPSPKSNPNSPLPVKATVSQYPTIHS 362 T +YAIGAGI AAG R LQLI K + S + I P + I LDVVA+SQAPSP+SN NSPLPVKA + QYP I S Sbjct: 15 TATILIYAIGAGITAAAGTRLALQLIFGK--VLNSHH--SNYKTKIWPYIVISCHYLSYLELDVVAISQAPSPESNSNSPLPVKAMLGQYPNIKS 105
BLAST of mRNA_C-tenellus_contig9766.2.1 vs. uniprot
Match: A0A098VSY4_9MICR (Uncharacterized protein n=1 Tax=Mitosporidium daphniae TaxID=1485682 RepID=A0A098VSY4_9MICR) HSP 1 Score: 77.4 bits (189), Expect = 2.090e-13 Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 3 Query: 24 LADCRPPQQRFIQVSVLSAVDGRVLAYCGLNG*RGIGVRFRRGSLRDGYNIQGMQQAGKLPNPDTGSNAG 233 + CR +R IQ+S LS DGR+ AY G NG VRFRRGSLR+GY+IQG QQA KLPNPDTG G Sbjct: 32 MTTCR---RRTIQISALSTFDGRIEAYHGSNG-----VRFRRGSLRNGYHIQGRQQARKLPNPDTGRPLG 93
BLAST of mRNA_C-tenellus_contig9766.2.1 vs. uniprot
Match: A0A5J4NN02_9TREM (Uncharacterized protein n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NN02_9TREM) HSP 1 Score: 76.6 bits (187), Expect = 2.970e-13 Identity = 52/101 (51.49%), Postives = 58/101 (57.43%), Query Frame = -2 Query: 433 PT*VKLSCRLHSW*YPSVNFFTFQPCDHTLPRTQRL*FF----HSDNP*S------A*FMVKATMVS-----SHFRS*LMKTSLANAFAMVHLP*IQEFQL 690 P ++LS RLHSW PSVN F FQ C+HT P QRL F DN + A FMV+ VS S FRS MKTSLANAFA+V L IQEF L Sbjct: 141 PKHIELSRRLHSWWCPSVNSFKFQLCNHTSPGAQRLKGFPGTARGDNKRTTADRQLASFMVRTRTVSDRLRTSDFRSRSMKTSLANAFAVVCLAAIQEFHL 241
BLAST of mRNA_C-tenellus_contig9766.2.1 vs. uniprot
Match: A0A1E7F0L2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F0L2_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 4.730e-13 Identity = 45/74 (60.81%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 493 FHQSRTK-----MTRYHRSLNHKLCRLGIVRV---------KKSKSLGARESMVARLKRKEIDGRVSPGVEPAA 672 FH RTK M RYHRSLNHKLCR GI V + KSLG+ SMVARLK KEIDGR PGVEPAA Sbjct: 6 FHCQRTKVRGSKMIRYHRSLNHKLCRQGIGGVSFRLHQHLVRNHKSLGSGGSMVARLKLKEIDGRAPPGVEPAA 79 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9766.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9766.2.1 >prot_C-tenellus_contig9766.2.1 ID=prot_C-tenellus_contig9766.2.1|Name=mRNA_C-tenellus_contig9766.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=53bp QLVVNHDHLRIAGLHSNVSFKFLSYQLWMVGYWLTVALTGNGELGFDFGEback to top mRNA from alignment at C-tenellus_contig9766:385..1636- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9766.2.1 ID=mRNA_C-tenellus_contig9766.2.1|Name=mRNA_C-tenellus_contig9766.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1252bp|location=Sequence derived from alignment at C-tenellus_contig9766:385..1636- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9766:385..1636- >mRNA_C-tenellus_contig9766.2.1 ID=mRNA_C-tenellus_contig9766.2.1|Name=mRNA_C-tenellus_contig9766.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=159bp|location=Sequence derived from alignment at C-tenellus_contig9766:385..1636- (Choristocarpus tenellus KU2346)back to top |