mRNA_C-tenellus_contig976.2.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig976.2.2 vs. uniprot
Match: D8LGM4_ECTSI (Putative carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGM4_ECTSI) HSP 1 Score: 134 bits (336), Expect = 1.210e-34 Identity = 100/166 (60.24%), Postives = 120/166 (72.29%), Query Frame = 3 Query: 375 SRHRQVMPLEDSKPSVAVDAWLAPSAALIGKVEVGSKASIWYGAVIRGDSGGVTIGEETNVQDDVVLSSGDVDIGKGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGNPAKFLREVSPAEKSQLLKSAVEYVTLSQEHA 872 SRHRQ+MPL S P+VA DAW+APSA L+G+V+V +AS+WYGAV+RGD+G V IG+ +NVQDD +L SGDV +G GVT XXXXXXXXXXXXXXXXXXXXXXXXXXX WGGNPA ++R+V+PAEK+QL KSA YV L+ HA Sbjct: 37 SRHRQLMPLAASAPAVAKDAWVAPSATLVGEVDVSGEASVWYGAVVRGDTGAVAIGKGSNVQDDAILGSGDVSVGAGVTIGHGAIIKSSTVADGSMVXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGAGQVWGGNPAVYMRDVTPAEKAQLTKSAEGYVALAGSHA 202
BLAST of mRNA_C-tenellus_contig976.2.2 vs. uniprot
Match: A0A835Z4X6_9STRA (Putative carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X6_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 8.690e-21 Identity = 58/165 (35.15%), Postives = 80/165 (48.48%), Query Frame = 3 Query: 375 SRHRQVMPLEDSKPSVAVDAWLAPSAALIGKVEVGSKASIWYGAVIRGDSGGVTIGEETNVQDDVVLSSGDVDIGKGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGNPAKFLREVSPAEKSQLLKSAVEYVTLSQEH 869 +RHR MPL +KP++A AW+AP+A+++G V + + AS+WYGAV+RGD+ VT+G +NVQDD VLS G +G+ VT W GNPA F R ++P EK+ L KSA Y L+ H Sbjct: 37 TRHRHTMPLGANKPALAPGAWVAPTASVVGDVALATDASVWYGAVVRGDAQRVTVGARSNVQDDAVLSGGAA-LGEDVTVGHGAIIAGSTVGDRCLIGMKAVLDGADVASDAIIAANAVVRPGSKVLSGQMWAGNPAVFRRALTPDEKAYLAKSAASYAALAAAH 200
BLAST of mRNA_C-tenellus_contig976.2.2 vs. uniprot
Match: A0A7S1X1M9_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X1M9_9CHLO) HSP 1 Score: 96.7 bits (239), Expect = 1.870e-20 Identity = 80/166 (48.19%), Postives = 97/166 (58.43%), Query Frame = 3 Query: 378 RHRQVMPLEDSKPSVAVDAWLAPSAALIGKVEVGSKASIWYGAVIRGDSGGVTIGEETNVQDDVVLSSGDVDIGKGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-WGGNPAKFLREVSPAEKSQLLKSAVEYVTLSQEHA 872 RHR VM + D KP++A AW+APSAA+IG V +G AS+WY +V++GDS V+IGE++NVQD V+ G IGK VT XXXXXXXXXXXXXXXXXX WGGNPA+FLR V P E + A EY L+ EHA Sbjct: 38 RHRPVMNIVDKKPALATGAWVAPSAAVIGSVNLGPSASVWYNSVVKGDSDTVSIGEKSNVQDSAVIV-GPTTIGKAVTIGHGASLYGCTIGDASLVGINATVQAGXXXXXXXXXXXXXXXXXXITIPAGQVWGGNPARFLRAVKPEEANFFQAGADEYAKLATEHA 202
BLAST of mRNA_C-tenellus_contig976.2.2 vs. uniprot
Match: A0A811P0H4_9POAL (Hypothetical protein n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811P0H4_9POAL) HSP 1 Score: 88.6 bits (218), Expect = 1.140e-16 Identity = 63/182 (34.62%), Postives = 86/182 (47.25%), Query Frame = 3 Query: 357 LIPFIVSRHRQVMPLEDSKPSVAVDAWLAPSAALIGKVEVGSKASIWYGAVIRGDSGGVTIGEETNVQDDVVLS------SGDVD---IGKGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-WGGNPAKFLREVSPAEKSQLLKSAVEYVTLSQEHA 872 L+P+ SRHR +M + D P V DA++APSA+LIG V+VG ASIWYG V+RGD+ + IG TN+QD+ ++ SG V IG VT WGGNPAKFLR+++ E + + +SA Y +LS+ HA Sbjct: 77 LVPYFFSRHRTIMNIFDKTPHVHKDAFVAPSASLIGDVQVGPGASIWYGCVLRGDANNIQIGSGTNIQDNSLVHVAKSNLSGKVFPTIIGNNVTVGHSAVLQGCTVEDEAFVGMGATLLDGVVVEKHGMVAAGALVRQNTRIPCGEVWGGNPAKFLRKLTDDEIAFIAESAANYSSLSKAHA 258
BLAST of mRNA_C-tenellus_contig976.2.2 vs. uniprot
Match: A9RJU8_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RJU8_PHYPA) HSP 1 Score: 87.4 bits (215), Expect = 1.230e-16 Identity = 59/177 (33.33%), Postives = 78/177 (44.07%), Query Frame = 3 Query: 372 VSRHRQVMPLEDSKPSVAVDAWLAPSAALIGKVEVGSKASIWYGAVIRGDSGGVTIGEETNVQDDVVLSSGDVDIGKG----------VTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGNPAKFLREVSPAEKSQLLKSAVEYVTLSQEHA 872 +SRH+ + L D KP VA DA++APSA+L+G V+VG K+SIWYG V+RGD+ G+ +G ETN+QD ++S G G G W GNPAKFLRE+ E S + KS Y L+ HA Sbjct: 37 LSRHKTLFNLFDKKPVVAEDAFVAPSASLVGDVQVGPKSSIWYGCVLRGDASGIRVGSETNIQDHSLVSVGGSRFGGGHAPAVIGNRVTIGHSAVIHACTVEDEAFVGMGATLMDGVVVEKGAFVAAGSLVTENTRIPAGQIWAGNPAKFLRELKGDETSFIPKSTDNYSELAAAHA 213
BLAST of mRNA_C-tenellus_contig976.2.2 vs. uniprot
Match: A0A7S2S8M3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8M3_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.900e-16 Identity = 77/171 (45.03%), Postives = 97/171 (56.73%), Query Frame = 3 Query: 375 SRHRQVMPLEDSKPSVAVDAWLAPSAALIGKVEVGSKASIWYGAVIRGDSGGVTIGEETNVQDDVVLS---SGDVDIGKGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-WGGNPAKFLREVSPAEKSQLLKSAVEYVTLSQEHAK 875 +RHR +M L D P+VA ++AP A+++G V + +K+SIWY AV+RGDS VTIGE +NVQD+VV+ S IG VT XXXXXXXXXXXXXXXXXX WGG PA ++R++ AE SQL K A EY L+ H K Sbjct: 46 TRHRTLMSLFDKAPAVASQVFVAPCASVVGDVALATKSSIWYSAVLRGDSSAVTIGEGSNVQDNVVIKTTKSSPAHIGSDVTIGHNAVLTGCTVGNRVLVGMGAVVSEGVEXXXXXXXXXXXXXXXXXXVPSKQLWGGAPAVYMRDLKDAELSQLTKQATEYSALADVHVK 216
BLAST of mRNA_C-tenellus_contig976.2.2 vs. uniprot
Match: A0A0D5CNI8_9CHLO (Gamma type carbonic anhydrase n=1 Tax=Lobosphaera incisa TaxID=312850 RepID=A0A0D5CNI8_9CHLO) HSP 1 Score: 86.3 bits (212), Expect = 2.260e-16 Identity = 57/174 (32.76%), Postives = 79/174 (45.40%), Query Frame = 3 Query: 378 RHRQVMPLEDSKPSVAVDAWLAPSAALIGKVEVGSKASIWYGAVIRGDSGGVTIGEETNVQDDVVLSS---------GDVDIGKGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-WGGNPAKFLREVSPAEKSQLLKSAVEYVTLSQEH 869 RHR VM L KP V A++APSA++IG+V +G +S+WYG V+RGD G +++GE +N+QD V+ + IGK VT WGGNPA+FLR + P EKS ++ SA +Y L+ EH Sbjct: 38 RHRPVMNLSTRKPDVQPSAFVAPSASVIGQVTLGKNSSVWYGCVLRGDMGHISVGENSNLQDGTVVRTVATYLASRPAGTHIGKNVTVGHFATLNGCTIEDESLIGMGATLLEGVRVEKNAMVAAGAVVQPQTVVPSGEVWGGNPARFLRALKPEEKSFMVTSADKYAALAGEH 211
BLAST of mRNA_C-tenellus_contig976.2.2 vs. uniprot
Match: B6T923_MAIZE (Transcription factor APFI n=1 Tax=Zea mays TaxID=4577 RepID=B6T923_MAIZE) HSP 1 Score: 85.9 bits (211), Expect = 4.670e-16 Identity = 63/177 (35.59%), Postives = 83/177 (46.89%), Query Frame = 3 Query: 372 VSRHRQVMPLEDSKPSVAVDAWLAPSAALIGKVEVGSKASIWYGAVIRGDSGGVTIGEETNVQDDVVLS------SGDV---DIGKGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-WGGNPAKFLREVSPAEKSQLLKSAVEYVTLSQEHA 872 +SRHR +M + D P V DA++APSA+LIG V+VGS ASIWYG V+RGD+ + IG TN+QD+ ++ SG V IG VT WGGNPAKFLR+++ E S + +SA Y LS+ HA Sbjct: 27 ISRHRTIMNIFDKTPHVHKDAFVAPSASLIGDVQVGSGASIWYGCVLRGDANIIQIGSGTNIQDNSLIHVAKSNLSGKVFPTTIGNNVTVGHSAVLQGCTVEDEAFVGIGATLLDGVVVEKHGMVAAGALVRQNTRIPCGEVWGGNPAKFLRKLTDDEISFIAESAANYSNLSKVHA 203
BLAST of mRNA_C-tenellus_contig976.2.2 vs. uniprot
Match: K3XL18_SETIT (Uncharacterized protein n=12 Tax=Panicoideae TaxID=147369 RepID=K3XL18_SETIT) HSP 1 Score: 85.9 bits (211), Expect = 5.800e-16 Identity = 62/177 (35.03%), Postives = 85/177 (48.02%), Query Frame = 3 Query: 372 VSRHRQVMPLEDSKPSVAVDAWLAPSAALIGKVEVGSKASIWYGAVIRGDSGGVTIGEETNVQDDVVLS------SGDVD---IGKGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-WGGNPAKFLREVSPAEKSQLLKSAVEYVTLSQEHA 872 +SRHR +M + D P V DA++APSA+LIG V+VG ASIWYG V+RGD+ + IG TN+QD+ ++ SG V IG+ VT WGGNPAKFLR+++ E + + +SA Y +LS+EHA Sbjct: 39 ISRHRTLMNIFDKTPHVHRDAFVAPSASLIGDVQVGPGASIWYGCVLRGDANNIQIGSGTNIQDNSLVHVAKSNLSGKVFPTIIGENVTVGHSAVLQGCTIEDEAFVGMGATLLDGVIVEKHGMVAAGALVRQNTRIPSGEVWGGNPAKFLRKLTDDEIAFIAESAANYFSLSKEHA 215
BLAST of mRNA_C-tenellus_contig976.2.2 vs. uniprot
Match: A0A2P6TR65_CHLSO (Gamma carbonic anhydrase mitochondrial-like n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TR65_CHLSO) HSP 1 Score: 85.1 bits (209), Expect = 5.890e-16 Identity = 77/177 (43.50%), Postives = 102/177 (57.63%), Query Frame = 3 Query: 372 VSRHRQVMPLEDSKPSVAVDAWLAPSAALIGKVEVGSKASIWYGAVIRGDSGGVTIGEETNVQDDVVLS---------SGDVDIGKGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-WGGNPAKFLREVSPAEKSQLLKSAVEYVTLSQEHA 872 ++RHR + PL PS+ DA++APSAA+IG V +GS++S++YG+V+R D G +TIG+++NVQD V+ S D IG+ VT XXXXXXXXXXXXXXXXXX WGGNPA FLR++ P E + L +SA Y L+ EHA Sbjct: 33 LNRHRSLAPLLGKVPSLGRDAFVAPSAAVIGDVRLGSQSSVFYGSVVRADCGSITIGDKSNVQDGCVIRTAPAYLAGRSADTVIGREVTIGHQASLHGCTVGDRALVGMGATLLEGSEVEXXXXXXXXXXXXXXXXXXSGEIWGGNPAVFLRKLKPEEAAFLGESAEHYARLAAEHA 209 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig976.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig976.2.2 >prot_C-tenellus_contig976.2.2 ID=prot_C-tenellus_contig976.2.2|Name=mRNA_C-tenellus_contig976.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=210bp MAKTFMVEFHLLLLTFYLFHHIPGILSSFPPHPLIPFIVSRHRQVMPLEDback to top mRNA from alignment at C-tenellus_contig976:5227..8872- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig976.2.2 ID=mRNA_C-tenellus_contig976.2.2|Name=mRNA_C-tenellus_contig976.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3646bp|location=Sequence derived from alignment at C-tenellus_contig976:5227..8872- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig976:5227..8872- >mRNA_C-tenellus_contig976.2.2 ID=mRNA_C-tenellus_contig976.2.2|Name=mRNA_C-tenellus_contig976.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=630bp|location=Sequence derived from alignment at C-tenellus_contig976:5227..8872- (Choristocarpus tenellus KU2346)back to top |