mRNA_C-tenellus_contig9732.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9732.1.1 vs. uniprot
Match: A0A6H5L5R7_9PHAE (CCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5R7_9PHAE) HSP 1 Score: 138 bits (348), Expect = 5.330e-30 Identity = 77/98 (78.57%), Postives = 85/98 (86.73%), Query Frame = 3 Query: 417 AARGKPSVPGTGVIVGGG-KEGVGGG----DGERKLVGAYSPGARRQRIERFMQKREHRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMA 695 AARG+P V G G++VGGG + G+G G DGE+K VGAYSP ARRQRIERF++KRE RVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMA Sbjct: 579 AARGRPVVSGMGIMVGGGPRVGMGAGGAGADGEKKFVGAYSPEARRQRIERFLEKREKRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMA 676
BLAST of mRNA_C-tenellus_contig9732.1.1 vs. uniprot
Match: D8LRP7_ECTSI (CCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP7_ECTSI) HSP 1 Score: 135 bits (341), Expect = 4.790e-29 Identity = 76/98 (77.55%), Postives = 83/98 (84.69%), Query Frame = 3 Query: 417 AARGKPSVPGTGVIVGGG-KEGVGGG----DGERKLVGAYSPGARRQRIERFMQKREHRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMA 695 A RG+P V G G++VGGG + G+G G DGE+K VGAYSP ARRQRIERF+ KRE RVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMA Sbjct: 616 APRGRPVVSGMGIMVGGGPRVGMGAGGAGADGEKKFVGAYSPEARRQRIERFLDKREKRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMA 713
BLAST of mRNA_C-tenellus_contig9732.1.1 vs. uniprot
Match: A0A836CR31_9STRA (CCT motif-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR31_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.560e-26 Identity = 53/64 (82.81%), Postives = 61/64 (95.31%), Query Frame = 3 Query: 507 LVGAYSPGARRQRIERFMQKREHRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMAL 698 +VGAYSP +RR+R++RFM+KR HR+WTK VKYDVRKNFADTRMRVKGRFVKK+DEALLREVMAL Sbjct: 1 MVGAYSPESRRRRVQRFMEKRHHRIWTKTVKYDVRKNFADTRMRVKGRFVKKDDEALLREVMAL 64
BLAST of mRNA_C-tenellus_contig9732.1.1 vs. uniprot
Match: A0A835ZB50_9STRA (CCT motif-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB50_9STRA) HSP 1 Score: 112 bits (279), Expect = 4.860e-26 Identity = 54/64 (84.38%), Postives = 61/64 (95.31%), Query Frame = 3 Query: 507 LVGAYSPGARRQRIERFMQKREHRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMAL 698 LVGAYSP +RR+R+ERF++KR+HRVWTK VKYDVRKNFADTRMRVKGRFVKK+DEALLREVM L Sbjct: 2 LVGAYSPESRRRRLERFLEKRKHRVWTKTVKYDVRKNFADTRMRVKGRFVKKDDEALLREVMTL 65
BLAST of mRNA_C-tenellus_contig9732.1.1 vs. uniprot
Match: A0A7S2WW68_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW68_9STRA) HSP 1 Score: 109 bits (272), Expect = 9.580e-23 Identity = 57/78 (73.08%), Postives = 67/78 (85.90%), Query Frame = 3 Query: 468 GKEGVGGGDGERK-LVGAYSPGARRQRIERFMQKREHRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMAL 698 G G GGD ERK +GAYSP ARR+RI+RF++KR+ RVWTK VKYDVRKNFAD+RMRVKGRFVKKEDE LLRE+M++ Sbjct: 183 GVPGATGGDPERKHFIGAYSPEARRKRIQRFLEKRKKRVWTKKVKYDVRKNFADSRMRVKGRFVKKEDEELLRELMSI 260
BLAST of mRNA_C-tenellus_contig9732.1.1 vs. uniprot
Match: A0A7S1D0Z6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0Z6_CYCTE) HSP 1 Score: 104 bits (259), Expect = 2.130e-21 Identity = 50/63 (79.37%), Postives = 58/63 (92.06%), Query Frame = 3 Query: 510 VGAYSPGARRQRIERFMQKREHRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMAL 698 VGAYSP +R+ RIERFM+KR HRVWTK VKYDVRKNFAD+R+RVKGRFVKKEDE L+RE+M+L Sbjct: 161 VGAYSPESRKLRIERFMEKRNHRVWTKSVKYDVRKNFADSRLRVKGRFVKKEDELLMRELMSL 223
BLAST of mRNA_C-tenellus_contig9732.1.1 vs. uniprot
Match: A0A7S2WWC9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWC9_9STRA) HSP 1 Score: 109 bits (272), Expect = 3.000e-21 Identity = 57/78 (73.08%), Postives = 67/78 (85.90%), Query Frame = 3 Query: 468 GKEGVGGGDGERK-LVGAYSPGARRQRIERFMQKREHRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMAL 698 G G GGD ERK +GAYSP ARR+RI+RF++KR+ RVWTK VKYDVRKNFAD+RMRVKGRFVKKEDE LLRE+M++ Sbjct: 396 GVPGATGGDPERKHFIGAYSPEARRKRIQRFLEKRKKRVWTKKVKYDVRKNFADSRMRVKGRFVKKEDEELLRELMSI 473
BLAST of mRNA_C-tenellus_contig9732.1.1 vs. uniprot
Match: A0A7S2P995_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P995_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.180e-20 Identity = 47/63 (74.60%), Postives = 59/63 (93.65%), Query Frame = 3 Query: 510 VGAYSPGARRQRIERFMQKREHRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMAL 698 +GAYSP AR+QRI +F+QKR+HRVWTK VKYDVRKNFAD+R+RVKGRFVKKEDE L+R++++L Sbjct: 156 IGAYSPEARKQRITKFLQKRKHRVWTKKVKYDVRKNFADSRLRVKGRFVKKEDELLMRDLISL 218
BLAST of mRNA_C-tenellus_contig9732.1.1 vs. uniprot
Match: D8LYG5_BLAHO (CCT domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LYG5_BLAHO) HSP 1 Score: 102 bits (253), Expect = 3.480e-20 Identity = 48/70 (68.57%), Postives = 61/70 (87.14%), Query Frame = 3 Query: 489 GDGERKLVGAYSPGARRQRIERFMQKREHRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMAL 698 G+ ++K +G YSP AR++R++RF +KR+ RVWTK VKYDVRKNFAD+R+RVKGRFVKKEDE LLRE+M L Sbjct: 196 GETQKKYIGMYSPEARKKRVQRFFEKRKQRVWTKKVKYDVRKNFADSRLRVKGRFVKKEDEELLRELMNL 265
BLAST of mRNA_C-tenellus_contig9732.1.1 vs. uniprot
Match: A0A7S2RFW1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFW1_9STRA) HSP 1 Score: 101 bits (251), Expect = 6.000e-20 Identity = 48/63 (76.19%), Postives = 57/63 (90.48%), Query Frame = 3 Query: 510 VGAYSPGARRQRIERFMQKREHRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMAL 698 VGAYSP +R+ RIERF+ KR HRVWTK VKYDVRKNFAD+R+RVKGRFVKKEDE L+R++M+L Sbjct: 200 VGAYSPDSRKIRIERFLNKRNHRVWTKKVKYDVRKNFADSRLRVKGRFVKKEDELLMRDLMSL 262 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9732.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9732.1.1 >prot_C-tenellus_contig9732.1.1 ID=prot_C-tenellus_contig9732.1.1|Name=mRNA_C-tenellus_contig9732.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=181bp MSGGGASNTVGTRAGTSGSAVGGTGACGTEASAGQGAITPATSGVGLHLRback to top mRNA from alignment at C-tenellus_contig9732:1734..5700- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9732.1.1 ID=mRNA_C-tenellus_contig9732.1.1|Name=mRNA_C-tenellus_contig9732.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3967bp|location=Sequence derived from alignment at C-tenellus_contig9732:1734..5700- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9732:1734..5700- >mRNA_C-tenellus_contig9732.1.1 ID=mRNA_C-tenellus_contig9732.1.1|Name=mRNA_C-tenellus_contig9732.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=543bp|location=Sequence derived from alignment at C-tenellus_contig9732:1734..5700- (Choristocarpus tenellus KU2346)back to top |